RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	CAR1	P00812	333 aa	Known RBP	4.8	□□□□□ -1.64
LSM6	YDR378C	RHO2	P06781	192 aa		4.8	□□□□□ -1.64
LSM6	YDR378C	CDC23	P16522	626 aa		4.8	□□□□□ -1.64
LSM6	YDR378C	SPB1	P25582	841 aa	Predicted RBP	4.8	□□□□□ -1.64
LSM6	YDR378C	HCS1	P34243	683 aa		4.8	□□□□□ -1.64
LSM6	YDR378C	CBP4	P37267	147 aa		4.8	□□□□□ -1.64
LSM6	YDR378C	LSM5	P40089	93 aa	Known RBP	4.8	□□□□□ -1.64
LSM6	YDR378C	SSU1	P41930	458 aa		4.8	□□□□□ -1.64
LSM6	YDR378C	URB2	P47108	1174 aa		4.8	□□□□□ -1.64
LSM6	YDR378C	YGR149W	P48236	432 aa		4.8	□□□□□ -1.64
LSM6	YDR378C	SLG1	P54867	378 aa		4.8	□□□□□ -1.64
LSM6	YDR378C	TAP42	Q04372	366 aa		4.8	□□□□□ -1.64
LSM6	YDR378C	LSP1	Q12230	341 aa	Known RBP	4.8	□□□□□ -1.64
LSM6	YDR378C	MES1	P00958	751 aa	Known RBP	4.79	□□□□□ -1.64
LSM6	YDR378C	SPS4	P09937	338 aa		4.79	□□□□□ -1.64
LSM6	YDR378C	PPH22	P23595	377 aa		4.79	□□□□□ -1.64
LSM6	YDR378C	HXT3	P32466	567 aa	Known RBP	4.79	□□□□□ -1.64
LSM6	YDR378C	IKS1	P47042	667 aa		4.79	□□□□□ -1.64
LSM6	YDR378C	RMD9	P53140	646 aa	Known RBP	4.79	□□□□□ -1.64
LSM6	YDR378C	YMR087W	Q04299	284 aa		4.79	□□□□□ -1.64
LSM6	YDR378C	RBS1	Q05672	457 aa	Known RBP	4.79	□□□□□ -1.64
LSM6	YDR378C	SYO1	Q07395	620 aa		4.79	□□□□□ -1.64
LSM6	YDR378C	PDX1	P16451	410 aa		4.78	□□□□□ -1.64
LSM6	YDR378C	GLK1	P17709	500 aa	Known RBP	4.78	□□□□□ -1.64
LSM6	YDR378C	PPZ1	P26570	692 aa		4.78	□□□□□ -1.64
LSM6	YDR378C	IDH2	P28241	369 aa	Known RBP	4.78	□□□□□ -1.64
LSM6	YDR378C	FRE1	P32791	686 aa		4.78	□□□□□ -1.64
LSM6	YDR378C	SIP2	P34164	415 aa	Known RBP	4.78	□□□□□ -1.64
LSM6	YDR378C	VPS52	P39904	641 aa		4.78	□□□□□ -1.64
LSM6	YDR378C	RPA49	Q01080	415 aa	Predicted RBP	4.78	□□□□□ -1.64
LSM6	YDR378C	MRPL51	Q06090	140 aa	Predicted RBP	4.78	□□□□□ -1.64
LSM6	YDR378C	CFT2	Q12102	859 aa	Predicted RBP	4.78	□□□□□ -1.64
LSM6	YDR378C	YDL009C	Q12210	107 aa		4.78	□□□□□ -1.64
LSM6	YDR378C	YRF1-4	O13559	1382 aa		4.78	□□□□□ -1.64
LSM6	YDR378C	BUD14	P27637	709 aa		4.77	□□□□□ -1.65
LSM6	YDR378C	FUN19	P28003	413 aa	Predicted RBP	4.77	□□□□□ -1.65
LSM6	YDR378C	SEC1	P30619	724 aa	Known RBP	4.77	□□□□□ -1.65
LSM6	YDR378C	DBF4	P32325	704 aa		4.77	□□□□□ -1.65
LSM6	YDR378C	TUL1	P36096	758 aa		4.77	□□□□□ -1.65
LSM6	YDR378C	RTT107	P38850	1070 aa		4.77	□□□□□ -1.65
LSM6	YDR378C	YJL070C	P40361	888 aa		4.77	□□□□□ -1.65
LSM6	YDR378C	IRC15	Q02733	499 aa		4.77	□□□□□ -1.65
LSM6	YDR378C	BNA5	Q05979	453 aa		4.77	□□□□□ -1.65
LSM6	YDR378C	VPS74	Q06385	345 aa		4.77	□□□□□ -1.65
LSM6	YDR378C	YCR051W	P25631	222 aa		4.76	□□□□□ -1.65
LSM6	YDR378C	ATP11	P32453	318 aa		4.76	□□□□□ -1.65
LSM6	YDR378C	GYP6	P32806	458 aa		4.76	□□□□□ -1.65
LSM6	YDR378C	REC114	P32841	428 aa		4.76	□□□□□ -1.65
LSM6	YDR378C	PTR2	P32901	601 aa		4.76	□□□□□ -1.65
LSM6	YDR378C	FMS1	P50264	508 aa		4.76	□□□□□ -1.65
LSM6	YDR378C	YGR250C	P53316	781 aa	Known RBP	4.76	□□□□□ -1.65
LSM6	YDR378C	RLI1	Q03195	608 aa	Known RBP	4.76	□□□□□ -1.65
LSM6	YDR378C	DAP1	Q12091	152 aa		4.76	□□□□□ -1.65
LSM6	YDR378C	LEU4	P06208	619 aa	Known RBP	4.75	□□□□□ -1.65
LSM6	YDR378C	MTF1	P14908	341 aa	Known RBP	4.75	□□□□□ -1.65
LSM6	YDR378C	AMD1	P15274	810 aa	Known RBP	4.75	□□□□□ -1.65
LSM6	YDR378C	RPC53	P25441	422 aa		4.75	□□□□□ -1.65
LSM6	YDR378C	KEL1	P38853	1164 aa	Known RBP	4.75	□□□□□ -1.65
LSM6	YDR378C	YAT2	P40017	923 aa		4.75	□□□□□ -1.65
LSM6	YDR378C	SYG1	P40528	902 aa		4.75	□□□□□ -1.65
LSM6	YDR378C	ELP2	P42935	788 aa		4.75	□□□□□ -1.65
LSM6	YDR378C	GPH1	P06738	902 aa	Known RBP	4.74	□□□□□ -1.65
LSM6	YDR378C	SRV2	P17555	526 aa	Known RBP	4.74	□□□□□ -1.65
LSM6	YDR378C	ATP10	P18496	279 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	ADK2	P26364	225 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	YIM1	P28625	365 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	NDC1	P32500	655 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	RML2	P32611	393 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	GCS1	P35197	352 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	RSM22	P36056	628 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	THI2	P38141	450 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	NTC20	P38302	140 aa	Predicted RBP	4.74	□□□□□ -1.65
LSM6	YDR378C	NCS2	P53923	493 aa	Predicted RBP	4.74	□□□□□ -1.65
LSM6	YDR378C	RPM2	Q02773	1202 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	SOV1	Q04748	898 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	RRP45	Q05636	305 aa	Known RBP	4.74	□□□□□ -1.65
LSM6	YDR378C	SIL1	Q08199	421 aa		4.74	□□□□□ -1.65
LSM6	YDR378C	KEL3	Q08979	651 aa	Predicted RBP	4.74	□□□□□ -1.65
LSM6	YDR378C	YML002W	P0CF17	737 aa		4.73	□□□□□ -1.65
LSM6	YDR378C	BUB3	P26449	341 aa		4.73	□□□□□ -1.65
LSM6	YDR378C	STB6	P36085	766 aa		4.73	□□□□□ -1.65
LSM6	YDR378C	FAU1	P40099	211 aa		4.73	□□□□□ -1.65
LSM6	YDR378C	YMR147W	P40218	223 aa	Known RBP	4.73	□□□□□ -1.65
LSM6	YDR378C	VMA13	P41807	478 aa	Known RBP	4.73	□□□□□ -1.65
LSM6	YDR378C	CRZ1	P53968	678 aa		4.73	□□□□□ -1.65
LSM6	YDR378C	ARX1	Q03862	593 aa	Known RBP	4.73	□□□□□ -1.65
LSM6	YDR378C	TIP41	Q12199	356 aa		4.73	□□□□□ -1.65
LSM6	YDR378C	ISA2	Q12425	185 aa		4.73	□□□□□ -1.65
LSM6	YDR378C	CYB2	P00175	591 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	PRO3	P32263	286 aa	Known RBP	4.72	□□□□□ -1.65
LSM6	YDR378C	YME2	P32843	850 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	ARA1	P38115	344 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	VHC1	P38329	1120 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	RTT101	P47050	842 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	YGL138C	P53122	345 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	KAP120	Q02932	1032 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	YDR131C	Q03899	556 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	ROY1	Q04847	553 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
LSM6	YDR378C	NDD1	Q08887	554 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms