RNA–Protein interactions for RNA: YLR307W

CDA1, Transcript of Chitin deacetylase, yeast

Gene CDA1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA1	YLR307W	MHF2	Q3E829	80 aa		7.37	□□□□□ -1.23
CDA1	YLR307W	YCL012C	Q8J0M4	134 aa		7.37	□□□□□ -1.23
CDA1	YLR307W	YOR338W	Q99326	363 aa		7.37	□□□□□ -1.23
CDA1	YLR307W	PHO5	P00635	467 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	ATP4	P05626	244 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	PRT1	P06103	763 aa	Known RBP	7.36	□□□□□ -1.23
CDA1	YLR307W	YAR066W	P0CX18	203 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	YHR214W	P0CX19	203 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	NTG1	P31378	399 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	SPS19	P32573	292 aa	Known RBP	7.36	□□□□□ -1.23
CDA1	YLR307W	RMA1	P36001	430 aa	Known RBP	7.36	□□□□□ -1.23
CDA1	YLR307W	YPT52	P36018	234 aa	Known RBP	7.36	□□□□□ -1.23
CDA1	YLR307W	BMT2	P38278	337 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	HSE1	P38753	452 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	PCL5	P38794	229 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	SSN3	P39073	555 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	REF2	P42073	533 aa	Predicted RBP	7.36	□□□□□ -1.23
CDA1	YLR307W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	not detected
CDA1	YLR307W	YMR099C	Q03161	297 aa	Known RBP	7.36	□□□□□ -1.23
CDA1	YLR307W	PPN1	Q04119	674 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	SEG1	Q04279	960 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	YDR056C	Q12025	205 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	MLH3	Q12083	715 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	SNF8	Q12483	233 aa		7.36	□□□□□ -1.23
CDA1	YLR307W	TY4B-P	A0A0B7P3V8	1104 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	APA1	P16550	321 aa	Known RBP	7.35	□□□□□ -1.23
CDA1	YLR307W	DAP2	P18962	818 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.35	□□□□□ -1.23	not detected
CDA1	YLR307W	ATO2	P32907	282 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	UTP11	P34247	250 aa	Predicted RBP	7.35	□□□□□ -1.23
CDA1	YLR307W	GLG1	P36143	616 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	FES1	P38260	290 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	YHR020W	P38708	688 aa	Known RBP	7.35	□□□□□ -1.23
CDA1	YLR307W	TIM17	P39515	158 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	ERV46	P39727	415 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	JHD1	P40034	492 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	AVT6	P40074	448 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	UTP18	P40362	594 aa	Predicted RBP	7.35	□□□□□ -1.23
CDA1	YLR307W	TOM22	P49334	152 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	YGR054W	P53235	642 aa	Known RBP	7.35	□□□□□ -1.23
CDA1	YLR307W	ESF2	P53743	316 aa	Known RBP	7.35	□□□□□ -1.23
CDA1	YLR307W	YNL260C	P53846	198 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	SED5	Q01590	340 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	MET31	Q03081	177 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	HEH2	Q03281	663 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	RSN1	Q03516	953 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	FMP42	Q04991	504 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	MCM21	Q06675	368 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	MFG1	Q07684	458 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	7.35	□□□□□ -1.23	not detected
CDA1	YLR307W	GYP1	Q08484	637 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	PUS7	Q08647	676 aa	Known RBP	7.35	□□□□□ -1.23
CDA1	YLR307W	RPN5	Q12250	445 aa	Known RBP	7.35	□□□□□ -1.23
CDA1	YLR307W	RRP42	Q12277	265 aa	Predicted RBP	7.35	□□□□□ -1.23
CDA1	YLR307W	PST1	Q12355	444 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	MDM12	Q92328	271 aa		7.35	□□□□□ -1.23
CDA1	YLR307W	TPK3	P05986	398 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	GPH1	P06738	902 aa	Known RBP	7.34	□□□□□ -1.23
CDA1	YLR307W	KAR1	P11927	433 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	HMG2	P12684	1045 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	MET8	P15807	274 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	PRI2	P20457	528 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	PEX34	P25584	144 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	PUP2	P32379	260 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	SEC66	P33754	206 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	NTR2	P36118	322 aa	Predicted RBP	7.34	□□□□□ -1.23
CDA1	YLR307W	RIB1	P38066	345 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	DBP8	P38719	431 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	LRP1	P38801	184 aa	Known RBP	7.34	□□□□□ -1.23
CDA1	YLR307W	EGD2	P38879	174 aa	Known RBP	7.34	□□□□□ -1.23
CDA1	YLR307W	RSP5	P39940	809 aa	Known RBP	7.34	□□□□□ -1.23
CDA1	YLR307W	HEM14	P40012	539 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	IRC5	P43610	853 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	RBL2	P48606	106 aa	Known RBP	7.34	□□□□□ -1.23
CDA1	YLR307W	MON1	P53129	644 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	SFB2	P53953	876 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	MPS1	P54199	764 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	SDH1	Q00711	640 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	SWP1	Q02795	286 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	TFB3	Q03290	321 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	CLU1	Q03690	1277 aa	Known RBP	7.34	□□□□□ -1.23
CDA1	YLR307W	SPO71	Q03868	1245 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	EMI1	Q04406	187 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	HER1	Q12276	1246 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	WTM1	Q12363	437 aa	Known RBP	7.34	□□□□□ -1.23
CDA1	YLR307W	SRN2	Q99176	213 aa		7.34	□□□□□ -1.23
CDA1	YLR307W	TIM9	O74700	87 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	AI3	P03877	415 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	STE3	P06783	470 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	CBS2	P14905	389 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	SGV1	P23293	657 aa	Known RBP	7.33	□□□□□ -1.24
CDA1	YLR307W	VMA6	P32366	345 aa	Known RBP	7.33	□□□□□ -1.24
CDA1	YLR307W	PXA2	P34230	853 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	ECM8	P38246	354 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	SPF1	P39986	1215 aa	Known RBP	7.33	□□□□□ -1.24
CDA1	YLR307W	FMP10	P40098	244 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	AIM20	P40451	204 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	FAR7	P43592	221 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	GLG2	P47011	380 aa		7.33	□□□□□ -1.24
CDA1	YLR307W	EMC4	P53073	190 aa		7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms