RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C UTP9P38882 575 aaKnown RBP5.58□□□□□ -1.52
SEC20YDR498C YHR218WP38899 603 aa5.58□□□□□ -1.52
SEC20YDR498C DSS1P39112 969 aa5.58□□□□□ -1.52
SEC20YDR498C RIO2P40160 425 aaKnown RBP5.58□□□□□ -1.52
SEC20YDR498C VHR1P40522 640 aa5.58□□□□□ -1.52
SEC20YDR498C FLC3P53121 802 aa5.58□□□□□ -1.52
SEC20YDR498C COG7P53195 279 aa5.58□□□□□ -1.52
SEC20YDR498C SWC4P53201 476 aa5.58□□□□□ -1.52
SEC20YDR498C GPI1P53306 609 aa5.58□□□□□ -1.52
SEC20YDR498C ROT1Q03691 256 aa5.58□□□□□ -1.52
SEC20YDR498C RAD33Q04231 177 aa5.58□□□□□ -1.52
SEC20YDR498C YOL131WQ08270 108 aa5.58□□□□□ -1.52
SEC20YDR498C CLP1Q08685 445 aaPredicted RBP5.58□□□□□ -1.52
SEC20YDR498C UAF30Q08747 228 aa5.58□□□□□ -1.52
SEC20YDR498C MUM3Q08750 479 aa5.58□□□□□ -1.52
SEC20YDR498C FLC1Q08967 793 aa5.58□□□□□ -1.52
SEC20YDR498C RUP1Q12242 671 aa5.58□□□□□ -1.52
SEC20YDR498C RHO1P06780 209 aaKnown RBP5.57□□□□□ -1.52
SEC20YDR498C STE3P06783 470 aa5.57□□□□□ -1.52
SEC20YDR498C SWI5P08153 709 aa5.57□□□□□ -1.52
SEC20YDR498C MSS18P08593 268 aa5.57□□□□□ -1.52
SEC20YDR498C MRP13P12686 339 aa5.57□□□□□ -1.52
SEC20YDR498C FPR1P20081 114 aaKnown RBP5.57□□□□□ -1.52
SEC20YDR498C PHO87P25360 923 aa5.57□□□□□ -1.52
SEC20YDR498C SPB1P25582 841 aaPredicted RBP5.57□□□□□ -1.52
SEC20YDR498C CRM1P30822 1084 aaKnown RBP5.57□□□□□ -1.52
SEC20YDR498C ATP11P32453 318 aa5.57□□□□□ -1.52
SEC20YDR498C CBF5P33322 483 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SEC20YDR498C GIP1P38229 639 aa5.57□□□□□ -1.52
SEC20YDR498C ATG7P38862 630 aa5.57□□□□□ -1.52
SEC20YDR498C SSN3P39073 555 aa5.57□□□□□ -1.52
SEC20YDR498C FAA2P39518 744 aa5.57□□□□□ -1.52
SEC20YDR498C SWD1P39706 426 aa5.57□□□□□ -1.52
SEC20YDR498C MTW1P39731 289 aa5.57□□□□□ -1.52
SEC20YDR498C YEL073CP39974 107 aa5.57□□□□□ -1.52
SEC20YDR498C MEP1P40260 492 aa5.57□□□□□ -1.52
SEC20YDR498C AYR1P40471 297 aa5.57□□□□□ -1.52
SEC20YDR498C SNL1P40548 159 aa5.57□□□□□ -1.52
SEC20YDR498C NBP35P52920 328 aa5.57□□□□□ -1.52
SEC20YDR498C DCP2P53550 970 aaKnown RBP5.57□□□□□ -1.52
SEC20YDR498C YNR065CP53751 1116 aa5.57□□□□□ -1.52
SEC20YDR498C CAF120P53836 1060 aa5.57□□□□□ -1.52
SEC20YDR498C GIP3Q03016 1276 aa5.57□□□□□ -1.52
SEC20YDR498C ECM11Q04110 302 aa5.57□□□□□ -1.52
SEC20YDR498C TY1A-BLQ12266 440 aa5.57□□□□□ -1.52
SEC20YDR498C YOR012WQ12351 137 aa5.57□□□□□ -1.52
SEC20YDR498C TSC13Q99190 310 aa5.57□□□□□ -1.52
SEC20YDR498C RPS14AP06367 137 aaKnown RBP5.56□□□□□ -1.52
SEC20YDR498C ATR1P13090 542 aa5.56□□□□□ -1.52
SEC20YDR498C MSS116P15424 664 aaKnown RBP5.56□□□□□ -1.52
SEC20YDR498C DAP2P18962 818 aa5.56□□□□□ -1.52
SEC20YDR498C EPT1P22140 391 aa5.56□□□□□ -1.52
SEC20YDR498C RVS161P25343 265 aaKnown RBP5.56□□□□□ -1.52
SEC20YDR498C PTP2P29461 750 aa5.56□□□□□ -1.52
SEC20YDR498C ATP7P30902 174 aa5.56□□□□□ -1.52
SEC20YDR498C GMH1P36125 273 aa5.56□□□□□ -1.52
SEC20YDR498C LRP1P38801 184 aaKnown RBP5.56□□□□□ -1.52
SEC20YDR498C RPS14BP39516 138 aaKnown RBP5.56□□□□□ -1.52
SEC20YDR498C VRG4P40107 337 aa5.56□□□□□ -1.52
SEC20YDR498C GCV1P48015 400 aa5.56□□□□□ -1.52
SEC20YDR498C YGR015CP53208 328 aa5.56□□□□□ -1.52
SEC20YDR498C YMR099CQ03161 297 aaKnown RBP5.56□□□□□ -1.52
SEC20YDR498C YMR178WQ03219 274 aaKnown RBP5.56□□□□□ -1.52
SEC20YDR498C PPN1Q04119 674 aa5.56□□□□□ -1.52
SEC20YDR498C BCH1Q05029 724 aa5.56□□□□□ -1.52
SEC20YDR498C GMC2Q06201 188 aa5.56□□□□□ -1.52
SEC20YDR498C VTA1Q06263 330 aa5.56□□□□□ -1.52
SEC20YDR498C GET4Q12125 312 aa5.56□□□□□ -1.52
SEC20YDR498C PSY3Q12318 242 aa5.56□□□□□ -1.52
SEC20YDR498C BCY1P07278 416 aaKnown RBP5.55□□□□□ -1.52
SEC20YDR498C KAR1P11927 433 aa5.55□□□□□ -1.52
SEC20YDR498C URE2P23202 354 aaKnown RBP5.55□□□□□ -1.52
SEC20YDR498C SGV1P23293 657 aaKnown RBP5.55□□□□□ -1.52
SEC20YDR498C HXT4P32467 576 aa5.55□□□□□ -1.52
SEC20YDR498C ATO2P32907 282 aa5.55□□□□□ -1.52
SEC20YDR498C YBR241CP38142 488 aa5.55□□□□□ -1.52
SEC20YDR498C HXT6P39003 570 aaKnown RBP5.55□□□□□ -1.52
SEC20YDR498C HXT7P39004 570 aa5.55□□□□□ -1.52
SEC20YDR498C RGI1P40043 161 aaPredicted RBP5.55□□□□□ -1.52
SEC20YDR498C AZF1P41696 914 aa5.55□□□□□ -1.52
SEC20YDR498C PFA3P42836 336 aa5.55□□□□□ -1.52
SEC20YDR498C AGP3P43548 558 aa5.55□□□□□ -1.52
SEC20YDR498C GUS1P46655 708 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
SEC20YDR498C PMT4P46971 762 aa5.55□□□□□ -1.52
SEC20YDR498C GTO1P48239 356 aa5.55□□□□□ -1.52
SEC20YDR498C MTR3P48240 250 aaPredicted RBP5.55□□□□□ -1.52
SEC20YDR498C ACS2P52910 683 aaKnown RBP5.55□□□□□ -1.52
SEC20YDR498C AQR1P53943 586 aa5.55□□□□□ -1.52
SEC20YDR498C CTK1Q03957 528 aaKnown RBP5.55□□□□□ -1.52
SEC20YDR498C SMP3Q04174 516 aa5.55□□□□□ -1.52
SEC20YDR498C YKU80Q04437 629 aa5.55□□□□□ -1.52
SEC20YDR498C GPI11Q06636 219 aa5.55□□□□□ -1.52
SEC20YDR498C ATG10Q07879 167 aa5.55□□□□□ -1.52
SEC20YDR498C ULA1Q12059 462 aa5.55□□□□□ -1.52
SEC20YDR498C GTT2Q12390 233 aa5.55□□□□□ -1.52
SEC20YDR498C SNF8Q12483 233 aa5.55□□□□□ -1.52
SEC20YDR498C NKP1Q12493 238 aa5.55□□□□□ -1.52
SEC20YDR498C YCL012CQ8J0M4 134 aa5.55□□□□□ -1.52
SEC20YDR498C POL2P21951 2222 aaKnown RBP5.54□□□□□ -1.52
SEC20YDR498C TOP3P13099 656 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms