RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C BNA5Q05979 453 aa3.73□□□□□ -1.81
CCL1YPR025C YDL009CQ12210 107 aa3.73□□□□□ -1.81
CCL1YPR025C RTN2Q12443 393 aa3.73□□□□□ -1.81
CCL1YPR025C GLK1P17709 500 aaKnown RBP3.72□□□□□ -1.81
CCL1YPR025C YCR007CP25354 239 aa3.72□□□□□ -1.81
CCL1YPR025C PRO3P32263 286 aaKnown RBP3.72□□□□□ -1.81
CCL1YPR025C SEC66P33754 206 aa3.72□□□□□ -1.81
CCL1YPR025C FMP46P36141 133 aaKnown RBP3.72□□□□□ -1.81
CCL1YPR025C NOC2P39744 710 aaKnown RBP3.72□□□□□ -1.81
CCL1YPR025C IRC15Q02733 499 aa3.72□□□□□ -1.81
CCL1YPR025C RPM2Q02773 1202 aa3.72□□□□□ -1.81
CCL1YPR025C RBS1Q05672 457 aaKnown RBP3.72□□□□□ -1.81
CCL1YPR025C CFT2Q12102 859 aaPredicted RBP3.72□□□□□ -1.81
CCL1YPR025C RRG1Q12167 365 aaPredicted RBP3.72□□□□□ -1.81
CCL1YPR025C LSP1Q12230 341 aaKnown RBP3.72□□□□□ -1.81
CCL1YPR025C MTF1P14908 341 aaKnown RBP3.71□□□□□ -1.82
CCL1YPR025C FUR1P18562 216 aaKnown RBP3.71□□□□□ -1.82
CCL1YPR025C EXO70P19658 623 aa3.71□□□□□ -1.82
CCL1YPR025C FUN19P28003 413 aaPredicted RBP3.71□□□□□ -1.82
CCL1YPR025C AFG1P32317 509 aa3.71□□□□□ -1.82
CCL1YPR025C ERG3P32353 365 aa3.71□□□□□ -1.82
CCL1YPR025C YFR016CP43597 1233 aaKnown RBP3.71□□□□□ -1.82
CCL1YPR025C RTT101P47050 842 aa3.71□□□□□ -1.82
CCL1YPR025C OCA1P50946 238 aaPredicted RBP3.71□□□□□ -1.82
CCL1YPR025C YGL108CP53139 140 aa3.71□□□□□ -1.82
CCL1YPR025C SLG1P54867 378 aa3.71□□□□□ -1.82
CCL1YPR025C YMR155WQ03795 547 aa3.71□□□□□ -1.82
CCL1YPR025C TAP42Q04372 366 aa3.71□□□□□ -1.82
CCL1YPR025C YOL159C-AQ3E769 90 aa3.71□□□□□ -1.82
CCL1YPR025C RPL15AP05748 204 aaKnown RBP3.7□□□□□ -1.82
CCL1YPR025C RPL3P14126 387 aaKnown RBP3.7□□□□□ -1.82
CCL1YPR025C PPH22P23595 377 aa3.7□□□□□ -1.82
CCL1YPR025C YCR022CP25620 114 aa3.7□□□□□ -1.82
CCL1YPR025C IDH2P28241 369 aaKnown RBP3.7□□□□□ -1.82
CCL1YPR025C RAD14P28519 371 aa3.7□□□□□ -1.82
CCL1YPR025C ATP11P32453 318 aa3.7□□□□□ -1.82
CCL1YPR025C SAS3P34218 831 aa3.7□□□□□ -1.82
CCL1YPR025C MTC4P38335 694 aaKnown RBP3.7□□□□□ -1.82
CCL1YPR025C OTU2P38747 307 aaKnown RBP3.7□□□□□ -1.82
CCL1YPR025C DHH1P39517 506 aaKnown RBP3.7□□□□□ -1.82
CCL1YPR025C SYG1P40528 902 aa3.7□□□□□ -1.82
CCL1YPR025C YGR149WP48236 432 aa3.7□□□□□ -1.82
CCL1YPR025C HCR1Q05775 265 aaKnown RBP3.7□□□□□ -1.82
CCL1YPR025C VPS74Q06385 345 aa3.7□□□□□ -1.82
CCL1YPR025C AYT1Q12226 474 aa3.7□□□□□ -1.82
CCL1YPR025C RKM5Q12367 367 aa3.7□□□□□ -1.82
CCL1YPR025C SET6Q12529 373 aa3.7□□□□□ -1.82
CCL1YPR025C PGA3Q12746 312 aaKnown RBP3.7□□□□□ -1.82
CCL1YPR025C SPB1P25582 841 aaPredicted RBP3.69□□□□□ -1.82
CCL1YPR025C BUB3P26449 341 aa3.69□□□□□ -1.82
CCL1YPR025C SPC110P32380 944 aa3.69□□□□□ -1.82
CCL1YPR025C NPL6P32832 435 aa3.69□□□□□ -1.82
CCL1YPR025C SHO1P40073 367 aa3.69□□□□□ -1.82
CCL1YPR025C YMR147WP40218 223 aaKnown RBP3.69□□□□□ -1.82
CCL1YPR025C RPR2P40571 144 aa3.69□□□□□ -1.82
CCL1YPR025C GPD2P41911 440 aaKnown RBP3.69□□□□□ -1.82
CCL1YPR025C SCM3Q12334 223 aa3.69□□□□□ -1.82
CCL1YPR025C YMR230W-AQ3E7B5 62 aa3.69□□□□□ -1.82
CCL1YPR025C RHO2P06781 192 aa3.68□□□□□ -1.82
CCL1YPR025C ATP10P18496 279 aa3.68□□□□□ -1.82
CCL1YPR025C THI2P38141 450 aa3.68□□□□□ -1.82
CCL1YPR025C MDM31P38880 579 aa3.68□□□□□ -1.82
CCL1YPR025C RPH1P39956 796 aa3.68□□□□□ -1.82
CCL1YPR025C ELP2P42935 788 aa3.68□□□□□ -1.82
CCL1YPR025C URB2P47108 1174 aa3.68□□□□□ -1.82
CCL1YPR025C ERP1Q05359 219 aaKnown RBP3.68□□□□□ -1.82
CCL1YPR025C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
CCL1YPR025C KEL3Q08979 651 aaPredicted RBP3.68□□□□□ -1.82
CCL1YPR025C SFI1Q12369 946 aa3.68□□□□□ -1.82
CCL1YPR025C LEU4P06208 619 aaKnown RBP3.67□□□□□ -1.82
CCL1YPR025C GDH1P07262 454 aaKnown RBP3.67□□□□□ -1.82
CCL1YPR025C CLB3P24870 427 aa3.67□□□□□ -1.82
CCL1YPR025C HXT3P32466 567 aaKnown RBP3.67□□□□□ -1.82
CCL1YPR025C MFT1P33441 392 aaKnown RBP3.67□□□□□ -1.82
CCL1YPR025C RSM22P36056 628 aa3.67□□□□□ -1.82
CCL1YPR025C BYE1P36106 594 aa3.67□□□□□ -1.82
CCL1YPR025C CBP4P37267 147 aa3.67□□□□□ -1.82
CCL1YPR025C RMD9P53140 646 aaKnown RBP3.67□□□□□ -1.82
CCL1YPR025C MNP1P53163 194 aaPredicted RBP3.67□□□□□ -1.82
CCL1YPR025C VTA1Q06263 330 aa3.67□□□□□ -1.82
CCL1YPR025C CYB2P00175 591 aa3.66□□□□□ -1.82
CCL1YPR025C RPL20AP0CX23 172 aaKnown RBP3.66□□□□□ -1.82
CCL1YPR025C RPL20BP0CX24 172 aaPredicted RBP3.66□□□□□ -1.82
CCL1YPR025C NOP1P15646 327 aaKnown RBP3.66□□□□□ -1.82
CCL1YPR025C MCK1P21965 375 aaKnown RBP3.66□□□□□ -1.82
CCL1YPR025C YIM1P28625 365 aa3.66□□□□□ -1.82
CCL1YPR025C LOS1P33418 1100 aaPredicted RBP3.66□□□□□ -1.82
CCL1YPR025C FRE2P36033 711 aa3.66□□□□□ -1.82
CCL1YPR025C HAT2P39984 401 aa3.66□□□□□ -1.82
CCL1YPR025C FAU1P40099 211 aa3.66□□□□□ -1.82
CCL1YPR025C VMA13P41807 478 aaKnown RBP3.66□□□□□ -1.82
CCL1YPR025C DLD2P46681 530 aaKnown RBP3.66□□□□□ -1.82
CCL1YPR025C GWT1P47026 490 aa3.66□□□□□ -1.82
CCL1YPR025C RPA49Q01080 415 aaPredicted RBP3.66□□□□□ -1.82
CCL1YPR025C SPC19Q03954 165 aa3.66□□□□□ -1.82
CCL1YPR025C PPT2Q12036 173 aa3.66□□□□□ -1.82
CCL1YPR025C PHO2P07269 559 aa3.65□□□□□ -1.83
CCL1YPR025C SPS4P09937 338 aa3.65□□□□□ -1.83
CCL1YPR025C HCS1P34243 683 aa3.65□□□□□ -1.83
CCL1YPR025C PMU1P36069 295 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms