RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C INA17Q02888 182 aa3.06□□□□□ -1.92
SSN8YNL025C SPO19Q03029 223 aa3.06□□□□□ -1.92
SSN8YNL025C RSM28Q03430 361 aa3.06□□□□□ -1.92
SSN8YNL025C YMR130WQ04223 302 aa3.06□□□□□ -1.92
SSN8YNL025C ERV41Q04651 352 aa3.06□□□□□ -1.92
SSN8YNL025C ARG7Q04728 441 aa3.06□□□□□ -1.92
SSN8YNL025C MRI1Q06489 411 aaKnown RBP3.06□□□□□ -1.92
SSN8YNL025C GPN3Q06543 272 aa3.06□□□□□ -1.92
SSN8YNL025C ECM30Q06673 1274 aa3.06□□□□□ -1.92
SSN8YNL025C COS7Q07788 383 aa3.06□□□□□ -1.92
SSN8YNL025C DIA2Q08496 732 aaPredicted RBP3.06□□□□□ -1.92
SSN8YNL025C SPE4Q12455 300 aa3.06□□□□□ -1.92
SSN8YNL025C YPR089WO13585 888 aa3.05□□□□□ -1.92
SSN8YNL025C TPK2P06245 380 aa3.05□□□□□ -1.92
SSN8YNL025C STE3P06783 470 aa3.05□□□□□ -1.92
SSN8YNL025C IME1P21190 360 aa3.05□□□□□ -1.92
SSN8YNL025C PEX1P24004 1043 aa3.05□□□□□ -1.92
SSN8YNL025C IDH2P28241 369 aaKnown RBP3.05□□□□□ -1.92
SSN8YNL025C RAD14P28519 371 aa3.05□□□□□ -1.92
SSN8YNL025C RME1P32338 300 aaKnown RBP3.05□□□□□ -1.92
SSN8YNL025C ATP11P32453 318 aa3.05□□□□□ -1.92
SSN8YNL025C PDB1P32473 366 aaKnown RBP3.05□□□□□ -1.92
SSN8YNL025C SRB5P32585 307 aa3.05□□□□□ -1.92
SSN8YNL025C TMT1P32643 299 aa3.05□□□□□ -1.92
SSN8YNL025C RPT5P33297 434 aaKnown RBP3.05□□□□□ -1.92
SSN8YNL025C WBP1P33767 430 aaKnown RBP3.05□□□□□ -1.92
SSN8YNL025C TCD2P36101 447 aaKnown RBP3.05□□□□□ -1.92
SSN8YNL025C YHR112CP38716 378 aa3.05□□□□□ -1.92
SSN8YNL025C MLH1P38920 769 aa3.05□□□□□ -1.92
SSN8YNL025C FTR1P40088 404 aa3.05□□□□□ -1.92
SSN8YNL025C SHQ1P40486 507 aaPredicted RBP3.05□□□□□ -1.92
SSN8YNL025C NMD5P46970 1048 aa3.05□□□□□ -1.92
SSN8YNL025C IRC8P47046 822 aa3.05□□□□□ -1.92
SSN8YNL025C MND1P53102 219 aa3.05□□□□□ -1.92
SSN8YNL025C PIB2P53191 635 aa3.05□□□□□ -1.92
SSN8YNL025C SRL4Q03085 281 aa3.05□□□□□ -1.92
SSN8YNL025C ACL4Q03771 387 aa3.05□□□□□ -1.92
SSN8YNL025C FRE3Q08905 711 aa3.05□□□□□ -1.92
SSN8YNL025C YOL107WQ12239 342 aa3.05□□□□□ -1.92
SSN8YNL025C SRN2Q99176 213 aa3.05□□□□□ -1.92
SSN8YNL025C YML133CQ03099 1374 aa3.04□□□□□ -1.92
SSN8YNL025C YLL067CQ07888 1374 aa3.04□□□□□ -1.92
SSN8YNL025C YLL066CQ99208 1374 aa3.04□□□□□ -1.92
SSN8YNL025C ARG4P04076 463 aaPredicted RBP3.04□□□□□ -1.92
SSN8YNL025C CDC36P06100 191 aaPredicted RBP3.04□□□□□ -1.92
SSN8YNL025C PEP5P12868 1029 aa3.04□□□□□ -1.92
SSN8YNL025C SNT1P25357 1226 aa3.04□□□□□ -1.92
SSN8YNL025C ADH7P25377 361 aa3.04□□□□□ -1.92
SSN8YNL025C BUD14P27637 709 aa3.04□□□□□ -1.92
SSN8YNL025C PRO3P32263 286 aaKnown RBP3.04□□□□□ -1.92
SSN8YNL025C HXT3P32466 567 aaKnown RBP3.04□□□□□ -1.92
SSN8YNL025C MTC7P32633 139 aa3.04□□□□□ -1.92
SSN8YNL025C VPS51P36116 164 aa3.04□□□□□ -1.92
SSN8YNL025C SUR2P38992 349 aa3.04□□□□□ -1.92
SSN8YNL025C CCT6P39079 546 aa3.04□□□□□ -1.92
SSN8YNL025C SCC4P40090 624 aa3.04□□□□□ -1.92
SSN8YNL025C SGN1P40561 250 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
SSN8YNL025C CIN1P40987 1014 aa3.04□□□□□ -1.92
SSN8YNL025C CTK2P46962 323 aa3.04□□□□□ -1.92
SSN8YNL025C BIT61P47041 543 aa3.04□□□□□ -1.92
SSN8YNL025C DRN1P53255 507 aaKnown RBP3.04□□□□□ -1.92
SSN8YNL025C YGR127WP53275 312 aa3.04□□□□□ -1.92
SSN8YNL025C HEF3P53978 1044 aaKnown RBP3.04□□□□□ -1.92
SSN8YNL025C RSN1Q03516 953 aa3.04□□□□□ -1.92
SSN8YNL025C WAR1Q03631 944 aa3.04□□□□□ -1.92
SSN8YNL025C HMO1Q03973 246 aaKnown RBP3.04□□□□□ -1.92
SSN8YNL025C BNA7Q04066 261 aa3.04□□□□□ -1.92
SSN8YNL025C PDS5Q04264 1277 aa3.04□□□□□ -1.92
SSN8YNL025C YPR078CQ06813 372 aa3.04□□□□□ -1.92
SSN8YNL025C YAP7Q08182 245 aa3.04□□□□□ -1.92
SSN8YNL025C DCP1Q12517 231 aaPredicted RBP3.04□□□□□ -1.92
SSN8YNL025C LAG2Q92325 660 aa3.04□□□□□ -1.92
SSN8YNL025C PNO1Q99216 274 aaKnown RBP3.04□□□□□ -1.92
SSN8YNL025C MF(ALPHA)1P01149 165 aa3.03□□□□□ -1.92
SSN8YNL025C ARD1P07347 238 aaPredicted RBP3.03□□□□□ -1.92
SSN8YNL025C YMR085WP0CF18 432 aa3.03□□□□□ -1.92
SSN8YNL025C GAL3P13045 520 aa3.03□□□□□ -1.92
SSN8YNL025C THR4P16120 514 aaKnown RBP3.03□□□□□ -1.92
SSN8YNL025C PMA2P19657 947 aa3.03□□□□□ -1.92
SSN8YNL025C URA4P20051 364 aa3.03□□□□□ -1.92
SSN8YNL025C VPS33P20795 691 aa3.03□□□□□ -1.92
SSN8YNL025C VPS34P22543 875 aa3.03□□□□□ -1.92
SSN8YNL025C LRE1P25579 583 aaKnown RBP3.03□□□□□ -1.92
SSN8YNL025C URK1P27515 501 aa3.03□□□□□ -1.92
SSN8YNL025C ICL1P28240 557 aaPredicted RBP3.03□□□□□ -1.92
SSN8YNL025C ACP1P32463 125 aa3.03□□□□□ -1.92
SSN8YNL025C TUL1P36096 758 aa3.03□□□□□ -1.92
SSN8YNL025C ZTA1P38230 334 aaKnown RBP3.03□□□□□ -1.92
SSN8YNL025C YHR045WP38775 560 aa3.03□□□□□ -1.92
SSN8YNL025C HRB1P38922 454 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SSN8YNL025C RCY1P39531 840 aa3.03□□□□□ -1.92
SSN8YNL025C YJL193WP39542 402 aa3.03□□□□□ -1.92
SSN8YNL025C OTU1P43558 301 aa3.03□□□□□ -1.92
SSN8YNL025C FAR3P46671 204 aa3.03□□□□□ -1.92
SSN8YNL025C STB2P46679 850 aa3.03□□□□□ -1.92
SSN8YNL025C LOH1P47055 219 aa3.03□□□□□ -1.92
SSN8YNL025C ECM27P47144 725 aa3.03□□□□□ -1.92
SSN8YNL025C ASN2P49090 572 aaKnown RBP3.03□□□□□ -1.92
SSN8YNL025C COX18P53239 316 aa3.03□□□□□ -1.92
SSN8YNL025C YNL134CP53912 376 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms