RNA–Protein interactions for RNA: YOL080C

REX4, Transcript of Putative RNA exonuclease, yeast

Gene REX4, Length 870 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REX4	YOL080C	SIP4	P46954	829 aa		4.07	□□□□□ -1.76
REX4	YOL080C	URB2	P47108	1174 aa		4.07	□□□□□ -1.76
REX4	YOL080C	LYS4	P49367	693 aa	Predicted RBP	4.07	□□□□□ -1.76
REX4	YOL080C	CUL3	P53202	744 aa		4.07	□□□□□ -1.76
REX4	YOL080C	SOL4	P53315	255 aa		4.07	□□□□□ -1.76
REX4	YOL080C	RTC4	P53850	401 aa		4.07	□□□□□ -1.76
REX4	YOL080C	REX2	P54964	269 aa	Known RBP	4.07	□□□□□ -1.76
REX4	YOL080C	EGD1	Q02642	157 aa	Known RBP	4.07	□□□□□ -1.76
REX4	YOL080C	RAD30	Q04049	632 aa		4.07	□□□□□ -1.76
REX4	YOL080C	EMI2	Q04409	500 aa	Known RBP	4.07	□□□□□ -1.76
REX4	YOL080C	RNH1	Q04740	348 aa		4.07	□□□□□ -1.76
REX4	YOL080C	MDM36	Q06820	579 aa		4.07	□□□□□ -1.76
REX4	YOL080C	BRX1	Q08235	291 aa	Known RBP	4.07	□□□□□ -1.76
REX4	YOL080C	RPS10A	Q08745	105 aa	Predicted RBP	4.07	□□□□□ -1.76
REX4	YOL080C	ATP16	Q12165	160 aa		4.07	□□□□□ -1.76
REX4	YOL080C	TIP41	Q12199	356 aa		4.07	□□□□□ -1.76
REX4	YOL080C	IRC20	Q06554	1556 aa		4.06	□□□□□ -1.76
REX4	YOL080C	DRS2	P39524	1355 aa		4.06	□□□□□ -1.76
REX4	YOL080C	INH1	P01097	85 aa		4.06	□□□□□ -1.76
REX4	YOL080C	BMH1	P29311	267 aa	Known RBP	4.06	□□□□□ -1.76
REX4	YOL080C	ITR2	P30606	609 aa		4.06	□□□□□ -1.76
REX4	YOL080C	MCM4	P30665	933 aa	Known RBP	4.06	□□□□□ -1.76
REX4	YOL080C	PAH1	P32567	862 aa		4.06	□□□□□ -1.76
REX4	YOL080C	VPS51	P36116	164 aa		4.06	□□□□□ -1.76
REX4	YOL080C	SRL3	P36167	246 aa		4.06	□□□□□ -1.76
REX4	YOL080C	YSW1	P38280	609 aa		4.06	□□□□□ -1.76
REX4	YOL080C	RRF1	P38771	230 aa		4.06	□□□□□ -1.76
REX4	YOL080C	VMA22	P38784	181 aa		4.06	□□□□□ -1.76
REX4	YOL080C	YNG2	P38806	282 aa	Known RBP	4.06	□□□□□ -1.76
REX4	YOL080C	UBA4	P38820	440 aa		4.06	□□□□□ -1.76
REX4	YOL080C	KEL1	P38853	1164 aa	Known RBP	4.06	□□□□□ -1.76
REX4	YOL080C	CCT4	P39078	528 aa	Known RBP	4.06	□□□□□ -1.76
REX4	YOL080C	ELO1	P39540	310 aa		4.06	□□□□□ -1.76
REX4	YOL080C	RSM25	P40496	264 aa		4.06	□□□□□ -1.76
REX4	YOL080C	RPS10B	P46784	105 aa	Known RBP	4.06	□□□□□ -1.76
REX4	YOL080C	ALB1	P47019	175 aa	Predicted RBP	4.06	□□□□□ -1.76
REX4	YOL080C	DIA3	P52290	468 aa		4.06	□□□□□ -1.76
REX4	YOL080C	ORM1	P53224	222 aa		4.06	□□□□□ -1.76
REX4	YOL080C	DYN3	Q04949	312 aa		4.06	□□□□□ -1.76
REX4	YOL080C	SPT6	P23615	1451 aa	Known RBP	4.05	□□□□□ -1.76
REX4	YOL080C	YRF1-4	O13559	1382 aa		4.05	□□□□□ -1.76
REX4	YOL080C	MRPL8	P22353	238 aa		4.05	□□□□□ -1.76
REX4	YOL080C	VMA16	P23968	213 aa		4.05	□□□□□ -1.76
REX4	YOL080C	MEI4	P29467	408 aa		4.05	□□□□□ -1.76
REX4	YOL080C	NIP1	P32497	812 aa	Known RBP	4.05	□□□□□ -1.76
REX4	YOL080C	VPH1	P32563	840 aa	Known RBP	4.05	□□□□□ -1.76
REX4	YOL080C	PXA2	P34230	853 aa		4.05	□□□□□ -1.76
REX4	YOL080C	PHD1	P36093	366 aa		4.05	□□□□□ -1.76
REX4	YOL080C	GDT1	P38301	280 aa	Predicted RBP	4.05	□□□□□ -1.76
REX4	YOL080C	TSC10	P38342	320 aa		4.05	□□□□□ -1.76
REX4	YOL080C	STP2	P38704	541 aa		4.05	□□□□□ -1.76
REX4	YOL080C	DBP8	P38719	431 aa		4.05	□□□□□ -1.76
REX4	YOL080C	RGI2	P40188	164 aa		4.05	□□□□□ -1.76
REX4	YOL080C	YJL070C	P40361	888 aa		4.05	□□□□□ -1.76
REX4	YOL080C	GPD2	P41911	440 aa	Known RBP	4.05	□□□□□ -1.76
REX4	YOL080C	ARC1	P46672	376 aa	Known RBP	4.05	□□□□□ -1.76
REX4	YOL080C	YSA1	Q01976	231 aa		4.05	□□□□□ -1.76
REX4	YOL080C	RVB1	Q03940	463 aa	Known RBP	4.05	□□□□□ -1.76
REX4	YOL080C	VPS20	Q04272	221 aa		4.05	□□□□□ -1.76
REX4	YOL080C	MMR1	Q06324	491 aa		4.05	□□□□□ -1.76
REX4	YOL080C	ATG17	Q06410	417 aa		4.05	□□□□□ -1.76
REX4	YOL080C	HUA2	Q12134	243 aa		4.05	□□□□□ -1.76
REX4	YOL080C	SCM3	Q12334	223 aa		4.05	□□□□□ -1.76
REX4	YOL080C	MED4	Q12343	284 aa		4.05	□□□□□ -1.76
REX4	YOL080C	YMR230W-A	Q3E7B5	62 aa		4.05	□□□□□ -1.76
REX4	YOL080C	XRN1	P22147	1528 aa	Known RBP	4.05	□□□□□ -1.76
REX4	YOL080C	YCR016W	P25617	290 aa	Known RBP	4.04	□□□□□ -1.76
REX4	YOL080C	DAL80	P26343	269 aa		4.04	□□□□□ -1.76
REX4	YOL080C	ITR1	P30605	584 aa		4.04	□□□□□ -1.76
REX4	YOL080C	SSE1	P32589	693 aa	Known RBP	4.04	□□□□□ -1.76
REX4	YOL080C	RGT1	P32862	1170 aa		4.04	□□□□□ -1.76
REX4	YOL080C	UBC6	P33296	250 aa	Predicted RBP	4.04	□□□□□ -1.76
REX4	YOL080C	ATP3	P38077	311 aa	Known RBP	4.04	□□□□□ -1.76
REX4	YOL080C	RIM2	P38127	377 aa		4.04	□□□□□ -1.76
REX4	YOL080C	MAL33	P38157	468 aa		4.04	□□□□□ -1.76
REX4	YOL080C	YBL029W	P38201	376 aa		4.04	□□□□□ -1.76
REX4	YOL080C	RXT2	P38255	430 aa		4.04	□□□□□ -1.76
REX4	YOL080C	APE4	P38821	490 aa		4.04	□□□□□ -1.76
REX4	YOL080C	APS3	P47064	194 aa		4.04	□□□□□ -1.76
REX4	YOL080C	CGR1	P53188	120 aa		4.04	□□□□□ -1.76
REX4	YOL080C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
REX4	YOL080C	CIK1	Q01649	594 aa		4.04	□□□□□ -1.76
REX4	YOL080C	PLP1	Q04004	230 aa		4.04	□□□□□ -1.76
REX4	YOL080C	YTH1	Q06102	208 aa	Predicted RBP	4.04	□□□□□ -1.76
REX4	YOL080C	ECM30	Q06673	1274 aa		4.04	□□□□□ -1.76
REX4	YOL080C	RTT109	Q07794	436 aa		4.04	□□□□□ -1.76
REX4	YOL080C	TEN1	Q07921	160 aa		4.04	□□□□□ -1.76
REX4	YOL080C	LOT6	Q07923	191 aa		4.04	□□□□□ -1.76
REX4	YOL080C	TCO89	Q08921	799 aa		4.04	□□□□□ -1.76
REX4	YOL080C	GEA1	P47102	1408 aa	Predicted RBP	4.04	□□□□□ -1.76
REX4	YOL080C	FOB1	O13329	566 aa		4.03	□□□□□ -1.76
REX4	YOL080C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
REX4	YOL080C	ARG81	P05085	880 aa		4.03	□□□□□ -1.76
REX4	YOL080C	PHO2	P07269	559 aa		4.03	□□□□□ -1.76
REX4	YOL080C	VPS3	P23643	1011 aa		4.03	□□□□□ -1.76
REX4	YOL080C	KRE2	P27809	442 aa		4.03	□□□□□ -1.76
REX4	YOL080C	VPH2	P32341	215 aa		4.03	□□□□□ -1.76
REX4	YOL080C	ERG1	P32476	496 aa	Known RBP	4.03	□□□□□ -1.76
REX4	YOL080C	RAD5	P32849	1169 aa	Predicted RBP	4.03	□□□□□ -1.76
REX4	YOL080C	CSE1	P33307	960 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 85 ms