RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	MRX1	P40050	688 aa		1.29	□□□□□ -2.2
CLU1	YMR012W	YGL138C	P53122	345 aa		1.29	□□□□□ -2.2
CLU1	YMR012W	YGR126W	P53274	230 aa		1.29	□□□□□ -2.2
CLU1	YMR012W	COQ6	P53318	479 aa		1.29	□□□□□ -2.2
CLU1	YMR012W	YNL050C	P53952	270 aa		1.29	□□□□□ -2.2
CLU1	YMR012W	NUP116	Q02630	1113 aa		1.29	□□□□□ -2.2
CLU1	YMR012W	FAR10	Q06001	478 aa		1.29	□□□□□ -2.2
CLU1	YMR012W	MRI1	Q06489	411 aa	Known RBP	1.29	□□□□□ -2.2
CLU1	YMR012W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	1.29	□□□□□ -2.2	not detected
CLU1	YMR012W	YRA1	Q12159	226 aa	Known RBP	1.29	□□□□□ -2.2
CLU1	YMR012W	VCX1	Q99385	411 aa		1.29	□□□□□ -2.2
CLU1	YMR012W	SOD2	P00447	233 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	RPS24A	P0CX31	135 aa	Known RBP	1.28	□□□□□ -2.2
CLU1	YMR012W	RPS24B	P0CX32	135 aa	Known RBP	1.28	□□□□□ -2.2
CLU1	YMR012W	DAL82	P21705	255 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	OCA4	P25366	362 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	CIN8	P27895	1000 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	URA7	P28274	579 aa	Known RBP	1.28	□□□□□ -2.2
CLU1	YMR012W	TIF3	P34167	436 aa	Known RBP	1.28	□□□□□ -2.2
CLU1	YMR012W	NNK1	P36003	928 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	UTH1	P36135	365 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	HMT1	P38074	348 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	YHR218W	P38899	603 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	FET3	P38993	636 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	BAP3	P41815	604 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	PMT6	P42934	759 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	CAK1	P43568	368 aa	Predicted RBP	1.28	□□□□□ -2.2
CLU1	YMR012W	YJL043W	P47053	257 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	AVT1	P47082	602 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	DIA3	P52290	468 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	CIK1	Q01649	594 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	MLH3	Q12083	715 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	ERP3	Q12403	225 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	ISN1	Q99312	450 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	AI3	P03877	415 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	PGM1	P33401	570 aa	Known RBP	1.28	□□□□□ -2.2
CLU1	YMR012W	APT2	P36973	181 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	YHL017W	P38745	532 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	PCL5	P38794	229 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	PLB1	P39105	664 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	SLZ1	P40167	298 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	YIR016W	P40572	265 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	TEL2	P53038	688 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	YIP4	P53093	235 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	ARI1	P53111	347 aa	Known RBP	1.28	□□□□□ -2.2
CLU1	YMR012W	IMO32	P53219	342 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	YNL092W	P53934	400 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	PDR8	Q06149	701 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	TPO3	Q06451	622 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	OPY2	Q06810	360 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	THI21	Q08975	551 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	CHS5	Q12114	671 aa	Known RBP	1.28	□□□□□ -2.2
CLU1	YMR012W	UBX3	Q12229	455 aa		1.28	□□□□□ -2.2
CLU1	YMR012W	TRP3	P00937	484 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	AAC1	P04710	309 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	RAD7	P06779	565 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	GAC1	P28006	793 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	GSH1	P32477	678 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	ECM25	P32525	599 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	IMP3	P32899	183 aa	Predicted RBP	1.28	□□□□□ -2.21
CLU1	YMR012W	COY1	P34237	679 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	THI80	P35202	319 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	MAL32	P38158	584 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	MIP6	P38760	659 aa	Known RBP	1.28	□□□□□ -2.21
CLU1	YMR012W	YGR210C	P42942	411 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	BNA6	P43619	295 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	NPA3	P47122	385 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	EMC2	P47133	292 aa	Known RBP	1.28	□□□□□ -2.21
CLU1	YMR012W	YGR149W	P48236	432 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	PHO23	P50947	330 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	MRPL22	P53881	309 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	PNG1	Q02890	363 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	GIS1	Q03833	894 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	YDL086W	Q07505	273 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	YPL216W	Q08964	1102 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	APL4	Q12028	832 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	HER1	Q12276	1246 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	ZPS1	Q12512	249 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	RAD61	Q99359	647 aa		1.28	□□□□□ -2.21
CLU1	YMR012W	SEN1	Q00416	2231 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	COR1	P07256	457 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	SSA3	P09435	649 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	ERG11	P10614	530 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	MSS116	P15424	664 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	SRP54	P20424	541 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	TKL1	P23254	680 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	YCR006C	P25350	157 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	MSS51	P32335	436 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	CBF2	P32504	956 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	MTC7	P32633	139 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	CUE2	P36075	443 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	YKL071W	P36086	256 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	KAE1	P36132	386 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	REV7	P38927	245 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	YDR089W	P38966	869 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	YJL193W	P39542	402 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	YGR054W	P53235	642 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	EOS1	P53938	366 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	YLR297W	Q05899	129 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	PFA4	Q12006	378 aa		1.27	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 33 ms