RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	TVP15	Q03860	143 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	MTQ2	Q03920	221 aa	Predicted RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	CTK1	Q03957	528 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	DIC1	Q06143	298 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	HDA3	Q06623	655 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	TMA46	Q12000	345 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	LEU9	Q12166	604 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	YOR114W	Q12219	294 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	ATG34	Q12292	412 aa		5.19	□□□□□ -1.58
CBC2	YPL178W	HRP1	Q99383	534 aa	Known RBP	5.19	□□□□□ -1.58
CBC2	YPL178W	COS2	P0CX12	379 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	COS3	P0CX13	379 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	KIN2	P13186	1147 aa	Known RBP	5.18	□□□□□ -1.58
CBC2	YPL178W	TYR1	P20049	452 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	HOP1	P20050	605 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	BUB3	P26449	341 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	DEP1	P31385	405 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	NTH1	P32356	751 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	VPS21	P36017	210 aa	Known RBP	5.18	□□□□□ -1.58
CBC2	YPL178W	BMT2	P38278	337 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	AXL2	P38928	823 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	SEC31	P38968	1273 aa	Known RBP	5.18	□□□□□ -1.58
CBC2	YPL178W	ARB1	P40024	610 aa	Known RBP	5.18	□□□□□ -1.58
CBC2	YPL178W	CAB2	P40506	365 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	FKH2	P41813	862 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	TDA10	P42938	290 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	COS4	P43542	379 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	MET12	P46151	657 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	MAD3	P47074	515 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	ESF2	P53743	316 aa	Known RBP	5.18	□□□□□ -1.58
CBC2	YPL178W	AAT1	Q01802	451 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	STP3	Q05937	343 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	RAD34	Q06665	692 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	ENT4	Q07872	247 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	YDR061W	Q12298	539 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
CBC2	YPL178W	SEC39	Q12745	709 aa		5.18	□□□□□ -1.58
CBC2	YPL178W	IRA2	P19158	3079 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	GAL4	P04386	881 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	SPT3	P06844	337 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	PBS2	P08018	668 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	MCM1	P11746	286 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	CDC10	P25342	322 aa	Known RBP	5.17	□□□□□ -1.58
CBC2	YPL178W	RNQ1	P25367	405 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	SPS22	P25380	463 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	RPC82	P32349	654 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	HXT4	P32467	576 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	YSC84	P32793	468 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	WBP1	P33767	430 aa	Known RBP	5.17	□□□□□ -1.58
CBC2	YPL178W	HES1	P35843	434 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	FMP46	P36141	133 aa	Known RBP	5.17	□□□□□ -1.58
CBC2	YPL178W	RRN10	P38204	145 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	EHT1	P38295	451 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	MED8	P38304	223 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	LEU5	P38702	357 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	YDR089W	P38966	869 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	GGC1	P38988	300 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	HXT6	P39003	570 aa	Known RBP	5.17	□□□□□ -1.58
CBC2	YPL178W	HXT7	P39004	570 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	MNT3	P40549	630 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	MAD2	P40958	196 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	GCD10	P41814	478 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	YFR020W	P43600	232 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	STB2	P46679	850 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	MRM2	P53123	320 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	ERG26	P53199	349 aa	Known RBP	5.17	□□□□□ -1.58
CBC2	YPL178W	YNL140C	P53910	189 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	SHE9	Q04172	456 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	RRP45	Q05636	305 aa	Known RBP	5.17	□□□□□ -1.58
CBC2	YPL178W	YLR030W	Q07967	263 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	YLR049C	Q12110	428 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	YOL107W	Q12239	342 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	STB3	Q12427	513 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	YLR111W	Q12528	110 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	YCL012C	Q8J0M4	134 aa		5.17	□□□□□ -1.58
CBC2	YPL178W	PNO1	Q99216	274 aa	Known RBP	5.17	□□□□□ -1.58
CBC2	YPL178W	CYR1	P08678	2026 aa	Known RBP	5.16	□□□□□ -1.58
CBC2	YPL178W	TRP3	P00937	484 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	GAL7	P08431	366 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	RPS4A	P0CX35	261 aa	Known RBP	5.16	□□□□□ -1.58
CBC2	YPL178W	RPS4B	P0CX36	261 aa	Known RBP	5.16	□□□□□ -1.58
CBC2	YPL178W	DAL82	P21705	255 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	SGV1	P23293	657 aa	Known RBP	5.16	□□□□□ -1.58
CBC2	YPL178W	BUB2	P26448	306 aa	Predicted RBP	5.16	□□□□□ -1.58
CBC2	YPL178W	ADE1	P27616	306 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	FUN30	P31380	1131 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	SRB5	P32585	307 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	TAF14	P35189	244 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	RMA1	P36001	430 aa	Known RBP	5.16	□□□□□ -1.58
CBC2	YPL178W	APT2	P36973	181 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	YCR087C-A	P37263	153 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	HSM3	P38348	480 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	YHR112C	P38716	378 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	PLB1	P39105	664 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	APQ12	P40532	138 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	CFD1	P40558	293 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	UBP6	P43593	499 aa	Known RBP	5.16	□□□□□ -1.58
CBC2	YPL178W	YJR154W	P47181	346 aa		5.16	□□□□□ -1.58
CBC2	YPL178W	YPT32	P51996	222 aa	Known RBP	5.16	□□□□□ -1.58
CBC2	YPL178W	CUS2	P53830	285 aa	Predicted RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 87.7 ms