RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C ERV46P39727 415 aa7.43□□□□□ -1.22
SNP1YIL061C MTW1P39731 289 aa7.43□□□□□ -1.22
SNP1YIL061C RSP5P39940 809 aaKnown RBP7.43□□□□□ -1.22
SNP1YIL061C MPH1P40562 993 aa7.43□□□□□ -1.22
SNP1YIL061C YJR149WP47177 404 aa7.43□□□□□ -1.22
SNP1YIL061C MTO1P53070 669 aa7.43□□□□□ -1.22
SNP1YIL061C YNR068CP53754 272 aa7.43□□□□□ -1.22
SNP1YIL061C YNL260CP53846 198 aa7.43□□□□□ -1.22
SNP1YIL061C SPR6Q01684 191 aa7.43□□□□□ -1.22
SNP1YIL061C PRP3Q03338 469 aaPredicted RBP7.43□□□□□ -1.22
SNP1YIL061C SSQ1Q05931 657 aaPredicted RBP7.43□□□□□ -1.22
SNP1YIL061C GPI11Q06636 219 aa7.43□□□□□ -1.22
SNP1YIL061C GRS2Q06817 618 aa7.43□□□□□ -1.22
SNP1YIL061C YOL131WQ08270 108 aa7.43□□□□□ -1.22
SNP1YIL061C PFK27Q12471 397 aaPredicted RBP7.43□□□□□ -1.22
SNP1YIL061C COR1P07256 457 aa7.42□□□□□ -1.22
SNP1YIL061C CLN2P20438 545 aa7.42□□□□□ -1.22
SNP1YIL061C SGV1P23293 657 aaKnown RBP7.42□□□□□ -1.22
SNP1YIL061C ATP11P32453 318 aa7.42□□□□□ -1.22
SNP1YIL061C TIF3P34167 436 aaKnown RBP7.42□□□□□ -1.22
SNP1YIL061C EMC3P36039 253 aa7.42□□□□□ -1.22
SNP1YIL061C YBR285WP38354 144 aa7.42□□□□□ -1.22
SNP1YIL061C NEM1P38757 446 aa7.42□□□□□ -1.22
SNP1YIL061C RBG1P39729 369 aa7.42□□□□□ -1.22
SNP1YIL061C OSW5P40219 148 aa7.42□□□□□ -1.22
SNP1YIL061C RIC1P40395 1056 aa7.42□□□□□ -1.22
SNP1YIL061C SER33P40510 469 aa7.42□□□□□ -1.22
SNP1YIL061C ELP2P42935 788 aa7.42□□□□□ -1.22
SNP1YIL061C GYP8P43570 497 aa7.42□□□□□ -1.22
SNP1YIL061C MET12P46151 657 aa7.42□□□□□ -1.22
SNP1YIL061C AIM22P47051 409 aa7.42□□□□□ -1.22
SNP1YIL061C YJR030CP47101 745 aa7.42□□□□□ -1.22
SNP1YIL061C COG7P53195 279 aa7.42□□□□□ -1.22
SNP1YIL061C ZRG17P53735 605 aa7.42□□□□□ -1.22
SNP1YIL061C TGL2P54857 326 aa7.42□□□□□ -1.22
SNP1YIL061C GIP3Q03016 1276 aa7.42□□□□□ -1.22
SNP1YIL061C RAD30Q04049 632 aa7.42□□□□□ -1.22
SNP1YIL061C EMI1Q04406 187 aa7.42□□□□□ -1.22
SNP1YIL061C YMR226CQ05016 267 aaKnown RBP7.42□□□□□ -1.22
SNP1YIL061C MFG1Q07684 458 aa7.42□□□□□ -1.22
SNP1YIL061C YLL007CQ07799 665 aa7.42□□□□□ -1.22
SNP1YIL061C SGO1Q08490 590 aa7.42□□□□□ -1.22
SNP1YIL061C YOL159C-AQ3E769 90 aa7.42□□□□□ -1.22
SNP1YIL061C TY4B-PA0A0B7P3V8 1104 aa7.41□□□□□ -1.22
SNP1YIL061C RAD7P06779 565 aa7.41□□□□□ -1.22
SNP1YIL061C MSF1P08425 469 aa7.41□□□□□ -1.22
SNP1YIL061C DAP2P18962 818 aa7.41□□□□□ -1.22
SNP1YIL061C RDS2P19541 446 aaKnown RBP7.41□□□□□ -1.22
SNP1YIL061C YAP1P19880 650 aaKnown RBP7.41□□□□□ -1.22
SNP1YIL061C PRI2P20457 528 aa7.41□□□□□ -1.22
SNP1YIL061C FAR1P21268 830 aa7.41□□□□□ -1.22
SNP1YIL061C GBP2P25555 427 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
SNP1YIL061C PTP2P29461 750 aa7.41□□□□□ -1.22
SNP1YIL061C CDC3P32457 520 aaKnown RBP7.41□□□□□ -1.22
SNP1YIL061C HXT4P32467 576 aa7.41□□□□□ -1.22
SNP1YIL061C CDC5P32562 705 aa7.41□□□□□ -1.22
SNP1YIL061C PEP12P32854 288 aa7.41□□□□□ -1.22
SNP1YIL061C STE5P32917 917 aa7.41□□□□□ -1.22
SNP1YIL061C RIB1P38066 345 aa7.41□□□□□ -1.22
SNP1YIL061C YHR127WP38833 243 aaKnown RBP7.41□□□□□ -1.22
SNP1YIL061C HXT6P39003 570 aaKnown RBP7.41□□□□□ -1.22
SNP1YIL061C HXT7P39004 570 aa7.41□□□□□ -1.22
SNP1YIL061C CAB2P40506 365 aa7.41□□□□□ -1.22
SNP1YIL061C BNI4P53858 892 aa7.41□□□□□ -1.22
SNP1YIL061C IMP4P53941 290 aaKnown RBP7.41□□□□□ -1.22
SNP1YIL061C TMA20P89886 181 aaPredicted RBP7.41□□□□□ -1.22
SNP1YIL061C MET31Q03081 177 aa7.41□□□□□ -1.22
SNP1YIL061C YMR010WQ03687 405 aa7.41□□□□□ -1.22
SNP1YIL061C YDR179W-AQ03983 463 aa7.41□□□□□ -1.22
SNP1YIL061C YMR034CQ05131 434 aaPredicted RBP7.41□□□□□ -1.22
SNP1YIL061C BSC2Q05611 235 aa7.41□□□□□ -1.22
SNP1YIL061C NDL1Q06568 189 aa7.41□□□□□ -1.22
SNP1YIL061C YPR011CQ12251 326 aa7.41□□□□□ -1.22
SNP1YIL061C RHO1P06780 209 aaKnown RBP7.4□□□□□ -1.22
SNP1YIL061C SLM5P25345 492 aaKnown RBP7.4□□□□□ -1.22
SNP1YIL061C PEX3P28795 441 aa7.4□□□□□ -1.22
SNP1YIL061C RPC82P32349 654 aa7.4□□□□□ -1.22
SNP1YIL061C ARP2P32381 391 aaKnown RBP7.4□□□□□ -1.22
SNP1YIL061C CYS4P32582 507 aaKnown RBP7.4□□□□□ -1.22
SNP1YIL061C ATG7P38862 630 aa7.4□□□□□ -1.22
SNP1YIL061C SWD1P39706 426 aa7.4□□□□□ -1.22
SNP1YIL061C YFR018CP43599 363 aa7.4□□□□□ -1.22
SNP1YIL061C ATP22P50273 684 aaPredicted RBP7.4□□□□□ -1.22
SNP1YIL061C AAT1Q01802 451 aa7.4□□□□□ -1.22
SNP1YIL061C ARX1Q03862 593 aaKnown RBP7.4□□□□□ -1.22
SNP1YIL061C RPC11Q04307 110 aaPredicted RBP7.4□□□□□ -1.22
SNP1YIL061C NSE1Q07913 336 aa7.4□□□□□ -1.22
SNP1YIL061C LOT6Q07923 191 aa7.4□□□□□ -1.22
SNP1YIL061C NMD4Q12129 218 aa7.4□□□□□ -1.22
SNP1YIL061C WTM1Q12363 437 aaKnown RBP7.4□□□□□ -1.22
SNP1YIL061C SNF8Q12483 233 aa7.4□□□□□ -1.22
SNP1YIL061C MHF2Q3E829 80 aa7.4□□□□□ -1.22
SNP1YIL061C SRN2Q99176 213 aa7.4□□□□□ -1.22
SNP1YIL061C MPD2Q99316 277 aa7.4□□□□□ -1.22
SNP1YIL061C Q0010Q9ZZX9 128 aa7.4□□□□□ -1.22
SNP1YIL061C YPR096CO13587 100 aa7.39□□□□□ -1.23
SNP1YIL061C GAL3P13045 520 aa7.39□□□□□ -1.23
SNP1YIL061C KSS1P14681 368 aa7.39□□□□□ -1.23
SNP1YIL061C CNA1P23287 553 aa7.39□□□□□ -1.23
SNP1YIL061C ZUO1P32527 433 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms