RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C MRPL50P53724 139 aa3.42□□□□□ -1.86
SHH3YMR118C YNR068CP53754 272 aa3.42□□□□□ -1.86
SHH3YMR118C SPR6Q01684 191 aa3.42□□□□□ -1.86
SHH3YMR118C ENA2Q01896 1091 aa3.42□□□□□ -1.86
SHH3YMR118C TOF2Q02208 771 aa3.42□□□□□ -1.86
SHH3YMR118C YML131WQ03102 365 aa3.42□□□□□ -1.86
SHH3YMR118C RLI1Q03195 608 aaKnown RBP3.42□□□□□ -1.86
SHH3YMR118C EAR1Q03212 550 aa3.42□□□□□ -1.86
SHH3YMR118C CWC21Q03375 135 aaKnown RBP3.42□□□□□ -1.86
SHH3YMR118C SKY1Q03656 742 aa3.42□□□□□ -1.86
SHH3YMR118C SNU56Q03782 492 aaKnown RBP3.42□□□□□ -1.86
SHH3YMR118C RAD33Q04231 177 aa3.42□□□□□ -1.86
SHH3YMR118C NEJ1Q06148 342 aa3.42□□□□□ -1.86
SHH3YMR118C PGC1Q08959 321 aa3.42□□□□□ -1.86
SHH3YMR118C ATG29Q12092 213 aa3.42□□□□□ -1.86
SHH3YMR118C BAG7Q12128 409 aa3.42□□□□□ -1.86
SHH3YMR118C TRM10Q12400 293 aa3.42□□□□□ -1.86
SHH3YMR118C ENA5Q12691 1091 aa3.42□□□□□ -1.86
SHH3YMR118C MHF1Q3E835 90 aa3.42□□□□□ -1.86
SHH3YMR118C COX4P04037 155 aa3.41□□□□□ -1.86
SHH3YMR118C HEM2P05373 342 aa3.41□□□□□ -1.86
SHH3YMR118C HIS3P06633 220 aa3.41□□□□□ -1.86
SHH3YMR118C RAD7P06779 565 aa3.41□□□□□ -1.86
SHH3YMR118C CBP1P07252 654 aa3.41□□□□□ -1.86
SHH3YMR118C FBP1P09201 348 aa3.41□□□□□ -1.86
SHH3YMR118C MIS1P09440 975 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C COS2P0CX12 379 aa3.41□□□□□ -1.86
SHH3YMR118C COS3P0CX13 379 aa3.41□□□□□ -1.86
SHH3YMR118C CAP2P13517 287 aa3.41□□□□□ -1.86
SHH3YMR118C RPL24BP24000 155 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C GIT1P25346 518 aa3.41□□□□□ -1.86
SHH3YMR118C SGF29P25554 259 aa3.41□□□□□ -1.86
SHH3YMR118C LRE1P25579 583 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C CIN8P27895 1000 aa3.41□□□□□ -1.86
SHH3YMR118C FUN30P31380 1131 aa3.41□□□□□ -1.86
SHH3YMR118C PRO1P32264 428 aa3.41□□□□□ -1.86
SHH3YMR118C ARP2P32381 391 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C CDC5P32562 705 aa3.41□□□□□ -1.86
SHH3YMR118C COX13P32799 129 aa3.41□□□□□ -1.86
SHH3YMR118C YKL063CP35725 167 aa3.41□□□□□ -1.86
SHH3YMR118C FRE2P36033 711 aa3.41□□□□□ -1.86
SHH3YMR118C MRPL7P36519 292 aa3.41□□□□□ -1.86
SHH3YMR118C MRPL17P36528 281 aa3.41□□□□□ -1.86
SHH3YMR118C GPX2P38143 162 aa3.41□□□□□ -1.86
SHH3YMR118C MRP21P38175 177 aa3.41□□□□□ -1.86
SHH3YMR118C FMP23P38231 175 aa3.41□□□□□ -1.86
SHH3YMR118C ARN2P38724 620 aa3.41□□□□□ -1.86
SHH3YMR118C IPI1P38803 334 aaPredicted RBP3.41□□□□□ -1.86
SHH3YMR118C YHR131CP38835 850 aa3.41□□□□□ -1.86
SHH3YMR118C MTG2P38860 518 aa3.41□□□□□ -1.86
SHH3YMR118C VMA7P39111 118 aa3.41□□□□□ -1.86
SHH3YMR118C FHL1P39521 936 aa3.41□□□□□ -1.86
SHH3YMR118C SOP4P39543 234 aaPredicted RBP3.41□□□□□ -1.86
SHH3YMR118C YAR028WP39548 234 aa3.41□□□□□ -1.86
SHH3YMR118C YEL020CP39994 560 aa3.41□□□□□ -1.86
SHH3YMR118C TPA1P40032 644 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C DDI1P40087 428 aa3.41□□□□□ -1.86
SHH3YMR118C PEA2P40091 420 aa3.41□□□□□ -1.86
SHH3YMR118C UTP18P40362 594 aaPredicted RBP3.41□□□□□ -1.86
SHH3YMR118C ATM1P40416 690 aa3.41□□□□□ -1.86
SHH3YMR118C PFD1P46988 109 aa3.41□□□□□ -1.86
SHH3YMR118C RRT6P53117 311 aaPredicted RBP3.41□□□□□ -1.86
SHH3YMR118C EFM5P53200 248 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C IMP4P53941 290 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C ALG11P53954 548 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C SMA1Q02651 245 aa3.41□□□□□ -1.86
SHH3YMR118C MUK1Q02866 612 aa3.41□□□□□ -1.86
SHH3YMR118C RGC1Q06108 1083 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C CRN1Q06440 651 aa3.41□□□□□ -1.86
SHH3YMR118C AAD4Q07747 329 aa3.41□□□□□ -1.86
SHH3YMR118C DNL4Q08387 944 aaPredicted RBP3.41□□□□□ -1.86
SHH3YMR118C UAF30Q08747 228 aa3.41□□□□□ -1.86
SHH3YMR118C MSC6Q08818 692 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C SAM4Q08985 325 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C SLF1Q12034 447 aaKnown RBP3.41□□□□□ -1.86
SHH3YMR118C SMF3Q12078 473 aaPredicted RBP3.41□□□□□ -1.86
SHH3YMR118C YLR049CQ12110 428 aa3.41□□□□□ -1.86
SHH3YMR118C UBX3Q12229 455 aa3.41□□□□□ -1.86
SHH3YMR118C ERP3Q12403 225 aa3.41□□□□□ -1.86
SHH3YMR118C YPL247CQ12523 523 aa3.41□□□□□ -1.86
SHH3YMR118C FRT1Q99332 602 aa3.41□□□□□ -1.86
SHH3YMR118C RPS9AO13516 197 aaKnown RBP3.4□□□□□ -1.87
SHH3YMR118C TIM9O74700 87 aa3.4□□□□□ -1.87
SHH3YMR118C ARG81P05085 880 aa3.4□□□□□ -1.87
SHH3YMR118C RPS9BP05755 195 aaKnown RBP3.4□□□□□ -1.87
SHH3YMR118C CTT1P06115 562 aa3.4□□□□□ -1.87
SHH3YMR118C ATP1P07251 545 aaKnown RBP3.4□□□□□ -1.87
SHH3YMR118C HMG1P12683 1054 aa3.4□□□□□ -1.87
SHH3YMR118C GLN4P13188 809 aaKnown RBP3.4□□□□□ -1.87
SHH3YMR118C APE1P14904 514 aa3.4□□□□□ -1.87
SHH3YMR118C YAP1P19880 650 aaKnown RBP3.4□□□□□ -1.87
SHH3YMR118C AAT2P23542 418 aaKnown RBP3.4□□□□□ -1.87
SHH3YMR118C PHO3P24031 467 aa3.4□□□□□ -1.87
SHH3YMR118C CHA1P25379 360 aaKnown RBP3.4□□□□□ -1.87
SHH3YMR118C EMC1P25574 760 aa3.4□□□□□ -1.87
SHH3YMR118C YCL049CP25577 312 aa3.4□□□□□ -1.87
SHH3YMR118C BEM1P29366 551 aa3.4□□□□□ -1.87
SHH3YMR118C ASF2P32448 525 aaPredicted RBP3.4□□□□□ -1.87
SHH3YMR118C MRS6P32864 603 aaKnown RBP3.4□□□□□ -1.87
SHH3YMR118C MRPL6P32904 214 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms