RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W YBP1P38315 674 aa2.39□□□□□ -2.03
PEX4YGR133W IMD2P38697 523 aaKnown RBP2.39□□□□□ -2.03
PEX4YGR133W YLF2P38746 405 aa2.39□□□□□ -2.03
PEX4YGR133W PCF11P39081 626 aaPredicted RBP2.39□□□□□ -2.03
PEX4YGR133W PES4P39684 611 aa2.39□□□□□ -2.03
PEX4YGR133W IES5P40060 125 aa2.39□□□□□ -2.03
PEX4YGR133W VRG4P40107 337 aa2.39□□□□□ -2.03
PEX4YGR133W YTA12P40341 825 aa2.39□□□□□ -2.03
PEX4YGR133W CAB2P40506 365 aa2.39□□□□□ -2.03
PEX4YGR133W MAM33P40513 266 aa2.39□□□□□ -2.03
PEX4YGR133W LAM5P43560 674 aa2.39□□□□□ -2.03
PEX4YGR133W IMD3P50095 523 aaKnown RBP2.39□□□□□ -2.03
PEX4YGR133W YML6P51998 286 aa2.39□□□□□ -2.03
PEX4YGR133W YGL108CP53139 140 aa2.39□□□□□ -2.03
PEX4YGR133W YGR111WP53265 400 aa2.39□□□□□ -2.03
PEX4YGR133W DCP2P53550 970 aaKnown RBP2.39□□□□□ -2.03
PEX4YGR133W ESF2P53743 316 aaKnown RBP2.39□□□□□ -2.03
PEX4YGR133W PGA2P53903 129 aa2.39□□□□□ -2.03
PEX4YGR133W TIM11P81449 96 aaPredicted RBP2.39□□□□□ -2.03
PEX4YGR133W CIK1Q01649 594 aa2.39□□□□□ -2.03
PEX4YGR133W SRL4Q03085 281 aa2.39□□□□□ -2.03
PEX4YGR133W YMR111CQ04461 462 aaPredicted RBP2.39□□□□□ -2.03
PEX4YGR133W MGR3Q04472 501 aa2.39□□□□□ -2.03
PEX4YGR133W AIM33Q04516 312 aa2.39□□□□□ -2.03
PEX4YGR133W MFB1Q04922 465 aa2.39□□□□□ -2.03
PEX4YGR133W HEL2Q05580 639 aaKnown RBP2.39□□□□□ -2.03
PEX4YGR133W YDR278CQ05612 105 aa2.39□□□□□ -2.03
PEX4YGR133W TSR2Q06672 205 aaKnown RBP2.39□□□□□ -2.03
PEX4YGR133W SMC5Q08204 1093 aa2.39□□□□□ -2.03
PEX4YGR133W YLR053CQ12026 108 aa2.39□□□□□ -2.03
PEX4YGR133W HSP42Q12329 375 aa2.39□□□□□ -2.03
PEX4YGR133W SPE4Q12455 300 aa2.39□□□□□ -2.03
PEX4YGR133W GCN1P33892 2672 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W SSC1P0CS90 654 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W PET122P10355 254 aa2.38□□□□□ -2.03
PEX4YGR133W SNF3P10870 884 aa2.38□□□□□ -2.03
PEX4YGR133W SFL1P20134 766 aa2.38□□□□□ -2.03
PEX4YGR133W RRT12P25381 491 aa2.38□□□□□ -2.03
PEX4YGR133W BUD23P25627 275 aaPredicted RBP2.38□□□□□ -2.03
PEX4YGR133W MGT1P26188 188 aa2.38□□□□□ -2.03
PEX4YGR133W RPS5P26783 225 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W RAD14P28519 371 aa2.38□□□□□ -2.03
PEX4YGR133W PRE4P30657 266 aa2.38□□□□□ -2.03
PEX4YGR133W SFP1P32432 683 aa2.38□□□□□ -2.03
PEX4YGR133W RPT5P33297 434 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W PTH2P34222 208 aa2.38□□□□□ -2.03
PEX4YGR133W UTP11P34247 250 aaPredicted RBP2.38□□□□□ -2.03
PEX4YGR133W DUG2P38149 878 aa2.38□□□□□ -2.03
PEX4YGR133W CDS1P38221 457 aa2.38□□□□□ -2.03
PEX4YGR133W SLM4P38247 162 aa2.38□□□□□ -2.03
PEX4YGR133W TSC10P38342 320 aa2.38□□□□□ -2.03
PEX4YGR133W DIA4P38705 446 aaPredicted RBP2.38□□□□□ -2.03
PEX4YGR133W SMF2P38778 549 aa2.38□□□□□ -2.03
PEX4YGR133W VPS45P38932 577 aa2.38□□□□□ -2.03
PEX4YGR133W NPT1P39683 429 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W STL1P39932 569 aa2.38□□□□□ -2.03
PEX4YGR133W PFK26P40433 827 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W SYG1P40528 902 aa2.38□□□□□ -2.03
PEX4YGR133W SAD1P43589 448 aa2.38□□□□□ -2.03
PEX4YGR133W YJR120WP47157 116 aa2.38□□□□□ -2.03
PEX4YGR133W PMT3P47190 753 aa2.38□□□□□ -2.03
PEX4YGR133W LSG1P53145 640 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W LSB1P53281 241 aa2.38□□□□□ -2.03
PEX4YGR133W BIO4P53630 237 aa2.38□□□□□ -2.03
PEX4YGR133W TIM8P57744 87 aa2.38□□□□□ -2.03
PEX4YGR133W MUB1Q03162 620 aa2.38□□□□□ -2.03
PEX4YGR133W UGO1Q03327 502 aa2.38□□□□□ -2.03
PEX4YGR133W SKY1Q03656 742 aa2.38□□□□□ -2.03
PEX4YGR133W PLP1Q04004 230 aa2.38□□□□□ -2.03
PEX4YGR133W FUS2Q05670 677 aa2.38□□□□□ -2.03
PEX4YGR133W YDL057WQ07379 328 aa2.38□□□□□ -2.03
PEX4YGR133W APC5Q08683 685 aa2.38□□□□□ -2.03
PEX4YGR133W SNX3Q08826 162 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W KEL3Q08979 651 aaPredicted RBP2.38□□□□□ -2.03
PEX4YGR133W YPR202WQ08993 238 aa2.38□□□□□ -2.03
PEX4YGR133W DBP10Q12389 995 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W RRD2Q12461 358 aa2.38□□□□□ -2.03
PEX4YGR133W NOT5Q12514 560 aaPredicted RBP2.38□□□□□ -2.03
PEX4YGR133W ADF1Q2V2Q1 113 aa2.38□□□□□ -2.03
PEX4YGR133W TMA7Q3E764 64 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W PNO1Q99216 274 aaKnown RBP2.38□□□□□ -2.03
PEX4YGR133W ILS1P09436 1072 aaKnown RBP2.37□□□□□ -2.03
PEX4YGR133W GCN3P14741 305 aa2.37□□□□□ -2.03
PEX4YGR133W MSS116P15424 664 aaKnown RBP2.37□□□□□ -2.03
PEX4YGR133W AEP2P22136 580 aa2.37□□□□□ -2.03
PEX4YGR133W PPZ1P26570 692 aa2.37□□□□□ -2.03
PEX4YGR133W POT1P27796 417 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
PEX4YGR133W CHS3P29465 1165 aa2.37□□□□□ -2.03
PEX4YGR133W TFC1P32367 649 aa2.37□□□□□ -2.03
PEX4YGR133W SPR1P32603 445 aa2.37□□□□□ -2.03
PEX4YGR133W MUD1P32605 298 aaKnown RBP2.37□□□□□ -2.03
PEX4YGR133W ARC19P33204 171 aaKnown RBP2.37□□□□□ -2.03
PEX4YGR133W CSE1P33307 960 aa2.37□□□□□ -2.03
PEX4YGR133W SIP2P34164 415 aaKnown RBP2.37□□□□□ -2.03
PEX4YGR133W TPO5P36029 618 aa2.37□□□□□ -2.03
PEX4YGR133W PCA1P38360 1216 aa2.37□□□□□ -2.03
PEX4YGR133W APE4P38821 490 aa2.37□□□□□ -2.03
PEX4YGR133W PEX18P38855 283 aa2.37□□□□□ -2.03
PEX4YGR133W SWD1P39706 426 aa2.37□□□□□ -2.03
PEX4YGR133W YEL025CP39991 1188 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms