RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	AMD1	P15274	810 aa	Known RBP	2.28	□□□□□ -2.04
NUP82	YJL061W	ROX1	P25042	368 aa		2.28	□□□□□ -2.04
NUP82	YJL061W	PMT1	P33775	817 aa		2.28	□□□□□ -2.04
NUP82	YJL061W	ELP2	P42935	788 aa		2.28	□□□□□ -2.04
NUP82	YJL061W	RTT101	P47050	842 aa		2.28	□□□□□ -2.04
NUP82	YJL061W	IRC15	Q02733	499 aa		2.28	□□□□□ -2.04
NUP82	YJL061W	RBS1	Q05672	457 aa	Known RBP	2.28	□□□□□ -2.04
NUP82	YJL061W	PPT2	Q12036	173 aa		2.28	□□□□□ -2.04
NUP82	YJL061W	CYB2	P00175	591 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	CBP4	P37267	147 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	SMF1	P38925	575 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	DHH1	P39517	506 aa	Known RBP	2.27	□□□□□ -2.05
NUP82	YJL061W	OCA1	P50946	238 aa	Predicted RBP	2.27	□□□□□ -2.05
NUP82	YJL061W	RLI1	Q03195	608 aa	Known RBP	2.27	□□□□□ -2.05
NUP82	YJL061W	TAF11	Q04226	346 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	ERP1	Q05359	219 aa	Known RBP	2.27	□□□□□ -2.05
NUP82	YJL061W	YLR287C	Q05881	355 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	CFT2	Q12102	859 aa	Predicted RBP	2.27	□□□□□ -2.05
NUP82	YJL061W	SFI1	Q12369	946 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	GRX6	Q12438	231 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	RPL15A	P05748	204 aa	Known RBP	2.27	□□□□□ -2.05
NUP82	YJL061W	GLK1	P17709	500 aa	Known RBP	2.27	□□□□□ -2.05
NUP82	YJL061W	RAD14	P28519	371 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	SPC110	P32380	944 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	POP1	P41812	875 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	YGL108C	P53139	140 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	SLG1	P54867	378 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	SCM3	Q12334	223 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	RTN2	Q12443	393 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	SET6	Q12529	373 aa		2.27	□□□□□ -2.05
NUP82	YJL061W	MES1	P00958	751 aa	Known RBP	2.26	□□□□□ -2.05
NUP82	YJL061W	RHO2	P06781	192 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	PHO2	P07269	559 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	BUD14	P27637	709 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	NPL6	P32832	435 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	MFT1	P33441	392 aa	Known RBP	2.26	□□□□□ -2.05
NUP82	YJL061W	RPH1	P39956	796 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	SHO1	P40073	367 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	GIR2	Q03768	265 aa	Predicted RBP	2.26	□□□□□ -2.05
NUP82	YJL061W	SYF1	Q04048	859 aa	Predicted RBP	2.26	□□□□□ -2.05
NUP82	YJL061W	KEL3	Q08979	651 aa	Predicted RBP	2.26	□□□□□ -2.05
NUP82	YJL061W	SPS4	P09937	338 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	RPL20A	P0CX23	172 aa	Known RBP	2.26	□□□□□ -2.05
NUP82	YJL061W	RPL20B	P0CX24	172 aa	Predicted RBP	2.26	□□□□□ -2.05
NUP82	YJL061W	CLB3	P24870	427 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	AFG1	P32317	509 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	ATP11	P32453	318 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	GYP6	P32806	458 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	REC114	P32841	428 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	RSM22	P36056	628 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	CCT4	P39078	528 aa	Known RBP	2.26	□□□□□ -2.05
NUP82	YJL061W	NOC2	P39744	710 aa	Known RBP	2.26	□□□□□ -2.05
NUP82	YJL061W	ALG8	P40351	577 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	YJL213W	P40896	331 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	SPC19	Q03954	165 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	VTA1	Q06263	330 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	YMR230W-A	Q3E7B5	62 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	YBR298C-A	Q8TGK4	73 aa		2.26	□□□□□ -2.05
NUP82	YJL061W	LEU4	P06208	619 aa	Known RBP	2.25	□□□□□ -2.05
NUP82	YJL061W	ATR1	P13090	542 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	CLC1	P17891	233 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	FUR1	P18562	216 aa	Known RBP	2.25	□□□□□ -2.05
NUP82	YJL061W	SPB1	P25582	841 aa	Predicted RBP	2.25	□□□□□ -2.05
NUP82	YJL061W	ERG3	P32353	365 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	PMU1	P36069	295 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	MTC4	P38335	694 aa	Known RBP	2.25	□□□□□ -2.05
NUP82	YJL061W	FAU1	P40099	211 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	RPR2	P40571	144 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	YFR016C	P43597	1233 aa	Known RBP	2.25	□□□□□ -2.05
NUP82	YJL061W	YGR149W	P48236	432 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	YDL186W	P48568	277 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	RMD9	P53140	646 aa	Known RBP	2.25	□□□□□ -2.05
NUP82	YJL061W	MNP1	P53163	194 aa	Predicted RBP	2.25	□□□□□ -2.05
NUP82	YJL061W	TAP42	Q04372	366 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	SOV1	Q04748	898 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	RTT103	Q05543	409 aa		2.25	□□□□□ -2.05
NUP82	YJL061W	BUB3	P26449	341 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	YBP1	P38315	674 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	SYG1	P40528	902 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	VTC2	P43585	828 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	GWT1	P47026	490 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	AYT1	Q12226	474 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	GDH1	P07262	454 aa	Known RBP	2.24	□□□□□ -2.05
NUP82	YJL061W	RPL3	P14126	387 aa	Known RBP	2.24	□□□□□ -2.05
NUP82	YJL061W	FUN19	P28003	413 aa	Predicted RBP	2.24	□□□□□ -2.05
NUP82	YJL061W	NFU1	P32860	256 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	LOS1	P33418	1100 aa	Predicted RBP	2.24	□□□□□ -2.05
NUP82	YJL061W	TUL1	P36096	758 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	HAT2	P39984	401 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	DLD2	P46681	530 aa	Known RBP	2.24	□□□□□ -2.05
NUP82	YJL061W	COS10	P52924	374 aa		2.24	□□□□□ -2.05
NUP82	YJL061W	NCS2	P53923	493 aa	Predicted RBP	2.24	□□□□□ -2.05
NUP82	YJL061W	YTH1	Q06102	208 aa	Predicted RBP	2.24	□□□□□ -2.05
NUP82	YJL061W	REC107	P21651	314 aa		2.23	□□□□□ -2.05
NUP82	YJL061W	MCK1	P21965	375 aa	Known RBP	2.23	□□□□□ -2.05
NUP82	YJL061W	PUT3	P25502	979 aa	Predicted RBP	2.23	□□□□□ -2.05
NUP82	YJL061W	IDH2	P28241	369 aa	Known RBP	2.23	□□□□□ -2.05
NUP82	YJL061W	CRM1	P30822	1084 aa	Known RBP	2.23	□□□□□ -2.05
NUP82	YJL061W	ATS1	P31386	333 aa		2.23	□□□□□ -2.05
NUP82	YJL061W	HCS1	P34243	683 aa		2.23	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms