RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeast

Gene RTA1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTA1	YGR213C	ITR2	P30606	609 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	NPL6	P32832	435 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	ATO2	P32907	282 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	BUD2	P33314	1104 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	PMT1	P33775	817 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	DED81	P38707	554 aa	Known RBP	4.05	□□□□□ -1.76
RTA1	YGR213C	VMA22	P38784	181 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	PCL6	P40038	420 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	YJR061W	P40355	935 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	YIL152W	P40455	235 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	DPH1	P40487	425 aa	Known RBP	4.05	□□□□□ -1.76
RTA1	YGR213C	LOC1	P43586	204 aa	Predicted RBP	4.05	□□□□□ -1.76
RTA1	YGR213C	ILM1	P47155	203 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	AAD10	P47182	288 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	TOM22	P49334	152 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	MIG2	P53035	382 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	CAF130	P53280	1122 aa	Predicted RBP	4.05	□□□□□ -1.76
RTA1	YGR213C	MEP3	P53390	489 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	YTP1	P53584	459 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	BOP3	P53958	396 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	DML1	Q03652	475 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	TLG2	Q08144	397 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	MED2	Q12124	431 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	ATG9	Q12142	997 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	ATP16	Q12165	160 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	MLP2	P40457	1679 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	TRM732	Q03496	1420 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
RTA1	YGR213C	RPL42A	P0CX27	106 aa	Known RBP	4.04	□□□□□ -1.76
RTA1	YGR213C	RPL42B	P0CX28	106 aa	Known RBP	4.04	□□□□□ -1.76
RTA1	YGR213C	RSR1	P13856	272 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	CLB3	P24870	427 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	GFD2	P25370	566 aa	Known RBP	4.04	□□□□□ -1.76
RTA1	YGR213C	YCR016W	P25617	290 aa	Known RBP	4.04	□□□□□ -1.76
RTA1	YGR213C	IMP2'	P32351	346 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	YME1	P32795	747 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	UTP11	P34247	250 aa	Predicted RBP	4.04	□□□□□ -1.76
RTA1	YGR213C	FZO1	P38297	855 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	STP2	P38704	541 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	UTP9	P38882	575 aa	Known RBP	4.04	□□□□□ -1.76
RTA1	YGR213C	VPS45	P38932	577 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	VID27	P40157	782 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	JEM1	P40358	645 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	AGX1	P43567	385 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	HAM1	P47119	197 aa	Known RBP	4.04	□□□□□ -1.76
RTA1	YGR213C	KAP114	P53067	1004 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	MRPL50	P53724	139 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	MAK10	Q02197	733 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	RPM2	Q02773	1202 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	SYF1	Q04048	859 aa	Predicted RBP	4.04	□□□□□ -1.76
RTA1	YGR213C	RBS1	Q05672	457 aa	Known RBP	4.04	□□□□□ -1.76
RTA1	YGR213C	ECI1	Q05871	280 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	SKG3	Q06315	1026 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	YPD1	Q07688	167 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	SIN3	P22579	1536 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	MDS3	P53094	1487 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	TAF2	P23255	1407 aa		4.04	□□□□□ -1.76
RTA1	YGR213C	YFL068W	P0CX99	160 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	YLL066W-A	P0CY00	160 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	YLL067W-A	P0CY01	160 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	TAL1	P15019	335 aa	Known RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	KRS1	P15180	591 aa	Known RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	ISY1	P21374	235 aa	Predicted RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	ZIP1	P31111	875 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	MCM10	P32354	571 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	RIB7	P33312	244 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	YKT6	P36015	200 aa	Known RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	YPT52	P36018	234 aa	Known RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	PEX32	P38292	413 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	MSR1	P38714	643 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	YAP3	P38749	330 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	LIN1	P38852	340 aa	Predicted RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	UIP3	P39547	235 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	AIM10	P39965	576 aa	Known RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	NOP16	P40007	231 aa	Known RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	PCL7	P40186	285 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	ZIM17	P42844	174 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	BNA6	P43619	295 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	ARC1	P46672	376 aa	Known RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	DPB11	P47027	764 aa	Predicted RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	YML6	P51998	286 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	LIF1	P53150	421 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	CGR1	P53188	120 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	NCS2	P53923	493 aa	Predicted RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	CIK1	Q01649	594 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	KAP120	Q02932	1032 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	IZH1	Q03419	316 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	ARP10	Q04549	284 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	YDR286C	Q05530	114 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	YOL159C	Q08300	171 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	SRL1	Q08673	210 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	DSE3	Q08729	430 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	HTZ1	Q12692	134 aa	Known RBP	4.03	□□□□□ -1.76
RTA1	YGR213C	CMC2	Q3E7A4	109 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	LAG2	Q92325	660 aa		4.03	□□□□□ -1.76
RTA1	YGR213C	AUS1	Q08409	1394 aa		4.02	□□□□□ -1.77
RTA1	YGR213C	DBF2	P22204	572 aa		4.02	□□□□□ -1.77
RTA1	YGR213C	PDB1	P32473	366 aa	Known RBP	4.02	□□□□□ -1.77
RTA1	YGR213C	SNU114	P36048	1008 aa	Known RBP	4.02	□□□□□ -1.77
RTA1	YGR213C	HEL1	P36113	551 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms