RNA–Protein interactions for RNA: YGL088W

YGL088W, Transcript of Dubious open reading frame, yeast

Gene YGL088W, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL088W	YGL088W	NAS2	P40555	220 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	BNA6	P43619	295 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	YDL183C	P48569	320 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	TRM9	P49957	279 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	PAN2	P53010	1115 aa	Predicted RBP	4.13	□□□□□ -1.75
YGL088W	YGL088W	NOP15	P53927	220 aa	Predicted RBP	4.13	□□□□□ -1.75
YGL088W	YGL088W	SSL2	Q00578	843 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	YPL071C	Q02864	156 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	ADI1	Q03677	179 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	YMR160W	Q03823	816 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	MTQ2	Q03920	221 aa	Predicted RBP	4.13	□□□□□ -1.75
YGL088W	YGL088W	UFO1	Q04511	668 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	VBA4	Q04602	768 aa	Known RBP	4.13	□□□□□ -1.75
YGL088W	YGL088W	AIM32	Q04689	311 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	SPC2	Q04969	178 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	YLR345W	Q06137	509 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	TRM8	Q12009	286 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	VPS68	Q12016	184 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	VIK1	Q12045	647 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	VPS54	Q12071	889 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	RBD2	Q12270	262 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	SKS1	Q12505	502 aa		4.13	□□□□□ -1.75
YGL088W	YGL088W	SEM1	O94742	89 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	CAR2	P07991	424 aa	Known RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	PRB1	P09232	635 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	MATALPHA2	P0CY08	210 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	HMLALPHA2	P0CY09	210 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	GFA1	P14742	717 aa	Known RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	FUS3	P16892	353 aa	Known RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	ISY1	P21374	235 aa	Predicted RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	ROX1	P25042	368 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	ARE1	P25628	610 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	NGG1	P32494	702 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	ABD1	P32783	436 aa	Predicted RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	DUT1	P33317	147 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	LST4	P34239	828 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	RMA1	P36001	430 aa	Known RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	YRO2	P38079	344 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	YMC2	P38087	329 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	YEL068C	P39977	110 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	PIC2	P40035	300 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	MND2	P40577	368 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	QRI7	P43122	407 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	NIT2	P47016	307 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	AMA1	P50082	593 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	MAL11	P53048	616 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	ZIP2	P53061	704 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	YGL108C	P53139	140 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	ERP6	P53198	216 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	SNF12	P53628	566 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	TEP1	P53916	434 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	YNL040W	P53960	456 aa	Predicted RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	TIM8	P57744	87 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	MRPS17	Q03246	237 aa	Predicted RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	RTT103	Q05543	409 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	CIA1	Q05583	330 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	OMS1	Q06668	471 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	VAC14	Q06708	880 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	GET3	Q12154	354 aa	Known RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	NSI1	Q12457	570 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	NOT5	Q12514	560 aa	Predicted RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	LSO2	Q3E772	92 aa	Known RBP	4.12	□□□□□ -1.75
YGL088W	YGL088W	LAG2	Q92325	660 aa		4.12	□□□□□ -1.75
YGL088W	YGL088W	TUB1	P09733	447 aa	Known RBP	4.11	□□□□□ -1.75
YGL088W	YGL088W	TUB3	P09734	445 aa	Known RBP	4.11	□□□□□ -1.75
YGL088W	YGL088W	CKA1	P15790	372 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	CDC42	P19073	191 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	STE50	P25344	346 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	RNQ1	P25367	405 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	ERG3	P32353	365 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	SSO1	P32867	290 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	MRP8	P35719	219 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	MED8	P38304	223 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	TCD1	P38756	429 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	YHR210C	P38893	341 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	DHH1	P39517	506 aa	Known RBP	4.11	□□□□□ -1.75
YGL088W	YGL088W	SAP1	P39955	897 aa	Known RBP	4.11	□□□□□ -1.75
YGL088W	YGL088W	GIP2	P40036	548 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	YIL165C	P40446	119 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	NDC80	P40460	691 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	AGE2	P40529	298 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	MPH1	P40562	993 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	YJR039W	P47107	1121 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	PPT1	P53043	513 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	ARI1	P53111	347 aa	Known RBP	4.11	□□□□□ -1.75
YGL088W	YGL088W	SOK2	P53438	785 aa	Predicted RBP	4.11	□□□□□ -1.75
YGL088W	YGL088W	YNL143C	P53908	130 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	NUP53	Q03790	475 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	ECM18	Q04623	453 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	RAX1	Q08760	435 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	YIG1	Q08956	461 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	DIN7	Q12086	430 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	YLR049C	Q12110	428 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	SLP1	Q12232	587 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	HER1	Q12276	1246 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	PSY3	Q12318	242 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	PFK27	Q12471	397 aa	Predicted RBP	4.11	□□□□□ -1.75
YGL088W	YGL088W	SRN2	Q99176	213 aa		4.11	□□□□□ -1.75
YGL088W	YGL088W	YAP1	P19880	650 aa	Known RBP	4.1	□□□□□ -1.75
YGL088W	YGL088W	CWH43	P25618	953 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms