RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRM3	YHR031C	RPL4A	P10664	362 aa	Known RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	GFA1	P14742	717 aa	Known RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	PFK1	P16861	987 aa	Known RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	CBP3	P21560	335 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	VBA3	P25594	458 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	PCL2	P25693	308 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	CMK1	P27466	446 aa	Known RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	MLS1	P30952	554 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	NDI1	P32340	513 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	PET309	P32522	965 aa	Predicted RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	DHR2	P36009	735 aa	Predicted RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	MAE1	P36013	669 aa	Known RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	MCM7	P38132	845 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	MAL32	P38158	584 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	STB5	P38699	743 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	NVJ1	P38881	321 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
RRM3	YHR031C	ATM1	P40416	690 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	YIL161W	P40449	235 aa	Known RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	ALR2	P43553	858 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	FET5	P43561	622 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	RSF2	P46974	1380 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	RPL4B	P49626	362 aa	Known RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	DIE2	P50076	525 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	ORC5	P50874	479 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	IMA1	P53051	589 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	YGL108C	P53139	140 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	LCL3	P53153	274 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	FMP48	P53233	369 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	TWF1	P53250	332 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	VOA1	P53262	265 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	MAL12	P53341	584 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	RMT2	Q03305	412 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	RCO1	Q04779	684 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	PEX10	Q05568	337 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	HDA2	Q06629	674 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	HBT1	Q07653	1046 aa	Known RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	COS7	Q07788	383 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	YEH1	Q07804	573 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	ZEO1	Q08245	113 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	DIA2	Q08496	732 aa	Predicted RBP	2.99	□□□□□ -1.93
RRM3	YHR031C	YPL150W	Q12152	901 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	YPR063C	Q12160	140 aa		2.99	□□□□□ -1.93
RRM3	YHR031C	YLR358C	O13565	187 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	CPA2	P03965	1118 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	RPP2A	P05319	106 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	HSF1	P10961	833 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	FBA1	P14540	359 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	AAC3	P18238	307 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	VPS33	P20795	691 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	SLY1	P22213	666 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	YSP3	P25036	478 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	CAM1	P29547	415 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	CCR4	P31384	837 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	NDC1	P32500	655 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	MSN4	P33749	630 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	MCD4	P36051	919 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	YBP1	P38315	674 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	AIM18	P38884	321 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	LYS9	P38999	446 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	PCL6	P40038	420 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	IMA5	P40884	581 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	DIM1	P41819	318 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	YJR096W	P47137	282 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	CTF18	P49956	741 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	NBP1	P52919	319 aa	Predicted RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	NSA1	P53136	463 aa	Predicted RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	ART5	P53244	586 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	RRP46	P53256	223 aa	Predicted RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	RSM27	P53305	110 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	YGR250C	P53316	781 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	SSU72	P53538	206 aa	Predicted RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	KTR6	P54070	446 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	SED5	Q01590	340 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	RSN1	Q03516	953 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	ACL4	Q03771	387 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	CSN9	Q03981	162 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	RQC1	Q05468	723 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	BOP2	Q06150	570 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	YPR147C	Q06522	304 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	UAF30	Q08747	228 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	FRE3	Q08905	711 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	KEL3	Q08979	651 aa	Predicted RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	HFI1	Q12060	488 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	YPL066W	Q12194	479 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	GLO4	Q12320	285 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	RPS24A	P0CX31	135 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	RPS24B	P0CX32	135 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	INO1	P11986	533 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	SRV2	P17555	526 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	RNR1	P21524	888 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	DBP2	P24783	546 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	GRR1	P24814	1151 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	IFM1	P25038	676 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	CPR4	P25334	318 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	SED4	P25365	1065 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	ILV6	P25605	309 aa	Known RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	IMG1	P25626	169 aa		2.98	□□□□□ -1.93
RRM3	YHR031C	HEM12	P32347	362 aa	Predicted RBP	2.98	□□□□□ -1.93
RRM3	YHR031C	SAC1	P32368	623 aa	Known RBP	2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms