RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM28	YDR494W	LSP1	Q12230	341 aa	Known RBP	3.11	□□□□□ -1.91
RSM28	YDR494W	RAV1	P47104	1357 aa		3.11	□□□□□ -1.91
RSM28	YDR494W	SUC2	P00724	532 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	AMD1	P15274	810 aa	Known RBP	3.1	□□□□□ -1.91
RSM28	YDR494W	EXO70	P19658	623 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	LDB16	P25587	256 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	RPN12	P32496	274 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	MRE11	P32829	692 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	MBB1	P39534	108 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	RPH1	P39956	796 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	YJL132W	P47014	750 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	GPI1	P53306	609 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	BNA5	Q05979	453 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	SET6	Q12529	373 aa		3.1	□□□□□ -1.91
RSM28	YDR494W	BRR1	Q99177	341 aa	Predicted RBP	3.1	□□□□□ -1.91
RSM28	YDR494W	MCK1	P21965	375 aa	Known RBP	3.09	□□□□□ -1.91
RSM28	YDR494W	SPC110	P32380	944 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	MUM2	P38236	366 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	NDE1	P40215	560 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	RPR2	P40571	144 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	TWF1	P53250	332 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	IRC15	Q02733	499 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	PDS5	Q04264	1277 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	COG4	Q06096	861 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	VPS74	Q06385	345 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	TSR2	Q06672	205 aa	Known RBP	3.09	□□□□□ -1.91
RSM28	YDR494W	RIM20	Q12033	661 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	SEC39	Q12745	709 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	YDL007C-A	Q2V2Q0	85 aa		3.09	□□□□□ -1.91
RSM28	YDR494W	YML133C	Q03099	1374 aa		3.09	□□□□□ -1.92
RSM28	YDR494W	YLL067C	Q07888	1374 aa		3.09	□□□□□ -1.92
RSM28	YDR494W	YLL066C	Q99208	1374 aa		3.09	□□□□□ -1.92
RSM28	YDR494W	MES1	P00958	751 aa	Known RBP	3.08	□□□□□ -1.92
RSM28	YDR494W	RPL31B	P0C2H9	113 aa	Known RBP	3.08	□□□□□ -1.92
RSM28	YDR494W	RPL20A	P0CX23	172 aa	Known RBP	3.08	□□□□□ -1.92
RSM28	YDR494W	RPL20B	P0CX24	172 aa	Predicted RBP	3.08	□□□□□ -1.92
RSM28	YDR494W	VID24	P38263	362 aa		3.08	□□□□□ -1.92
RSM28	YDR494W	MTC4	P38335	694 aa	Known RBP	3.08	□□□□□ -1.92
RSM28	YDR494W	PCA1	P38360	1216 aa		3.08	□□□□□ -1.92
RSM28	YDR494W	ERP2	P39704	215 aa		3.08	□□□□□ -1.92
RSM28	YDR494W	SHO1	P40073	367 aa		3.08	□□□□□ -1.92
RSM28	YDR494W	ELP2	P42935	788 aa		3.08	□□□□□ -1.92
RSM28	YDR494W	VPS72	Q03388	795 aa		3.08	□□□□□ -1.92
RSM28	YDR494W	RBS1	Q05672	457 aa	Known RBP	3.08	□□□□□ -1.92
RSM28	YDR494W	MRD1	Q06106	887 aa	Known RBP	3.08	□□□□□ -1.92
RSM28	YDR494W	ATG29	Q12092	213 aa		3.08	□□□□□ -1.92
RSM28	YDR494W	CFT2	Q12102	859 aa	Predicted RBP	3.08	□□□□□ -1.92
RSM28	YDR494W	AYT1	Q12226	474 aa		3.08	□□□□□ -1.92
RSM28	YDR494W	GLK1	P17709	500 aa	Known RBP	3.07	□□□□□ -1.92
RSM28	YDR494W	GPI10	P30777	616 aa		3.07	□□□□□ -1.92
RSM28	YDR494W	PMT1	P33775	817 aa		3.07	□□□□□ -1.92
RSM28	YDR494W	CMC1	P36064	111 aa		3.07	□□□□□ -1.92
RSM28	YDR494W	TIF5	P38431	405 aa	Known RBP	3.07	□□□□□ -1.92
RSM28	YDR494W	UTP9	P38882	575 aa	Known RBP	3.07	□□□□□ -1.92
RSM28	YDR494W	ALG8	P40351	577 aa		3.07	□□□□□ -1.92
RSM28	YDR494W	ESL1	P40456	1118 aa		3.07	□□□□□ -1.92
RSM28	YDR494W	MET18	P40469	1032 aa		3.07	□□□□□ -1.92
RSM28	YDR494W	POP1	P41812	875 aa		3.07	□□□□□ -1.92
RSM28	YDR494W	MRPL19	P53875	158 aa		3.07	□□□□□ -1.92
RSM28	YDR494W	INH1	P01097	85 aa		3.06	□□□□□ -1.92
RSM28	YDR494W	MET17	P06106	444 aa		3.06	□□□□□ -1.92
RSM28	YDR494W	YCR022C	P25620	114 aa		3.06	□□□□□ -1.92
RSM28	YDR494W	PMU1	P36069	295 aa		3.06	□□□□□ -1.92
RSM28	YDR494W	IRC6	P43615	237 aa		3.06	□□□□□ -1.92
RSM28	YDR494W	OCA1	P50946	238 aa	Predicted RBP	3.06	□□□□□ -1.92
RSM28	YDR494W	YGL242C	P53066	181 aa		3.06	□□□□□ -1.92
RSM28	YDR494W	HEM2	P05373	342 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	ATR1	P13090	542 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	CKA1	P15790	372 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	ATP11	P32453	318 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	RSM22	P36056	628 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	TUL1	P36096	758 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	YBP1	P38315	674 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	HXT14	P42833	540 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	GWT1	P47026	490 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	URB2	P47108	1174 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	JJJ1	P53863	590 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	BSC6	Q08280	497 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	RTP1	Q12751	981 aa		3.05	□□□□□ -1.92
RSM28	YDR494W	FUN19	P28003	413 aa	Predicted RBP	3.04	□□□□□ -1.92
RSM28	YDR494W	MFT1	P33441	392 aa	Known RBP	3.04	□□□□□ -1.92
RSM28	YDR494W	CBP4	P37267	147 aa		3.04	□□□□□ -1.92
RSM28	YDR494W	KEL1	P38853	1164 aa	Known RBP	3.04	□□□□□ -1.92
RSM28	YDR494W	HAT2	P39984	401 aa		3.04	□□□□□ -1.92
RSM28	YDR494W	YGL108C	P53139	140 aa		3.04	□□□□□ -1.92
RSM28	YDR494W	SLG1	P54867	378 aa		3.04	□□□□□ -1.92
RSM28	YDR494W	MDM1	Q01846	1127 aa		3.04	□□□□□ -1.92
RSM28	YDR494W	KEL3	Q08979	651 aa	Predicted RBP	3.04	□□□□□ -1.92
RSM28	YDR494W	RKM5	Q12367	367 aa		3.04	□□□□□ -1.92
RSM28	YDR494W	LEU4	P06208	619 aa	Known RBP	3.03	□□□□□ -1.92
RSM28	YDR494W	ROX1	P25042	368 aa		3.03	□□□□□ -1.92
RSM28	YDR494W	BUB3	P26449	341 aa		3.03	□□□□□ -1.92
RSM28	YDR494W	RAD14	P28519	371 aa		3.03	□□□□□ -1.92
RSM28	YDR494W	AFG1	P32317	509 aa		3.03	□□□□□ -1.92
RSM28	YDR494W	SEC66	P33754	206 aa		3.03	□□□□□ -1.92
RSM28	YDR494W	FRE2	P36033	711 aa		3.03	□□□□□ -1.92
RSM28	YDR494W	OTU2	P38747	307 aa	Known RBP	3.03	□□□□□ -1.92
RSM28	YDR494W	SMF1	P38925	575 aa		3.03	□□□□□ -1.92
RSM28	YDR494W	FAU1	P40099	211 aa		3.03	□□□□□ -1.92
RSM28	YDR494W	SYG1	P40528	902 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms