RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W LSP1Q12230 341 aaKnown RBP4.35□□□□□ -1.71
SPO20YMR017W PGA3Q12746 312 aaKnown RBP4.35□□□□□ -1.71
SPO20YMR017W BRR1Q99177 341 aaPredicted RBP4.35□□□□□ -1.71
SPO20YMR017W YML002WP0CF17 737 aa4.34□□□□□ -1.71
SPO20YMR017W BUD14P27637 709 aa4.34□□□□□ -1.71
SPO20YMR017W NDC1P32500 655 aa4.34□□□□□ -1.71
SPO20YMR017W YGL260WP53056 76 aa4.34□□□□□ -1.71
SPO20YMR017W SYF1Q04048 859 aaPredicted RBP4.34□□□□□ -1.71
SPO20YMR017W RBS1Q05672 457 aaKnown RBP4.34□□□□□ -1.71
SPO20YMR017W MRPL51Q06090 140 aaPredicted RBP4.34□□□□□ -1.71
SPO20YMR017W SCM3Q12334 223 aa4.34□□□□□ -1.71
SPO20YMR017W MTF1P14908 341 aaKnown RBP4.33□□□□□ -1.72
SPO20YMR017W ATP11P32453 318 aa4.33□□□□□ -1.72
SPO20YMR017W FMP46P36141 133 aaKnown RBP4.33□□□□□ -1.72
SPO20YMR017W OCA1P50946 238 aaPredicted RBP4.33□□□□□ -1.72
SPO20YMR017W YGL108CP53139 140 aa4.33□□□□□ -1.72
SPO20YMR017W TAP42Q04372 366 aa4.33□□□□□ -1.72
SPO20YMR017W RPL15AP05748 204 aaKnown RBP4.32□□□□□ -1.72
SPO20YMR017W GLK1P17709 500 aaKnown RBP4.32□□□□□ -1.72
SPO20YMR017W EXO70P19658 623 aa4.32□□□□□ -1.72
SPO20YMR017W OTU2P38747 307 aaKnown RBP4.32□□□□□ -1.72
SPO20YMR017W DHH1P39517 506 aaKnown RBP4.32□□□□□ -1.72
SPO20YMR017W NOC2P39744 710 aaKnown RBP4.32□□□□□ -1.72
SPO20YMR017W RTT101P47050 842 aa4.32□□□□□ -1.72
SPO20YMR017W IRC15Q02733 499 aa4.32□□□□□ -1.72
SPO20YMR017W KEL3Q08979 651 aaPredicted RBP4.32□□□□□ -1.72
SPO20YMR017W YOL159C-AQ3E769 90 aa4.32□□□□□ -1.72
SPO20YMR017W SPB1P25582 841 aaPredicted RBP4.31□□□□□ -1.72
SPO20YMR017W NPL6P32832 435 aa4.31□□□□□ -1.72
SPO20YMR017W YMR147WP40218 223 aaKnown RBP4.31□□□□□ -1.72
SPO20YMR017W SYG1P40528 902 aa4.31□□□□□ -1.72
SPO20YMR017W POP1P41812 875 aa4.31□□□□□ -1.72
SPO20YMR017W RKM5Q12367 367 aa4.31□□□□□ -1.72
SPO20YMR017W RPL3P14126 387 aaKnown RBP4.3□□□□□ -1.72
SPO20YMR017W FUR1P18562 216 aaKnown RBP4.3□□□□□ -1.72
SPO20YMR017W RAD14P28519 371 aa4.3□□□□□ -1.72
SPO20YMR017W ATS1P31386 333 aa4.3□□□□□ -1.72
SPO20YMR017W PRO3P32263 286 aaKnown RBP4.3□□□□□ -1.72
SPO20YMR017W AFG1P32317 509 aa4.3□□□□□ -1.72
SPO20YMR017W SAS3P34218 831 aa4.3□□□□□ -1.72
SPO20YMR017W MDM31P38880 579 aa4.3□□□□□ -1.72
SPO20YMR017W GPD2P41911 440 aaKnown RBP4.3□□□□□ -1.72
SPO20YMR017W ERP1Q05359 219 aaKnown RBP4.3□□□□□ -1.72
SPO20YMR017W VPS74Q06385 345 aa4.3□□□□□ -1.72
SPO20YMR017W RRG1Q12167 365 aaPredicted RBP4.3□□□□□ -1.72
SPO20YMR017W SFI1Q12369 946 aa4.3□□□□□ -1.72
SPO20YMR017W SET6Q12529 373 aa4.3□□□□□ -1.72
SPO20YMR017W CLB3P24870 427 aa4.29□□□□□ -1.72
SPO20YMR017W YCR022CP25620 114 aa4.29□□□□□ -1.72
SPO20YMR017W SPC110P32380 944 aa4.29□□□□□ -1.72
SPO20YMR017W HXT3P32466 567 aaKnown RBP4.29□□□□□ -1.72
SPO20YMR017W NFU1P32860 256 aa4.29□□□□□ -1.72
SPO20YMR017W MFT1P33441 392 aaKnown RBP4.29□□□□□ -1.72
SPO20YMR017W MTC4P38335 694 aaKnown RBP4.29□□□□□ -1.72
SPO20YMR017W RPH1P39956 796 aa4.29□□□□□ -1.72
SPO20YMR017W SHO1P40073 367 aa4.29□□□□□ -1.72
SPO20YMR017W FAU1P40099 211 aa4.29□□□□□ -1.72
SPO20YMR017W RPR2P40571 144 aa4.29□□□□□ -1.72
SPO20YMR017W VMA13P41807 478 aaKnown RBP4.29□□□□□ -1.72
SPO20YMR017W ELP2P42935 788 aa4.29□□□□□ -1.72
SPO20YMR017W URB2P47108 1174 aa4.29□□□□□ -1.72
SPO20YMR017W YGR149WP48236 432 aa4.29□□□□□ -1.72
SPO20YMR017W RPA49Q01080 415 aaPredicted RBP4.29□□□□□ -1.72
SPO20YMR017W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
SPO20YMR017W YMR230W-AQ3E7B5 62 aa4.29□□□□□ -1.72
SPO20YMR017W RHO2P06781 192 aa4.28□□□□□ -1.72
SPO20YMR017W RPL20AP0CX23 172 aaKnown RBP4.28□□□□□ -1.72
SPO20YMR017W RPL20BP0CX24 172 aaPredicted RBP4.28□□□□□ -1.72
SPO20YMR017W PPH22P23595 377 aa4.28□□□□□ -1.72
SPO20YMR017W BUB3P26449 341 aa4.28□□□□□ -1.72
SPO20YMR017W LOS1P33418 1100 aaPredicted RBP4.28□□□□□ -1.72
SPO20YMR017W CBP4P37267 147 aa4.28□□□□□ -1.72
SPO20YMR017W YFR016CP43597 1233 aaKnown RBP4.28□□□□□ -1.72
SPO20YMR017W GWT1P47026 490 aa4.28□□□□□ -1.72
SPO20YMR017W MNP1P53163 194 aaPredicted RBP4.28□□□□□ -1.72
SPO20YMR017W YMR155WQ03795 547 aa4.28□□□□□ -1.72
SPO20YMR017W SPC19Q03954 165 aa4.28□□□□□ -1.72
SPO20YMR017W VTA1Q06263 330 aa4.28□□□□□ -1.72
SPO20YMR017W PPT2Q12036 173 aa4.28□□□□□ -1.72
SPO20YMR017W AYT1Q12226 474 aa4.28□□□□□ -1.72
SPO20YMR017W RRD2Q12461 358 aa4.28□□□□□ -1.72
SPO20YMR017W CYB2P00175 591 aa4.27□□□□□ -1.73
SPO20YMR017W SPS4P09937 338 aa4.27□□□□□ -1.73
SPO20YMR017W ATP10P18496 279 aa4.27□□□□□ -1.73
SPO20YMR017W FUN19P28003 413 aaPredicted RBP4.27□□□□□ -1.73
SPO20YMR017W IDH2P28241 369 aaKnown RBP4.27□□□□□ -1.73
SPO20YMR017W HAT2P39984 401 aa4.27□□□□□ -1.73
SPO20YMR017W ALG8P40351 577 aa4.27□□□□□ -1.73
SPO20YMR017W DLD2P46681 530 aaKnown RBP4.27□□□□□ -1.73
SPO20YMR017W KTR5P53966 522 aaPredicted RBP4.27□□□□□ -1.73
SPO20YMR017W YBR298C-AQ8TGK4 73 aa4.27□□□□□ -1.73
SPO20YMR017W LEU4P06208 619 aaKnown RBP4.26□□□□□ -1.73
SPO20YMR017W PHO2P07269 559 aa4.26□□□□□ -1.73
SPO20YMR017W YIM1P28625 365 aa4.26□□□□□ -1.73
SPO20YMR017W PMU1P36069 295 aa4.26□□□□□ -1.73
SPO20YMR017W TUL1P36096 758 aa4.26□□□□□ -1.73
SPO20YMR017W BYE1P36106 594 aa4.26□□□□□ -1.73
SPO20YMR017W THI2P38141 450 aa4.26□□□□□ -1.73
SPO20YMR017W LSM5P40089 93 aaKnown RBP4.26□□□□□ -1.73
SPO20YMR017W YJL213WP40896 331 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms