RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W ATC1Q04005 294 aa2.28□□□□□ -2.05
NUP100YKL068W SEG1Q04279 960 aa2.28□□□□□ -2.05
NUP100YKL068W HPF1Q05164 967 aa2.28□□□□□ -2.05
NUP100YKL068W BOP2Q06150 570 aa2.28□□□□□ -2.05
NUP100YKL068W TLG2Q08144 397 aa2.28□□□□□ -2.05
NUP100YKL068W FRE3Q08905 711 aa2.28□□□□□ -2.05
NUP100YKL068W TAF3Q12297 353 aa2.28□□□□□ -2.05
NUP100YKL068W YOR012WQ12351 137 aa2.28□□□□□ -2.05
NUP100YKL068W NBL1Q3E7Y6 73 aa2.28□□□□□ -2.05
NUP100YKL068W YML003WP0CF16 290 aa2.27□□□□□ -2.05
NUP100YKL068W PRP4P20053 465 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W KGD1P20967 1014 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W GEX1P25596 615 aa2.27□□□□□ -2.05
NUP100YKL068W FMO1P38866 432 aa2.27□□□□□ -2.05
NUP100YKL068W CTF8P38877 133 aa2.27□□□□□ -2.05
NUP100YKL068W HRB1P38922 454 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
NUP100YKL068W BUR6P40096 142 aa2.27□□□□□ -2.05
NUP100YKL068W SDP1P40479 209 aa2.27□□□□□ -2.05
NUP100YKL068W MMM1P41800 426 aa2.27□□□□□ -2.05
NUP100YKL068W GCN20P43535 752 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W YHC3P47040 408 aa2.27□□□□□ -2.05
NUP100YKL068W ARI1P53111 347 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W TIM21P53220 239 aa2.27□□□□□ -2.05
NUP100YKL068W MNT4P53745 580 aa2.27□□□□□ -2.05
NUP100YKL068W REC102Q02721 264 aa2.27□□□□□ -2.05
NUP100YKL068W YLR173WQ06247 608 aa2.27□□□□□ -2.05
NUP100YKL068W GAS5Q08193 484 aa2.27□□□□□ -2.05
NUP100YKL068W ETT1Q08421 412 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W AEP3Q12089 606 aa2.27□□□□□ -2.05
NUP100YKL068W SFG1Q12507 346 aa2.27□□□□□ -2.05
NUP100YKL068W LAM4P38800 1345 aa2.27□□□□□ -2.05
NUP100YKL068W CDC37P06101 506 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W PDE2P06776 526 aa2.27□□□□□ -2.05
NUP100YKL068W ILV2P07342 687 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W RSR1P13856 272 aa2.27□□□□□ -2.05
NUP100YKL068W FUS3P16892 353 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W SAG1P20840 650 aa2.27□□□□□ -2.05
NUP100YKL068W SEC62P21825 274 aa2.27□□□□□ -2.05
NUP100YKL068W SEC15P22224 910 aa2.27□□□□□ -2.05
NUP100YKL068W VMA16P23968 213 aa2.27□□□□□ -2.05
NUP100YKL068W PEX1P24004 1043 aa2.27□□□□□ -2.05
NUP100YKL068W KIN82P25341 720 aa2.27□□□□□ -2.05
NUP100YKL068W PPZ1P26570 692 aa2.27□□□□□ -2.05
NUP100YKL068W IDH2P28241 369 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W ERG1P32476 496 aaKnown RBP2.27□□□□□ -2.05
NUP100YKL068W SRB5P32585 307 aa2.27□□□□□ -2.05
NUP100YKL068W SEC66P33754 206 aa2.27□□□□□ -2.05
NUP100YKL068W AGP2P38090 596 aa2.27□□□□□ -2.05
NUP100YKL068W RFC5P38251 354 aa2.27□□□□□ -2.05
NUP100YKL068W GDT1P38301 280 aaPredicted RBP2.27□□□□□ -2.05
NUP100YKL068W YHR045WP38775 560 aa2.27□□□□□ -2.05
NUP100YKL068W END3P39013 349 aa2.27□□□□□ -2.05
NUP100YKL068W NMD5P46970 1048 aa2.27□□□□□ -2.05
NUP100YKL068W RPA34P47006 233 aaPredicted RBP2.27□□□□□ -2.05
NUP100YKL068W YGR126WP53274 230 aa2.27□□□□□ -2.05
NUP100YKL068W YPL062WQ02781 134 aa2.27□□□□□ -2.05
NUP100YKL068W YMR102CQ03177 834 aa2.27□□□□□ -2.05
NUP100YKL068W SIZ1Q04195 904 aa2.27□□□□□ -2.05
NUP100YKL068W STE23Q06010 1027 aa2.27□□□□□ -2.05
NUP100YKL068W FMP40Q08968 688 aaPredicted RBP2.27□□□□□ -2.05
NUP100YKL068W NDJ1Q12366 352 aa2.27□□□□□ -2.05
NUP100YKL068W POM34Q12445 299 aa2.27□□□□□ -2.05
NUP100YKL068W GPA1P08539 472 aa2.26□□□□□ -2.05
NUP100YKL068W SRV2P17555 526 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W UGA1P17649 471 aa2.26□□□□□ -2.05
NUP100YKL068W CLC1P17891 233 aa2.26□□□□□ -2.05
NUP100YKL068W CLN1P20437 546 aa2.26□□□□□ -2.05
NUP100YKL068W ADY2P25613 283 aa2.26□□□□□ -2.05
NUP100YKL068W YIM1P28625 365 aa2.26□□□□□ -2.05
NUP100YKL068W UGP1P32861 499 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W ATP3P38077 311 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W ZTA1P38230 334 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W GET2P40056 285 aa2.26□□□□□ -2.05
NUP100YKL068W TMN3P40071 706 aa2.26□□□□□ -2.05
NUP100YKL068W MSS2P40990 351 aa2.26□□□□□ -2.05
NUP100YKL068W RAV1P47104 1357 aa2.26□□□□□ -2.05
NUP100YKL068W MRK1P50873 501 aa2.26□□□□□ -2.05
NUP100YKL068W STR3P53101 465 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W YGL114WP53134 725 aa2.26□□□□□ -2.05
NUP100YKL068W EFM5P53200 248 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W IMO32P53219 342 aa2.26□□□□□ -2.05
NUP100YKL068W PET117Q02771 107 aa2.26□□□□□ -2.05
NUP100YKL068W MSC2Q03455 724 aa2.26□□□□□ -2.05
NUP100YKL068W USA1Q03714 838 aa2.26□□□□□ -2.05
NUP100YKL068W YMR130WQ04223 302 aa2.26□□□□□ -2.05
NUP100YKL068W RGC1Q06108 1083 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W VAC14Q06708 880 aa2.26□□□□□ -2.05
NUP100YKL068W CRT10Q08226 957 aa2.26□□□□□ -2.05
NUP100YKL068W PRS5Q12265 496 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W APC2Q12440 853 aa2.26□□□□□ -2.05
NUP100YKL068W RPO41P13433 1351 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W RTC1Q08281 1341 aa2.26□□□□□ -2.05
NUP100YKL068W PET111P08468 800 aa2.26□□□□□ -2.05
NUP100YKL068W TUB3P09734 445 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W MCM4P30665 933 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W NDI1P32340 513 aa2.26□□□□□ -2.05
NUP100YKL068W SSE2P32590 693 aaKnown RBP2.26□□□□□ -2.05
NUP100YKL068W DSS4P32601 143 aa2.26□□□□□ -2.05
NUP100YKL068W AIM26P32858 118 aa2.26□□□□□ -2.05
NUP100YKL068W BMH2P34730 273 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms