RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C TRM2P33753 639 aa2.72□□□□□ -1.97
PRP8YHR165C YRA2P36036 203 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
PRP8YHR165C ADD66P36040 267 aa2.72□□□□□ -1.97
PRP8YHR165C YBR225WP38321 900 aa2.72□□□□□ -1.97
PRP8YHR165C YHR202WP38887 602 aa2.72□□□□□ -1.97
PRP8YHR165C MNN1P39106 762 aa2.72□□□□□ -1.97
PRP8YHR165C HAT2P39984 401 aa2.72□□□□□ -1.97
PRP8YHR165C YEL025CP39991 1188 aa2.72□□□□□ -1.97
PRP8YHR165C YGL036WP53185 909 aaPredicted RBP2.72□□□□□ -1.97
PRP8YHR165C ORM1P53224 222 aa2.72□□□□□ -1.97
PRP8YHR165C BSC5P53755 489 aa2.72□□□□□ -1.97
PRP8YHR165C ERG13P54839 491 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C MSC1Q03104 513 aa2.72□□□□□ -1.97
PRP8YHR165C YMR279CQ03263 540 aa2.72□□□□□ -1.97
PRP8YHR165C HPT1Q04178 221 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C HRK1Q08732 759 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C FEX2Q08991 375 aa2.72□□□□□ -1.97
PRP8YHR165C HAL9Q12180 1030 aa2.72□□□□□ -1.97
PRP8YHR165C RGT2Q12300 763 aa2.72□□□□□ -1.97
PRP8YHR165C YJR112W-AQ3E743 109 aa2.72□□□□□ -1.97
PRP8YHR165C TSC13Q99190 310 aa2.72□□□□□ -1.97
PRP8YHR165C QCR7P00128 127 aa2.72□□□□□ -1.97
PRP8YHR165C ERG11P10614 530 aa2.72□□□□□ -1.97
PRP8YHR165C STE12P13574 688 aa2.72□□□□□ -1.97
PRP8YHR165C MIP1P15801 1254 aa2.72□□□□□ -1.97
PRP8YHR165C MDL2P33311 773 aa2.72□□□□□ -1.97
PRP8YHR165C TSA1P34760 196 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C NTR2P36118 322 aaPredicted RBP2.72□□□□□ -1.97
PRP8YHR165C YBL086CP38177 466 aa2.72□□□□□ -1.97
PRP8YHR165C SMF2P38778 549 aa2.72□□□□□ -1.97
PRP8YHR165C NVJ1P38881 321 aa2.72□□□□□ -1.97
PRP8YHR165C SMF1P38925 575 aa2.72□□□□□ -1.97
PRP8YHR165C KTR7P40504 517 aa2.72□□□□□ -1.97
PRP8YHR165C SNL1P40548 159 aa2.72□□□□□ -1.97
PRP8YHR165C AZF1P41696 914 aa2.72□□□□□ -1.97
PRP8YHR165C LSM8P47093 109 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C YJR079WP47126 109 aa2.72□□□□□ -1.97
PRP8YHR165C AMA1P50082 593 aa2.72□□□□□ -1.97
PRP8YHR165C PSP1P50896 841 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C SNP1Q00916 300 aaPredicted RBP2.72□□□□□ -1.97
PRP8YHR165C YMR102CQ03177 834 aa2.72□□□□□ -1.97
PRP8YHR165C NGL2Q03264 515 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C ISA2Q12425 185 aa2.72□□□□□ -1.97
PRP8YHR165C CBP1P07252 654 aa2.72□□□□□ -1.97
PRP8YHR165C RSR1P13856 272 aa2.72□□□□□ -1.97
PRP8YHR165C DBP5P20449 482 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C SRP40P32583 406 aaPredicted RBP2.72□□□□□ -1.97
PRP8YHR165C RIB7P33312 244 aa2.72□□□□□ -1.97
PRP8YHR165C ALY1P36117 915 aa2.72□□□□□ -1.97
PRP8YHR165C ECM8P38246 354 aa2.72□□□□□ -1.97
PRP8YHR165C AFG3P39925 761 aa2.72□□□□□ -1.97
PRP8YHR165C SAH1P39954 449 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C LAS21P40367 830 aa2.72□□□□□ -1.97
PRP8YHR165C GTS1P40956 396 aa2.72□□□□□ -1.97
PRP8YHR165C MCM22P47167 239 aa2.72□□□□□ -1.97
PRP8YHR165C NGL3Q03210 505 aa2.72□□□□□ -1.97
PRP8YHR165C CAB1Q04430 367 aa2.72□□□□□ -1.97
PRP8YHR165C GFD1Q04839 188 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C RNH202Q05635 350 aa2.72□□□□□ -1.97
PRP8YHR165C BNA5Q05979 453 aa2.72□□□□□ -1.97
PRP8YHR165C FEX1Q08913 375 aa2.72□□□□□ -1.97
PRP8YHR165C GAL1P04385 528 aa2.72□□□□□ -1.97
PRP8YHR165C TRP4P07285 380 aaPredicted RBP2.72□□□□□ -1.97
PRP8YHR165C RPC40P07703 335 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C TUB1P09733 447 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C GFD2P25370 566 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C UBP11P36026 717 aa2.72□□□□□ -1.97
PRP8YHR165C STV1P37296 890 aa2.72□□□□□ -1.97
PRP8YHR165C RMD6P39975 231 aa2.72□□□□□ -1.97
PRP8YHR165C PIC2P40035 300 aa2.72□□□□□ -1.97
PRP8YHR165C BAP3P41815 604 aa2.72□□□□□ -1.97
PRP8YHR165C TRS85P46944 698 aa2.72□□□□□ -1.97
PRP8YHR165C CPR7P47103 393 aa2.72□□□□□ -1.97
PRP8YHR165C VPS25P47142 202 aa2.72□□□□□ -1.97
PRP8YHR165C YGR017WP53210 297 aa2.72□□□□□ -1.97
PRP8YHR165C BNA7Q04066 261 aa2.72□□□□□ -1.97
PRP8YHR165C ATG34Q12292 412 aa2.72□□□□□ -1.97
PRP8YHR165C BNI1P41832 1953 aa2.72□□□□□ -1.97
PRP8YHR165C GCN4P03069 281 aa2.72□□□□□ -1.97
PRP8YHR165C STE3P06783 470 aa2.72□□□□□ -1.97
PRP8YHR165C RIP1P08067 215 aa2.72□□□□□ -1.97
PRP8YHR165C HMG1P12683 1054 aa2.72□□□□□ -1.97
PRP8YHR165C SNF6P18888 332 aa2.72□□□□□ -1.97
PRP8YHR165C CHS3P29465 1165 aa2.72□□□□□ -1.97
PRP8YHR165C VID24P38263 362 aa2.72□□□□□ -1.97
PRP8YHR165C PIH1P38768 344 aa2.72□□□□□ -1.97
PRP8YHR165C MDM31P38880 579 aa2.72□□□□□ -1.97
PRP8YHR165C LYS9P38999 446 aa2.72□□□□□ -1.97
PRP8YHR165C PAC1P39946 494 aaKnown RBP2.72□□□□□ -1.97
PRP8YHR165C ELP2P42935 788 aa2.72□□□□□ -1.97
PRP8YHR165C YGR273CP53329 174 aa2.72□□□□□ -1.97
PRP8YHR165C YTP1P53584 459 aa2.72□□□□□ -1.97
PRP8YHR165C CWC24P53769 259 aa2.72□□□□□ -1.97
PRP8YHR165C GIP3Q03016 1276 aa2.72□□□□□ -1.97
PRP8YHR165C FAR8Q05040 523 aa2.72□□□□□ -1.97
PRP8YHR165C YCL012CQ8J0M4 134 aa2.72□□□□□ -1.97
PRP8YHR165C VCX1Q99385 411 aa2.72□□□□□ -1.97
PRP8YHR165C SUC2P00724 532 aa2.71□□□□□ -1.97
PRP8YHR165C TRP2P00899 507 aaKnown RBP2.71□□□□□ -1.97
PRP8YHR165C DSF1P0CX08 502 aa2.71□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms