RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W BNA3P47039 444 aaKnown RBP5.9□□□□□ -1.46
RPN11YFR004W HSV2P50079 448 aaPredicted RBP5.9□□□□□ -1.46
RPN11YFR004W GPG1P53130 126 aa5.9□□□□□ -1.46
RPN11YFR004W YGL108CP53139 140 aa5.9□□□□□ -1.46
RPN11YFR004W NOP19P53317 196 aaPredicted RBP5.9□□□□□ -1.46
RPN11YFR004W SLM2P53955 656 aa5.9□□□□□ -1.46
RPN11YFR004W PET117Q02771 107 aa5.9□□□□□ -1.46
RPN11YFR004W RIF2Q06208 395 aa5.9□□□□□ -1.46
RPN11YFR004W CDA1Q06702 301 aa5.9□□□□□ -1.46
RPN11YFR004W SGT1Q08446 395 aa5.9□□□□□ -1.46
RPN11YFR004W YOR378WQ08902 515 aa5.9□□□□□ -1.46
RPN11YFR004W PGC1Q08959 321 aa5.9□□□□□ -1.46
RPN11YFR004W SRO7Q12038 1033 aa5.9□□□□□ -1.46
RPN11YFR004W NUS1Q12063 375 aa5.9□□□□□ -1.46
RPN11YFR004W YLR046CQ12253 270 aa5.9□□□□□ -1.46
RPN11YFR004W RKM5Q12367 367 aa5.9□□□□□ -1.46
RPN11YFR004W RMD5Q12508 421 aa5.9□□□□□ -1.46
RPN11YFR004W NHA1Q99271 985 aa5.9□□□□□ -1.46
RPN11YFR004W MEC1P38111 2368 aa5.89□□□□□ -1.47
RPN11YFR004W SEM1O94742 89 aa5.89□□□□□ -1.47
RPN11YFR004W GEX1P25596 615 aa5.89□□□□□ -1.47
RPN11YFR004W BUB2P26448 306 aaPredicted RBP5.89□□□□□ -1.47
RPN11YFR004W UGP1P32861 499 aaKnown RBP5.89□□□□□ -1.47
RPN11YFR004W PMT1P33775 817 aa5.89□□□□□ -1.47
RPN11YFR004W GEX2P36173 615 aa5.89□□□□□ -1.47
RPN11YFR004W OSH7P38755 437 aa5.89□□□□□ -1.47
RPN11YFR004W NAB3P38996 802 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
RPN11YFR004W YHB1P39676 399 aaKnown RBP5.89□□□□□ -1.47
RPN11YFR004W HAT2P39984 401 aa5.89□□□□□ -1.47
RPN11YFR004W ECM10P39987 644 aa5.89□□□□□ -1.47
RPN11YFR004W YJL070CP40361 888 aa5.89□□□□□ -1.47
RPN11YFR004W YRB1P41920 201 aaKnown RBP5.89□□□□□ -1.47
RPN11YFR004W DLD2P46681 530 aaKnown RBP5.89□□□□□ -1.47
RPN11YFR004W PPT1P53043 513 aa5.89□□□□□ -1.47
RPN11YFR004W BOL2P53082 120 aa5.89□□□□□ -1.47
RPN11YFR004W GPI1P53306 609 aa5.89□□□□□ -1.47
RPN11YFR004W YGR266WP53326 701 aa5.89□□□□□ -1.47
RPN11YFR004W PRM1P53835 661 aa5.89□□□□□ -1.47
RPN11YFR004W EFM6P53970 246 aa5.89□□□□□ -1.47
RPN11YFR004W YDR131CQ03899 556 aa5.89□□□□□ -1.47
RPN11YFR004W RSA3Q05942 220 aaKnown RBP5.89□□□□□ -1.47
RPN11YFR004W ATG17Q06410 417 aa5.89□□□□□ -1.47
RPN11YFR004W LDB18Q07887 179 aa5.89□□□□□ -1.47
RPN11YFR004W MRH1Q12117 320 aaPredicted RBP5.89□□□□□ -1.47
RPN11YFR004W NTO1Q12311 748 aa5.89□□□□□ -1.47
RPN11YFR004W PSY3Q12318 242 aa5.89□□□□□ -1.47
RPN11YFR004W HBN1Q96VH4 193 aa5.89□□□□□ -1.47
RPN11YFR004W TPK2P06245 380 aa5.88□□□□□ -1.47
RPN11YFR004W SPS1P08458 490 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-LR4P0C2I8 440 aaKnown RBP5.88□□□□□ -1.47
RPN11YFR004W TY1A-DR6P0CX70 440 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-ER1P0CX71 440 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-LR2P0CX72 440 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-PLP0CX73 440 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-JR1P0CX74 440 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-LR3P0CX75 440 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-ML2P0CX76 440 aa5.88□□□□□ -1.47
RPN11YFR004W SNF4P12904 322 aa5.88□□□□□ -1.47
RPN11YFR004W RPB4P20433 221 aaPredicted RBP5.88□□□□□ -1.47
RPN11YFR004W URE2P23202 354 aaKnown RBP5.88□□□□□ -1.47
RPN11YFR004W YCK2P23292 546 aaKnown RBP5.88□□□□□ -1.47
RPN11YFR004W PHO3P24031 467 aa5.88□□□□□ -1.47
RPN11YFR004W RBK1P25332 333 aa5.88□□□□□ -1.47
RPN11YFR004W DCC1P25559 380 aa5.88□□□□□ -1.47
RPN11YFR004W BRF1P29056 596 aa5.88□□□□□ -1.47
RPN11YFR004W ATP7P30902 174 aa5.88□□□□□ -1.47
RPN11YFR004W VPH2P32341 215 aa5.88□□□□□ -1.47
RPN11YFR004W TFA2P36145 328 aa5.88□□□□□ -1.47
RPN11YFR004W YHL041WP38730 149 aa5.88□□□□□ -1.47
RPN11YFR004W MUP3P38734 546 aa5.88□□□□□ -1.47
RPN11YFR004W SNL1P40548 159 aa5.88□□□□□ -1.47
RPN11YFR004W TES1P41903 349 aaKnown RBP5.88□□□□□ -1.47
RPN11YFR004W YJR120WP47157 116 aa5.88□□□□□ -1.47
RPN11YFR004W SAP4P53036 818 aa5.88□□□□□ -1.47
RPN11YFR004W STR3P53101 465 aaKnown RBP5.88□□□□□ -1.47
RPN11YFR004W GTR2P53290 341 aa5.88□□□□□ -1.47
RPN11YFR004W IBD2P53892 351 aa5.88□□□□□ -1.47
RPN11YFR004W YNL033WP53964 284 aa5.88□□□□□ -1.47
RPN11YFR004W YNL019CP53975 284 aa5.88□□□□□ -1.47
RPN11YFR004W ARP4P80428 489 aa5.88□□□□□ -1.47
RPN11YFR004W PIR1Q03178 341 aa5.88□□□□□ -1.47
RPN11YFR004W GOT1Q03554 138 aa5.88□□□□□ -1.47
RPN11YFR004W RPC11Q04307 110 aaPredicted RBP5.88□□□□□ -1.47
RPN11YFR004W HSP31Q04432 237 aa5.88□□□□□ -1.47
RPN11YFR004W YOL159CQ08300 171 aa5.88□□□□□ -1.47
RPN11YFR004W YOR389WQ08912 624 aa5.88□□□□□ -1.47
RPN11YFR004W YPL278CQ08990 100 aa5.88□□□□□ -1.47
RPN11YFR004W ULA1Q12059 462 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-GR1Q12085 440 aa5.88□□□□□ -1.47
RPN11YFR004W UPC2Q12151 913 aa5.88□□□□□ -1.47
RPN11YFR004W YOR342CQ12182 319 aa5.88□□□□□ -1.47
RPN11YFR004W ATG34Q12292 412 aa5.88□□□□□ -1.47
RPN11YFR004W SUL2Q12325 893 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.88□□□□□ -1.47
RPN11YFR004W MDM12Q92328 271 aa5.88□□□□□ -1.47
RPN11YFR004W TY1A-OLQ92392 440 aaKnown RBP5.88□□□□□ -1.47
RPN11YFR004W SUC2P00724 532 aa5.87□□□□□ -1.47
RPN11YFR004W ATP6P00854 259 aa5.87□□□□□ -1.47
RPN11YFR004W MSS18P08593 268 aa5.87□□□□□ -1.47
RPN11YFR004W COS2P0CX12 379 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms