RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A YDL218WQ07629 317 aa3.55□□□□□ -1.84
YSF3YNL138W-A PSR1Q07800 427 aa3.55□□□□□ -1.84
YSF3YNL138W-A APL4Q12028 832 aa3.55□□□□□ -1.84
YSF3YNL138W-A PDH1Q12428 516 aaKnown RBP3.55□□□□□ -1.84
YSF3YNL138W-A COQ1P18900 473 aa3.54□□□□□ -1.84
YSF3YNL138W-A PDB1P32473 366 aaKnown RBP3.54□□□□□ -1.84
YSF3YNL138W-A BUD2P33314 1104 aa3.54□□□□□ -1.84
YSF3YNL138W-A MIA40P36046 403 aa3.54□□□□□ -1.84
YSF3YNL138W-A MAL33P38157 468 aa3.54□□□□□ -1.84
YSF3YNL138W-A DIA4P38705 446 aaPredicted RBP3.54□□□□□ -1.84
YSF3YNL138W-A UIP3P39547 235 aa3.54□□□□□ -1.84
YSF3YNL138W-A YIL169CP40442 995 aa3.54□□□□□ -1.84
YSF3YNL138W-A ALT2P52892 507 aa3.54□□□□□ -1.84
YSF3YNL138W-A TDA9Q04545 1251 aa3.54□□□□□ -1.84
YSF3YNL138W-A YOR111WQ99210 232 aa3.54□□□□□ -1.84
YSF3YNL138W-A RPS19AP07280 144 aaKnown RBP3.53□□□□□ -1.84
YSF3YNL138W-A RPS19BP07281 144 aaPredicted RBP3.53□□□□□ -1.84
YSF3YNL138W-A MGR1P25573 417 aa3.53□□□□□ -1.84
YSF3YNL138W-A PGS1P25578 521 aa3.53□□□□□ -1.84
YSF3YNL138W-A YKL050CP35736 922 aa3.53□□□□□ -1.84
YSF3YNL138W-A TCD2P36101 447 aaKnown RBP3.53□□□□□ -1.84
YSF3YNL138W-A MIC60P36112 540 aa3.53□□□□□ -1.84
YSF3YNL138W-A YNG2P38806 282 aaKnown RBP3.53□□□□□ -1.84
YSF3YNL138W-A PCF11P39081 626 aaPredicted RBP3.53□□□□□ -1.84
YSF3YNL138W-A PES4P39684 611 aa3.53□□□□□ -1.84
YSF3YNL138W-A HMF1P40037 129 aaKnown RBP3.53□□□□□ -1.84
YSF3YNL138W-A DIA3P52290 468 aa3.53□□□□□ -1.84
YSF3YNL138W-A PKP2P53170 491 aa3.53□□□□□ -1.84
YSF3YNL138W-A YNL181WP53878 407 aa3.53□□□□□ -1.84
YSF3YNL138W-A BET4Q00618 327 aa3.53□□□□□ -1.84
YSF3YNL138W-A SMA1Q02651 245 aa3.53□□□□□ -1.84
YSF3YNL138W-A NUP53Q03790 475 aa3.53□□□□□ -1.84
YSF3YNL138W-A YMR254CQ04838 102 aa3.53□□□□□ -1.84
YSF3YNL138W-A ATG26Q06321 1198 aa3.53□□□□□ -1.84
YSF3YNL138W-A TCO89Q08921 799 aa3.53□□□□□ -1.84
YSF3YNL138W-A APL5Q08951 932 aaKnown RBP3.53□□□□□ -1.84
YSF3YNL138W-A PKH2Q12236 1081 aaKnown RBP3.53□□□□□ -1.84
YSF3YNL138W-A CDC16P09798 840 aa3.52□□□□□ -1.85
YSF3YNL138W-A RPL19AP0CX82 189 aaKnown RBP3.52□□□□□ -1.85
YSF3YNL138W-A RPL19BP0CX83 189 aaPredicted RBP3.52□□□□□ -1.85
YSF3YNL138W-A GAC1P28006 793 aa3.52□□□□□ -1.85
YSF3YNL138W-A YPK3P38070 525 aa3.52□□□□□ -1.85
YSF3YNL138W-A ELO1P39540 310 aa3.52□□□□□ -1.85
YSF3YNL138W-A LSB1P53281 241 aa3.52□□□□□ -1.85
YSF3YNL138W-A CTL1Q03220 320 aaKnown RBP3.52□□□□□ -1.85
YSF3YNL138W-A YKU80Q04437 629 aa3.52□□□□□ -1.85
YSF3YNL138W-A RPS10AQ08745 105 aaPredicted RBP3.52□□□□□ -1.85
YSF3YNL138W-A PLP2Q12017 286 aa3.52□□□□□ -1.85
YSF3YNL138W-A YDR056CQ12025 205 aa3.52□□□□□ -1.85
YSF3YNL138W-A ADE4P04046 510 aaKnown RBP3.51□□□□□ -1.85
YSF3YNL138W-A MAS1P10507 462 aa3.51□□□□□ -1.85
YSF3YNL138W-A KAR3P17119 729 aa3.51□□□□□ -1.85
YSF3YNL138W-A YCK1P23291 538 aa3.51□□□□□ -1.85
YSF3YNL138W-A VMA16P23968 213 aa3.51□□□□□ -1.85
YSF3YNL138W-A AUR1P36107 401 aaPredicted RBP3.51□□□□□ -1.85
YSF3YNL138W-A DUG2P38149 878 aa3.51□□□□□ -1.85
YSF3YNL138W-A TSC10P38342 320 aa3.51□□□□□ -1.85
YSF3YNL138W-A EFM2P38347 419 aa3.51□□□□□ -1.85
YSF3YNL138W-A YND1P40009 630 aa3.51□□□□□ -1.85
YSF3YNL138W-A RTS2P40962 232 aa3.51□□□□□ -1.85
YSF3YNL138W-A RPS10BP46784 105 aaKnown RBP3.51□□□□□ -1.85
YSF3YNL138W-A LCL3P53153 274 aa3.51□□□□□ -1.85
YSF3YNL138W-A NUP100Q02629 959 aa3.51□□□□□ -1.85
YSF3YNL138W-A GRC3Q07845 632 aa3.51□□□□□ -1.85
YSF3YNL138W-A DAL5P15365 543 aa3.5□□□□□ -1.85
YSF3YNL138W-A HNM1P19807 563 aa3.5□□□□□ -1.85
YSF3YNL138W-A KGD1P20967 1014 aaKnown RBP3.5□□□□□ -1.85
YSF3YNL138W-A POL4P25615 582 aa3.5□□□□□ -1.85
YSF3YNL138W-A MYO3P36006 1272 aa3.5□□□□□ -1.85
YSF3YNL138W-A AGP2P38090 596 aa3.5□□□□□ -1.85
YSF3YNL138W-A DBP8P38719 431 aa3.5□□□□□ -1.85
YSF3YNL138W-A PHO90P39535 881 aa3.5□□□□□ -1.85
YSF3YNL138W-A FET5P43561 622 aa3.5□□□□□ -1.85
YSF3YNL138W-A YGL242CP53066 181 aa3.5□□□□□ -1.85
YSF3YNL138W-A DUO1P53168 247 aaKnown RBP3.5□□□□□ -1.85
YSF3YNL138W-A SLG1P54867 378 aa3.5□□□□□ -1.85
YSF3YNL138W-A FMP42Q04991 504 aa3.5□□□□□ -1.85
YSF3YNL138W-A TEN1Q07921 160 aa3.5□□□□□ -1.85
YSF3YNL138W-A RDR1Q08904 546 aa3.5□□□□□ -1.85
YSF3YNL138W-A BSC1Q12140 328 aa3.5□□□□□ -1.85
YSF3YNL138W-A LEU9Q12166 604 aaKnown RBP3.5□□□□□ -1.85
YSF3YNL138W-A YBR126W-AQ8TGU7 68 aa3.5□□□□□ -1.85
YSF3YNL138W-A ATP1P07251 545 aaKnown RBP3.49□□□□□ -1.85
YSF3YNL138W-A ARD1P07347 238 aaPredicted RBP3.49□□□□□ -1.85
YSF3YNL138W-A SAN1P22470 610 aa3.49□□□□□ -1.85
YSF3YNL138W-A ADH7P25377 361 aa3.49□□□□□ -1.85
YSF3YNL138W-A RSA4P25382 515 aaKnown RBP3.49□□□□□ -1.85
YSF3YNL138W-A GID7P25569 745 aa3.49□□□□□ -1.85
YSF3YNL138W-A TFB1P32776 642 aa3.49□□□□□ -1.85
YSF3YNL138W-A UBP11P36026 717 aa3.49□□□□□ -1.85
YSF3YNL138W-A HMT1P38074 348 aa3.49□□□□□ -1.85
YSF3YNL138W-A YBL029WP38201 376 aa3.49□□□□□ -1.85
YSF3YNL138W-A UBA4P38820 440 aa3.49□□□□□ -1.85
YSF3YNL138W-A IAH1P41734 238 aa3.49□□□□□ -1.85
YSF3YNL138W-A MEP2P41948 499 aa3.49□□□□□ -1.85
YSF3YNL138W-A LAM5P43560 674 aa3.49□□□□□ -1.85
YSF3YNL138W-A PIB2P53191 635 aa3.49□□□□□ -1.85
YSF3YNL138W-A RSM23Q01163 450 aa3.49□□□□□ -1.85
YSF3YNL138W-A NGL3Q03210 505 aa3.49□□□□□ -1.85
YSF3YNL138W-A DPB4Q04603 196 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms