RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C MES1P00958 751 aaKnown RBP3.76□□□□□ -1.81
CUP1-2YHR055C PUT3P25502 979 aaPredicted RBP3.76□□□□□ -1.81
CUP1-2YHR055C MRE11P32829 692 aa3.76□□□□□ -1.81
CUP1-2YHR055C HAT2P39984 401 aa3.76□□□□□ -1.81
CUP1-2YHR055C POP1P41812 875 aa3.76□□□□□ -1.81
CUP1-2YHR055C GWT1P47026 490 aa3.76□□□□□ -1.81
CUP1-2YHR055C URB2P47108 1174 aa3.76□□□□□ -1.81
CUP1-2YHR055C IMH1Q06704 911 aaKnown RBP3.76□□□□□ -1.81
CUP1-2YHR055C RSA1Q08932 381 aa3.76□□□□□ -1.81
CUP1-2YHR055C SEC39Q12745 709 aa3.76□□□□□ -1.81
CUP1-2YHR055C LPD1P09624 499 aaKnown RBP3.75□□□□□ -1.81
CUP1-2YHR055C MET8P15807 274 aa3.75□□□□□ -1.81
CUP1-2YHR055C MFT1P33441 392 aaKnown RBP3.75□□□□□ -1.81
CUP1-2YHR055C CBP4P37267 147 aa3.75□□□□□ -1.81
CUP1-2YHR055C MET28P40573 187 aa3.75□□□□□ -1.81
CUP1-2YHR055C ARE2P53629 642 aaKnown RBP3.75□□□□□ -1.81
CUP1-2YHR055C BOR1P53838 576 aa3.75□□□□□ -1.81
CUP1-2YHR055C PDS5Q04264 1277 aa3.75□□□□□ -1.81
CUP1-2YHR055C MFB1Q04922 465 aa3.75□□□□□ -1.81
CUP1-2YHR055C YLL056CQ12177 298 aa3.75□□□□□ -1.81
CUP1-2YHR055C YDL007C-AQ2V2Q0 85 aa3.75□□□□□ -1.81
CUP1-2YHR055C TOP1P04786 769 aa3.74□□□□□ -1.81
CUP1-2YHR055C RPL31BP0C2H9 113 aaKnown RBP3.74□□□□□ -1.81
CUP1-2YHR055C AVT5P38176 459 aa3.74□□□□□ -1.81
CUP1-2YHR055C ARF3P40994 183 aaRIP-Chip data3.74□□□□□ -1.81not detected
CUP1-2YHR055C OCA1P50946 238 aaPredicted RBP3.74□□□□□ -1.81
CUP1-2YHR055C TWF1P53250 332 aa3.74□□□□□ -1.81
CUP1-2YHR055C WSC2P53832 503 aa3.74□□□□□ -1.81
CUP1-2YHR055C RRI2Q12348 645 aa3.74□□□□□ -1.81
CUP1-2YHR055C CTF3Q12748 733 aa3.74□□□□□ -1.81
CUP1-2YHR055C YML133CQ03099 1374 aa3.74□□□□□ -1.81
CUP1-2YHR055C YLL067CQ07888 1374 aa3.74□□□□□ -1.81
CUP1-2YHR055C YLL066CQ99208 1374 aa3.74□□□□□ -1.81
CUP1-2YHR055C FRE2P36033 711 aa3.73□□□□□ -1.81
CUP1-2YHR055C PCA1P38360 1216 aa3.73□□□□□ -1.81
CUP1-2YHR055C TIF5P38431 405 aaKnown RBP3.73□□□□□ -1.81
CUP1-2YHR055C SPO22P40511 975 aa3.73□□□□□ -1.81
CUP1-2YHR055C MSO1P53604 210 aaKnown RBP3.73□□□□□ -1.81
CUP1-2YHR055C TLG2Q08144 397 aa3.73□□□□□ -1.81
CUP1-2YHR055C BUD21Q08492 214 aaPredicted RBP3.73□□□□□ -1.81
CUP1-2YHR055C HNT3Q08702 217 aa3.73□□□□□ -1.81
CUP1-2YHR055C KEL3Q08979 651 aaPredicted RBP3.73□□□□□ -1.81
CUP1-2YHR055C MED1Q12321 566 aa3.73□□□□□ -1.81
CUP1-2YHR055C LEU4P06208 619 aaKnown RBP3.72□□□□□ -1.81
CUP1-2YHR055C MRP7P12687 371 aa3.72□□□□□ -1.81
CUP1-2YHR055C CPR1P14832 162 aaKnown RBP3.72□□□□□ -1.81
CUP1-2YHR055C BUB3P26449 341 aa3.72□□□□□ -1.81
CUP1-2YHR055C CRM1P30822 1084 aaKnown RBP3.72□□□□□ -1.81
CUP1-2YHR055C ATP11P32453 318 aa3.72□□□□□ -1.81
CUP1-2YHR055C YEL057CP39983 233 aa3.72□□□□□ -1.81
CUP1-2YHR055C SUB1P54000 292 aaKnown RBP3.72□□□□□ -1.81
CUP1-2YHR055C TIM10P87108 93 aa3.72□□□□□ -1.81
CUP1-2YHR055C ATG29Q12092 213 aa3.72□□□□□ -1.81
CUP1-2YHR055C RKM5Q12367 367 aa3.72□□□□□ -1.81
CUP1-2YHR055C YCL021W-AQ96VH3 125 aa3.72□□□□□ -1.81
CUP1-2YHR055C ARG3P05150 338 aa3.71□□□□□ -1.82
CUP1-2YHR055C PMR1P13586 950 aa3.71□□□□□ -1.82
CUP1-2YHR055C FUN19P28003 413 aaPredicted RBP3.71□□□□□ -1.82
CUP1-2YHR055C CMC1P36064 111 aa3.71□□□□□ -1.82
CUP1-2YHR055C VID24P38263 362 aa3.71□□□□□ -1.82
CUP1-2YHR055C UTP9P38882 575 aaKnown RBP3.71□□□□□ -1.82
CUP1-2YHR055C FAU1P40099 211 aa3.71□□□□□ -1.82
CUP1-2YHR055C MKT1P40850 830 aaKnown RBP3.71□□□□□ -1.82
CUP1-2YHR055C YPI1P43587 155 aa3.71□□□□□ -1.82
CUP1-2YHR055C YGL242CP53066 181 aa3.71□□□□□ -1.82
CUP1-2YHR055C OGG1P53397 376 aaPredicted RBP3.71□□□□□ -1.82
CUP1-2YHR055C CAF40P53829 373 aa3.71□□□□□ -1.82
CUP1-2YHR055C SLG1P54867 378 aa3.71□□□□□ -1.82
CUP1-2YHR055C PIR3Q03180 325 aa3.71□□□□□ -1.82
CUP1-2YHR055C MRD1Q06106 887 aaKnown RBP3.71□□□□□ -1.82
CUP1-2YHR055C RIM20Q12033 661 aa3.71□□□□□ -1.82
CUP1-2YHR055C NDI1P32340 513 aa3.7□□□□□ -1.82
CUP1-2YHR055C MRP4P32902 394 aa3.7□□□□□ -1.82
CUP1-2YHR055C YOX1P34161 385 aa3.7□□□□□ -1.82
CUP1-2YHR055C SDS24P38314 527 aa3.7□□□□□ -1.82
CUP1-2YHR055C SYG1P40528 902 aa3.7□□□□□ -1.82
CUP1-2YHR055C YFL067WP43537 175 aa3.7□□□□□ -1.82
CUP1-2YHR055C RHO2P06781 192 aa3.69□□□□□ -1.82
CUP1-2YHR055C YAR066WP0CX18 203 aa3.69□□□□□ -1.82
CUP1-2YHR055C YHR214WP0CX19 203 aa3.69□□□□□ -1.82
CUP1-2YHR055C RAD14P28519 371 aa3.69□□□□□ -1.82
CUP1-2YHR055C REC114P32841 428 aa3.69□□□□□ -1.82
CUP1-2YHR055C ISC1P40015 477 aaKnown RBP3.69□□□□□ -1.82
CUP1-2YHR055C HXT14P42833 540 aa3.69□□□□□ -1.82
CUP1-2YHR055C YGL108CP53139 140 aa3.69□□□□□ -1.82
CUP1-2YHR055C SOV1Q04748 898 aa3.69□□□□□ -1.82
CUP1-2YHR055C GPI10P30777 616 aa3.68□□□□□ -1.82
CUP1-2YHR055C AFG1P32317 509 aa3.68□□□□□ -1.82
CUP1-2YHR055C PMT1P33775 817 aa3.68□□□□□ -1.82
CUP1-2YHR055C MET18P40469 1032 aa3.68□□□□□ -1.82
CUP1-2YHR055C AVT4P50944 713 aa3.68□□□□□ -1.82
CUP1-2YHR055C RMD9P53140 646 aaKnown RBP3.68□□□□□ -1.82
CUP1-2YHR055C POP6P53218 158 aa3.68□□□□□ -1.82
CUP1-2YHR055C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
CUP1-2YHR055C HIP1P06775 603 aa3.67□□□□□ -1.82
CUP1-2YHR055C RNA14P25298 677 aaKnown RBP3.67□□□□□ -1.82
CUP1-2YHR055C SPB1P25582 841 aaPredicted RBP3.67□□□□□ -1.82
CUP1-2YHR055C GLC7P32598 312 aaKnown RBP3.67□□□□□ -1.82
CUP1-2YHR055C GYP6P32806 458 aa3.67□□□□□ -1.82
CUP1-2YHR055C SEC66P33754 206 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms