RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	TDA10	P42938	290 aa		4.07	□□□□□ -1.76
NUG1	YER006W	EMC2	P47133	292 aa	Known RBP	4.07	□□□□□ -1.76
NUG1	YER006W	RPL4B	P49626	362 aa	Known RBP	4.07	□□□□□ -1.76
NUG1	YER006W	ORC5	P50874	479 aa		4.07	□□□□□ -1.76
NUG1	YER006W	SEH1	P53011	349 aa	Known RBP	4.07	□□□□□ -1.76
NUG1	YER006W	YGL036W	P53185	909 aa	Predicted RBP	4.07	□□□□□ -1.76
NUG1	YER006W	GET1	P53192	235 aa		4.07	□□□□□ -1.76
NUG1	YER006W	RPT6	Q01939	405 aa	Known RBP	4.07	□□□□□ -1.76
NUG1	YER006W	ARL3	Q02804	198 aa		4.07	□□□□□ -1.76
NUG1	YER006W	RSN1	Q03516	953 aa		4.07	□□□□□ -1.76
NUG1	YER006W	YDR249C	Q03787	373 aa		4.07	□□□□□ -1.76
NUG1	YER006W	SSL1	Q04673	461 aa	Predicted RBP	4.07	□□□□□ -1.76
NUG1	YER006W	SOV1	Q04748	898 aa		4.07	□□□□□ -1.76
NUG1	YER006W	BUR2	Q05949	395 aa		4.07	□□□□□ -1.76
NUG1	YER006W	YPR196W	Q06595	470 aa		4.07	□□□□□ -1.76
NUG1	YER006W	YOR214C	Q12282	236 aa		4.07	□□□□□ -1.76
NUG1	YER006W	FMP16	Q12497	93 aa		4.07	□□□□□ -1.76
NUG1	YER006W	RMP1	Q12530	201 aa		4.07	□□□□□ -1.76
NUG1	YER006W	YDR034W-B	Q6Q5X2	51 aa		4.07	□□□□□ -1.76
NUG1	YER006W	YBR298C-A	Q8TGK4	73 aa		4.07	□□□□□ -1.76
NUG1	YER006W	VCX1	Q99385	411 aa		4.07	□□□□□ -1.76
NUG1	YER006W	AI5_BETA	Q9ZZX0	354 aa		4.07	□□□□□ -1.76
NUG1	YER006W	RAD7	P06779	565 aa		4.06	□□□□□ -1.76
NUG1	YER006W	HMG2	P12684	1045 aa		4.06	□□□□□ -1.76
NUG1	YER006W	MRP13	P12686	339 aa		4.06	□□□□□ -1.76
NUG1	YER006W	CDC42	P19073	191 aa		4.06	□□□□□ -1.76
NUG1	YER006W	KGD1	P20967	1014 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	CTR86	P25355	563 aa		4.06	□□□□□ -1.76
NUG1	YER006W	YCR015C	P25616	317 aa		4.06	□□□□□ -1.76
NUG1	YER006W	CPR3	P25719	182 aa		4.06	□□□□□ -1.76
NUG1	YER006W	CIN8	P27895	1000 aa		4.06	□□□□□ -1.76
NUG1	YER006W	PTP2	P29461	750 aa		4.06	□□□□□ -1.76
NUG1	YER006W	ACH1	P32316	526 aa		4.06	□□□□□ -1.76
NUG1	YER006W	GSH1	P32477	678 aa		4.06	□□□□□ -1.76
NUG1	YER006W	SAC6	P32599	642 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	RAD24	P32641	659 aa		4.06	□□□□□ -1.76
NUG1	YER006W	RPC25	P35718	212 aa		4.06	□□□□□ -1.76
NUG1	YER006W	MCD4	P36051	919 aa		4.06	□□□□□ -1.76
NUG1	YER006W	YKL069W	P36088	180 aa		4.06	□□□□□ -1.76
NUG1	YER006W	QNS1	P38795	714 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	LYS9	P38999	446 aa		4.06	□□□□□ -1.76
NUG1	YER006W	RGI1	P40043	161 aa	Predicted RBP	4.06	□□□□□ -1.76
NUG1	YER006W	PIG2	P40187	538 aa		4.06	□□□□□ -1.76
NUG1	YER006W	ATM1	P40416	690 aa		4.06	□□□□□ -1.76
NUG1	YER006W	VHR1	P40522	640 aa		4.06	□□□□□ -1.76
NUG1	YER006W	GTS1	P40956	396 aa		4.06	□□□□□ -1.76
NUG1	YER006W	MRPS18	P42847	217 aa		4.06	□□□□□ -1.76
NUG1	YER006W	ASK10	P48361	1146 aa		4.06	□□□□□ -1.76
NUG1	YER006W	BPL1	P48445	690 aa	Predicted RBP	4.06	□□□□□ -1.76
NUG1	YER006W	MSE1	P48525	536 aa		4.06	□□□□□ -1.76
NUG1	YER006W	COG1	P53079	417 aa		4.06	□□□□□ -1.76
NUG1	YER006W	NSA1	P53136	463 aa	Predicted RBP	4.06	□□□□□ -1.76
NUG1	YER006W	YGR012W	P53206	393 aa		4.06	□□□□□ -1.76
NUG1	YER006W	SLX9	P53251	210 aa	Predicted RBP	4.06	□□□□□ -1.76
NUG1	YER006W	VOA1	P53262	265 aa		4.06	□□□□□ -1.76
NUG1	YER006W	SNF12	P53628	566 aa		4.06	□□□□□ -1.76
NUG1	YER006W	CBK1	P53894	756 aa		4.06	□□□□□ -1.76
NUG1	YER006W	ALD6	P54115	500 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	SKI8	Q02793	397 aa	Predicted RBP	4.06	□□□□□ -1.76
NUG1	YER006W	TPP1	Q03796	238 aa		4.06	□□□□□ -1.76
NUG1	YER006W	COS7	Q07788	383 aa		4.06	□□□□□ -1.76
NUG1	YER006W	ESA1	Q08649	445 aa		4.06	□□□□□ -1.76
NUG1	YER006W	RPN6	Q12377	434 aa		4.06	□□□□□ -1.76
NUG1	YER006W	PAA1	Q12447	191 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	YHR213W-A	Q8TGT4	77 aa		4.06	□□□□□ -1.76
NUG1	YER006W	MET17	P06106	444 aa		4.06	□□□□□ -1.76
NUG1	YER006W	CAR2	P07991	424 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	FBA1	P14540	359 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	FRS1	P15624	595 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	SPO16	P17122	198 aa		4.06	□□□□□ -1.76
NUG1	YER006W	ECM25	P32525	599 aa		4.06	□□□□□ -1.76
NUG1	YER006W	RPD3	P32561	433 aa		4.06	□□□□□ -1.76
NUG1	YER006W	SUI1	P32911	108 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	SER1	P33330	395 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	CLG1	P35190	452 aa		4.06	□□□□□ -1.76
NUG1	YER006W	SKG1	P36169	355 aa		4.06	□□□□□ -1.76
NUG1	YER006W	MAL32	P38158	584 aa		4.06	□□□□□ -1.76
NUG1	YER006W	FHL1	P39521	936 aa		4.06	□□□□□ -1.76
NUG1	YER006W	SOP4	P39543	234 aa	Predicted RBP	4.06	□□□□□ -1.76
NUG1	YER006W	YAR028W	P39548	234 aa		4.06	□□□□□ -1.76
NUG1	YER006W	STL1	P39932	569 aa		4.06	□□□□□ -1.76
NUG1	YER006W	SCC4	P40090	624 aa		4.06	□□□□□ -1.76
NUG1	YER006W	DIM1	P41819	318 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	YJR107W	P47145	328 aa		4.06	□□□□□ -1.76
NUG1	YER006W	PUS4	P48567	403 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	DIE2	P50076	525 aa		4.06	□□□□□ -1.76
NUG1	YER006W	ART5	P53244	586 aa	Known RBP	4.06	□□□□□ -1.76
NUG1	YER006W	GTF1	P53260	183 aa	Predicted RBP	4.06	□□□□□ -1.76
NUG1	YER006W	MAL12	P53341	584 aa		4.06	□□□□□ -1.76
NUG1	YER006W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
NUG1	YER006W	YPL107W	Q02873	248 aa		4.06	□□□□□ -1.76
NUG1	YER006W	YML131W	Q03102	365 aa		4.06	□□□□□ -1.76
NUG1	YER006W	NHX1	Q04121	633 aa		4.06	□□□□□ -1.76
NUG1	YER006W	PLM2	Q04383	521 aa		4.06	□□□□□ -1.76
NUG1	YER006W	TAF9	Q05027	157 aa		4.06	□□□□□ -1.76
NUG1	YER006W	PEX10	Q05568	337 aa		4.06	□□□□□ -1.76
NUG1	YER006W	BOP2	Q06150	570 aa		4.06	□□□□□ -1.76
NUG1	YER006W	TFC6	Q06339	672 aa		4.06	□□□□□ -1.76
NUG1	YER006W	GPN3	Q06543	272 aa		4.06	□□□□□ -1.76
NUG1	YER006W	THI73	Q07904	523 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms