RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C CBS1P14066 229 aa3.95□□□□□ -1.78
RPF2YKR081C MFT1P33441 392 aaKnown RBP3.95□□□□□ -1.78
RPF2YKR081C SWH1P35845 1188 aa3.95□□□□□ -1.78
RPF2YKR081C TMA108P40462 946 aa3.95□□□□□ -1.78
RPF2YKR081C SGN1P40561 250 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
RPF2YKR081C GAL80P04387 435 aa3.94□□□□□ -1.78
RPF2YKR081C DFR1P07807 211 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
RPF2YKR081C PEP3P27801 918 aa3.94□□□□□ -1.78
RPF2YKR081C FUN19P28003 413 aaPredicted RBP3.94□□□□□ -1.78
RPF2YKR081C WBP1P33767 430 aaKnown RBP3.94□□□□□ -1.78
RPF2YKR081C ERP2P39704 215 aa3.94□□□□□ -1.78
RPF2YKR081C RAV1P47104 1357 aa3.93□□□□□ -1.78
RPF2YKR081C MES1P00958 751 aaKnown RBP3.93□□□□□ -1.78
RPF2YKR081C CPR1P14832 162 aaKnown RBP3.93□□□□□ -1.78
RPF2YKR081C MBB1P39534 108 aa3.93□□□□□ -1.78
RPF2YKR081C SHE10P53075 577 aa3.93□□□□□ -1.78
RPF2YKR081C VPS75P53853 264 aa3.93□□□□□ -1.78
RPF2YKR081C FAU1P40099 211 aa3.92□□□□□ -1.78
RPF2YKR081C URB2P47108 1174 aa3.92□□□□□ -1.78
RPF2YKR081C SVL3Q03088 825 aaKnown RBP3.92□□□□□ -1.78
RPF2YKR081C YER078W-AQ3E7A2 54 aa3.92□□□□□ -1.78
RPF2YKR081C GCN4P03069 281 aa3.91□□□□□ -1.78
RPF2YKR081C GFD2P25370 566 aaKnown RBP3.91□□□□□ -1.78
RPF2YKR081C BUB3P26449 341 aa3.91□□□□□ -1.78
RPF2YKR081C ATP11P32453 318 aa3.91□□□□□ -1.78
RPF2YKR081C MRE11P32829 692 aa3.91□□□□□ -1.78
RPF2YKR081C MRP4P32902 394 aa3.91□□□□□ -1.78
RPF2YKR081C RSM22P36056 628 aa3.91□□□□□ -1.78
RPF2YKR081C DED81P38707 554 aaKnown RBP3.91□□□□□ -1.78
RPF2YKR081C CAF130P53280 1122 aaPredicted RBP3.91□□□□□ -1.78
RPF2YKR081C CAF40P53829 373 aa3.91□□□□□ -1.78
RPF2YKR081C PIR3Q03180 325 aa3.91□□□□□ -1.78
RPF2YKR081C HEL2Q05580 639 aaKnown RBP3.91□□□□□ -1.78
RPF2YKR081C RKM5Q12367 367 aa3.91□□□□□ -1.78
RPF2YKR081C HIP1P06775 603 aa3.9□□□□□ -1.79
RPF2YKR081C SPT15P13393 240 aaKnown RBP3.9□□□□□ -1.79
RPF2YKR081C FRE2P36033 711 aa3.9□□□□□ -1.79
RPF2YKR081C PET130P47065 347 aa3.9□□□□□ -1.79
RPF2YKR081C OGG1P53397 376 aaPredicted RBP3.9□□□□□ -1.79
RPF2YKR081C SLG1P54867 378 aa3.9□□□□□ -1.79
RPF2YKR081C SEC39Q12745 709 aa3.9□□□□□ -1.79
RPF2YKR081C RRP12Q12754 1228 aaKnown RBP3.9□□□□□ -1.79
RPF2YKR081C YDL007C-AQ2V2Q0 85 aa3.9□□□□□ -1.79
RPF2YKR081C FOB1O13329 566 aa3.89□□□□□ -1.79
RPF2YKR081C CRM1P30822 1084 aaKnown RBP3.89□□□□□ -1.79
RPF2YKR081C NDI1P32340 513 aa3.89□□□□□ -1.79
RPF2YKR081C SRO77P38163 1010 aa3.89□□□□□ -1.79
RPF2YKR081C MET28P40573 187 aa3.89□□□□□ -1.79
RPF2YKR081C POP1P41812 875 aa3.89□□□□□ -1.79
RPF2YKR081C RMD8P43620 662 aa3.89□□□□□ -1.79
RPF2YKR081C ARK1P53974 638 aa3.89□□□□□ -1.79
RPF2YKR081C RRN11Q04712 507 aa3.89□□□□□ -1.79
RPF2YKR081C MFB1Q04922 465 aa3.89□□□□□ -1.79
RPF2YKR081C RPL31BP0C2H9 113 aaKnown RBP3.88□□□□□ -1.79
RPF2YKR081C HEM15P16622 393 aa3.88□□□□□ -1.79
RPF2YKR081C OCA4P25366 362 aa3.88□□□□□ -1.79
RPF2YKR081C LDB16P25587 256 aa3.88□□□□□ -1.79
RPF2YKR081C SYG1P40528 902 aa3.88□□□□□ -1.79
RPF2YKR081C GCD10P41814 478 aa3.88□□□□□ -1.79
RPF2YKR081C BTN2P53286 410 aa3.88□□□□□ -1.79
RPF2YKR081C YOR387CQ08910 206 aa3.88□□□□□ -1.79
RPF2YKR081C DEG1P31115 442 aaKnown RBP3.87□□□□□ -1.79
RPF2YKR081C IMP2'P32351 346 aa3.87□□□□□ -1.79
RPF2YKR081C PAD1P33751 242 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
RPF2YKR081C YBL059WP34224 193 aa3.87□□□□□ -1.79
RPF2YKR081C MRPL4P36517 319 aa3.87□□□□□ -1.79
RPF2YKR081C CBP4P37267 147 aa3.87□□□□□ -1.79
RPF2YKR081C DOT5P40553 215 aa3.87□□□□□ -1.79
RPF2YKR081C YFL067WP43537 175 aa3.87□□□□□ -1.79
RPF2YKR081C AVT4P50944 713 aa3.87□□□□□ -1.79
RPF2YKR081C OCA1P50946 238 aaPredicted RBP3.87□□□□□ -1.79
RPF2YKR081C PDS5Q04264 1277 aa3.87□□□□□ -1.79
RPF2YKR081C HHF1P02309 103 aaKnown RBP3.86□□□□□ -1.79
RPF2YKR081C LEU4P06208 619 aaKnown RBP3.86□□□□□ -1.79
RPF2YKR081C GLC7P32598 312 aaKnown RBP3.86□□□□□ -1.79
RPF2YKR081C CST26P38226 397 aa3.86□□□□□ -1.79
RPF2YKR081C YBR225WP38321 900 aa3.86□□□□□ -1.79
RPF2YKR081C NDT80P38830 627 aa3.86□□□□□ -1.79
RPF2YKR081C RRT5P43607 289 aa3.86□□□□□ -1.79
RPF2YKR081C TWF1P53250 332 aa3.86□□□□□ -1.79
RPF2YKR081C ARE2P53629 642 aaKnown RBP3.86□□□□□ -1.79
RPF2YKR081C YDR239CQ03780 787 aa3.86□□□□□ -1.79
RPF2YKR081C IMH1Q06704 911 aaKnown RBP3.86□□□□□ -1.79
RPF2YKR081C ERV2Q12284 196 aa3.86□□□□□ -1.79
RPF2YKR081C NAM9P27929 486 aa3.85□□□□□ -1.79
RPF2YKR081C RFS1P38234 210 aaKnown RBP3.85□□□□□ -1.79
RPF2YKR081C KEL1P38853 1164 aaKnown RBP3.85□□□□□ -1.79
RPF2YKR081C YEL057CP39983 233 aa3.85□□□□□ -1.79
RPF2YKR081C ISC1P40015 477 aaKnown RBP3.85□□□□□ -1.79
RPF2YKR081C YIL067CP40514 678 aa3.85□□□□□ -1.79
RPF2YKR081C ART5P53244 586 aaKnown RBP3.85□□□□□ -1.79
RPF2YKR081C IBD2P53892 351 aa3.85□□□□□ -1.79
RPF2YKR081C RPT6Q01939 405 aaKnown RBP3.85□□□□□ -1.79
RPF2YKR081C SOV1Q04748 898 aa3.85□□□□□ -1.79
RPF2YKR081C PBA1Q05778 276 aa3.85□□□□□ -1.79
RPF2YKR081C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
RPF2YKR081C ESA1Q08649 445 aa3.85□□□□□ -1.79
RPF2YKR081C SUP35P05453 685 aaKnown RBP3.84□□□□□ -1.79
RPF2YKR081C CHS1P08004 1131 aa3.84□□□□□ -1.79
RPF2YKR081C MET8P15807 274 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms