RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C FAB1P34756 2278 aa2.49□□□□□ -2.01
CMS1YLR003C CAR1P00812 333 aaKnown RBP2.49□□□□□ -2.01
CMS1YLR003C DFR1P07807 211 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
CMS1YLR003C APE1P14904 514 aa2.49□□□□□ -2.01
CMS1YLR003C GPI10P30777 616 aa2.49□□□□□ -2.01
CMS1YLR003C SPR1P32603 445 aa2.49□□□□□ -2.01
CMS1YLR003C BNA4P38169 460 aa2.49□□□□□ -2.01
CMS1YLR003C NPR2P39923 615 aa2.49□□□□□ -2.01
CMS1YLR003C BTN2P53286 410 aa2.49□□□□□ -2.01
CMS1YLR003C MRPL19P53875 158 aa2.49□□□□□ -2.01
CMS1YLR003C SAM50P53969 484 aa2.49□□□□□ -2.01
CMS1YLR003C RHO4Q00246 291 aa2.49□□□□□ -2.01
CMS1YLR003C MDM1Q01846 1127 aa2.49□□□□□ -2.01
CMS1YLR003C TOF2Q02208 771 aa2.49□□□□□ -2.01
CMS1YLR003C IVY1Q04934 453 aa2.49□□□□□ -2.01
CMS1YLR003C THI20Q08224 551 aa2.49□□□□□ -2.01
CMS1YLR003C RIM20Q12033 661 aa2.49□□□□□ -2.01
CMS1YLR003C YCL021W-AQ96VH3 125 aa2.49□□□□□ -2.01
CMS1YLR003C MET17P06106 444 aa2.48□□□□□ -2.01
CMS1YLR003C RAD52P06778 471 aaKnown RBP2.48□□□□□ -2.01
CMS1YLR003C COR1P07256 457 aa2.48□□□□□ -2.01
CMS1YLR003C RPL20AP0CX23 172 aaKnown RBP2.48□□□□□ -2.01
CMS1YLR003C RPL20BP0CX24 172 aaPredicted RBP2.48□□□□□ -2.01
CMS1YLR003C SHP1P34223 423 aa2.48□□□□□ -2.01
CMS1YLR003C YEL057CP39983 233 aa2.48□□□□□ -2.01
CMS1YLR003C ALK1P43633 760 aaKnown RBP2.48□□□□□ -2.01
CMS1YLR003C ZPR1P53303 486 aaKnown RBP2.48□□□□□ -2.01
CMS1YLR003C WSC2P53832 503 aa2.48□□□□□ -2.01
CMS1YLR003C RLI1Q03195 608 aaKnown RBP2.48□□□□□ -2.01
CMS1YLR003C PDS5Q04264 1277 aa2.48□□□□□ -2.01
CMS1YLR003C MES1P00958 751 aaKnown RBP2.47□□□□□ -2.01
CMS1YLR003C PEP4P07267 405 aaKnown RBP2.47□□□□□ -2.01
CMS1YLR003C RED1P14291 827 aa2.47□□□□□ -2.01
CMS1YLR003C YCR022CP25620 114 aa2.47□□□□□ -2.01
CMS1YLR003C FRE1P32791 686 aa2.47□□□□□ -2.01
CMS1YLR003C WBP1P33767 430 aaKnown RBP2.47□□□□□ -2.01
CMS1YLR003C JNM1P36224 373 aa2.47□□□□□ -2.01
CMS1YLR003C OSH3P38713 996 aaKnown RBP2.47□□□□□ -2.01
CMS1YLR003C YHR210CP38893 341 aa2.47□□□□□ -2.01
CMS1YLR003C ESL1P40456 1118 aa2.47□□□□□ -2.01
CMS1YLR003C POP1P41812 875 aa2.47□□□□□ -2.01
CMS1YLR003C AIM22P47051 409 aa2.47□□□□□ -2.01
CMS1YLR003C ALT2P52892 507 aa2.47□□□□□ -2.01
CMS1YLR003C YLR152CP54072 576 aa2.47□□□□□ -2.01
CMS1YLR003C IMH1Q06704 911 aaKnown RBP2.47□□□□□ -2.01
CMS1YLR003C ATG29Q12092 213 aa2.47□□□□□ -2.01
CMS1YLR003C PMR1P13586 950 aa2.46□□□□□ -2.02
CMS1YLR003C RPL3P14126 387 aaKnown RBP2.46□□□□□ -2.02
CMS1YLR003C HSC82P15108 705 aaKnown RBP2.46□□□□□ -2.02
CMS1YLR003C TIF4631P39935 952 aaKnown RBP2.46□□□□□ -2.02
CMS1YLR003C SCD6P45978 349 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
CMS1YLR003C YJR154WP47181 346 aa2.46□□□□□ -2.02
CMS1YLR003C FIN1Q03898 291 aa2.46□□□□□ -2.02
CMS1YLR003C PHO92Q06390 306 aa2.46□□□□□ -2.02
CMS1YLR003C CKA1P15790 372 aa2.45□□□□□ -2.02
CMS1YLR003C FUR1P18562 216 aaKnown RBP2.45□□□□□ -2.02
CMS1YLR003C ELO2P25358 347 aa2.45□□□□□ -2.02
CMS1YLR003C IDH2P28241 369 aaKnown RBP2.45□□□□□ -2.02
CMS1YLR003C PMT1P33775 817 aa2.45□□□□□ -2.02
CMS1YLR003C CBP4P37267 147 aa2.45□□□□□ -2.02
CMS1YLR003C TCM62P38228 572 aaKnown RBP2.45□□□□□ -2.02
CMS1YLR003C RFS1P38234 210 aaKnown RBP2.45□□□□□ -2.02
CMS1YLR003C VID24P38263 362 aa2.45□□□□□ -2.02
CMS1YLR003C MBB1P39534 108 aa2.45□□□□□ -2.02
CMS1YLR003C ELP2P42935 788 aa2.45□□□□□ -2.02
CMS1YLR003C OCA1P50946 238 aaPredicted RBP2.45□□□□□ -2.02
CMS1YLR003C TWF1P53250 332 aa2.45□□□□□ -2.02
CMS1YLR003C GPI1P53306 609 aa2.45□□□□□ -2.02
CMS1YLR003C HEF3P53978 1044 aaKnown RBP2.45□□□□□ -2.02
CMS1YLR003C SLD5Q03406 294 aa2.45□□□□□ -2.02
CMS1YLR003C MRD1Q06106 887 aaKnown RBP2.45□□□□□ -2.02
CMS1YLR003C YOR365CQ08844 703 aa2.45□□□□□ -2.02
CMS1YLR003C NCE102Q12207 173 aaRIP-Chip data2.45□□□□□ -2.02not detected
CMS1YLR003C YDL007C-AQ2V2Q0 85 aa2.45□□□□□ -2.02
CMS1YLR003C RPL31BP0C2H9 113 aaKnown RBP2.44□□□□□ -2.02
CMS1YLR003C PRD1P25375 712 aa2.44□□□□□ -2.02
CMS1YLR003C AFG1P32317 509 aa2.44□□□□□ -2.02
CMS1YLR003C CMC1P36064 111 aa2.44□□□□□ -2.02
CMS1YLR003C UTP9P38882 575 aaKnown RBP2.44□□□□□ -2.02
CMS1YLR003C CSM2P40465 213 aa2.44□□□□□ -2.02
CMS1YLR003C MET28P40573 187 aa2.44□□□□□ -2.02
CMS1YLR003C GPD2P41911 440 aaKnown RBP2.44□□□□□ -2.02
CMS1YLR003C HXT14P42833 540 aa2.44□□□□□ -2.02
CMS1YLR003C IRC6P43615 237 aa2.44□□□□□ -2.02
CMS1YLR003C MNP1P53163 194 aaPredicted RBP2.44□□□□□ -2.02
CMS1YLR003C DRN1P53255 507 aaKnown RBP2.44□□□□□ -2.02
CMS1YLR003C RNY1Q02933 434 aaKnown RBP2.44□□□□□ -2.02
CMS1YLR003C SYF1Q04048 859 aaPredicted RBP2.44□□□□□ -2.02
CMS1YLR003C MRPL51Q06090 140 aaPredicted RBP2.44□□□□□ -2.02
CMS1YLR003C LSP1Q12230 341 aaKnown RBP2.44□□□□□ -2.02
CMS1YLR003C RTN2Q12443 393 aa2.44□□□□□ -2.02
CMS1YLR003C SEC39Q12745 709 aa2.44□□□□□ -2.02
CMS1YLR003C RRP12Q12754 1228 aaKnown RBP2.44□□□□□ -2.02
CMS1YLR003C CDC31P06704 161 aaKnown RBP2.43□□□□□ -2.02
CMS1YLR003C EXO70P19658 623 aa2.43□□□□□ -2.02
CMS1YLR003C PPH22P23595 377 aa2.43□□□□□ -2.02
CMS1YLR003C ROX1P25042 368 aa2.43□□□□□ -2.02
CMS1YLR003C MRE11P32829 692 aa2.43□□□□□ -2.02
CMS1YLR003C RSM22P36056 628 aa2.43□□□□□ -2.02
CMS1YLR003C PMU1P36069 295 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms