RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W YHL041WP38730 149 aa2.54□□□□□ -2
VPS41YDR080W ARO9P38840 513 aaPredicted RBP2.54□□□□□ -2
VPS41YDR080W STL1P39932 569 aa2.54□□□□□ -2
VPS41YDR080W ASK10P48361 1146 aa2.54□□□□□ -2
VPS41YDR080W SPC105P53148 917 aa2.54□□□□□ -2
VPS41YDR080W GIR2Q03768 265 aaPredicted RBP2.54□□□□□ -2
VPS41YDR080W INP2Q03824 705 aa2.54□□□□□ -2
VPS41YDR080W SXM1Q04175 944 aaKnown RBP2.54□□□□□ -2
VPS41YDR080W AAD4Q07747 329 aa2.54□□□□□ -2
VPS41YDR080W YLR030WQ07967 263 aa2.54□□□□□ -2
VPS41YDR080W SIL1Q08199 421 aa2.54□□□□□ -2
VPS41YDR080W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
VPS41YDR080W RGT2Q12300 763 aa2.54□□□□□ -2
VPS41YDR080W YER190C-BP0CX94 160 aa2.54□□□□□ -2
VPS41YDR080W YEL077W-AP0CX95 160 aa2.54□□□□□ -2
VPS41YDR080W YGR296C-BP0CX96 160 aa2.54□□□□□ -2
VPS41YDR080W YPL283W-BP0CX97 160 aa2.54□□□□□ -2
VPS41YDR080W YPR204C-AP0CX98 160 aa2.54□□□□□ -2
VPS41YDR080W SPT15P13393 240 aaKnown RBP2.54□□□□□ -2
VPS41YDR080W OM45P16547 393 aa2.54□□□□□ -2
VPS41YDR080W MRPL8P22353 238 aa2.54□□□□□ -2
VPS41YDR080W PET309P32522 965 aaPredicted RBP2.54□□□□□ -2
VPS41YDR080W KAR9P32526 644 aa2.54□□□□□ -2
VPS41YDR080W TFC3P34111 1160 aa2.54□□□□□ -2
VPS41YDR080W CSG2P35206 410 aa2.54□□□□□ -2
VPS41YDR080W RAD26P40352 1085 aa2.54□□□□□ -2
VPS41YDR080W MKT1P40850 830 aaKnown RBP2.54□□□□□ -2
VPS41YDR080W IMA5P40884 581 aa2.54□□□□□ -2
VPS41YDR080W TOS3P43637 560 aa2.54□□□□□ -2
VPS41YDR080W SNG1P46950 547 aa2.54□□□□□ -2
VPS41YDR080W TAN1P53072 289 aaPredicted RBP2.54□□□□□ -2
VPS41YDR080W HOP2P53187 214 aa2.54□□□□□ -2
VPS41YDR080W COG7P53195 279 aa2.54□□□□□ -2
VPS41YDR080W ESBP6P53918 673 aa2.54□□□□□ -2
VPS41YDR080W YPL068CQ02749 293 aa2.54□□□□□ -2
VPS41YDR080W YMR160WQ03823 816 aa2.54□□□□□ -2
VPS41YDR080W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
VPS41YDR080W PEX15Q08215 383 aa2.54□□□□□ -2
VPS41YDR080W TRE2Q08693 809 aa2.54□□□□□ -2
VPS41YDR080W TGS1Q12052 315 aa2.54□□□□□ -2
VPS41YDR080W TIM17P39515 158 aa2.53□□□□□ -2
VPS41YDR080W YFR018CP43599 363 aa2.53□□□□□ -2
VPS41YDR080W PHO86P46956 311 aa2.53□□□□□ -2
VPS41YDR080W YJL043WP47053 257 aa2.53□□□□□ -2
VPS41YDR080W BPL1P48445 690 aaPredicted RBP2.53□□□□□ -2
VPS41YDR080W YGL108CP53139 140 aa2.53□□□□□ -2
VPS41YDR080W NNF2P53253 936 aa2.53□□□□□ -2
VPS41YDR080W DRN1P53255 507 aaKnown RBP2.53□□□□□ -2
VPS41YDR080W YMR178WQ03219 274 aaKnown RBP2.53□□□□□ -2
VPS41YDR080W YPR114WQ06107 315 aa2.53□□□□□ -2
VPS41YDR080W RAD34Q06665 692 aa2.53□□□□□ -2
VPS41YDR080W YPL272CQ08984 517 aa2.53□□□□□ -2
VPS41YDR080W VPS68Q12016 184 aa2.53□□□□□ -2
VPS41YDR080W TMS1Q12116 473 aa2.53□□□□□ -2
VPS41YDR080W IRA2P19158 3079 aa2.53□□□□□ -2
VPS41YDR080W RRP43P25359 394 aaPredicted RBP2.53□□□□□ -2
VPS41YDR080W SRP72P38688 640 aaKnown RBP2.53□□□□□ -2
VPS41YDR080W CIR1P42940 261 aa2.53□□□□□ -2
VPS41YDR080W GLO1P50107 326 aa2.53□□□□□ -2
VPS41YDR080W TRM112P53738 135 aaPredicted RBP2.53□□□□□ -2
VPS41YDR080W YNL143CP53908 130 aa2.53□□□□□ -2
VPS41YDR080W RHO3Q00245 231 aaKnown RBP2.53□□□□□ -2
VPS41YDR080W CCE1Q03702 353 aa2.53□□□□□ -2
VPS41YDR080W VHS1Q03785 461 aa2.53□□□□□ -2
VPS41YDR080W PLB3Q08108 686 aa2.53□□□□□ -2
VPS41YDR080W PEX11Q12462 236 aa2.53□□□□□ -2
VPS41YDR080W IRA1P18963 3092 aa2.53□□□□□ -2
VPS41YDR080W ADH4P10127 382 aa2.52□□□□□ -2.01
VPS41YDR080W SST2P11972 698 aaKnown RBP2.52□□□□□ -2.01
VPS41YDR080W AAT2P23542 418 aaKnown RBP2.52□□□□□ -2.01
VPS41YDR080W TSR4P25040 408 aa2.52□□□□□ -2.01
VPS41YDR080W TAE1P38340 232 aa2.52□□□□□ -2.01
VPS41YDR080W FSH1P38777 243 aaKnown RBP2.52□□□□□ -2.01
VPS41YDR080W EDC3P39998 551 aaKnown RBP2.52□□□□□ -2.01
VPS41YDR080W SLD3P53135 668 aa2.52□□□□□ -2.01
VPS41YDR080W VAC7P53950 1165 aa2.52□□□□□ -2.01
VPS41YDR080W RPC11Q04307 110 aaPredicted RBP2.52□□□□□ -2.01
VPS41YDR080W PPH21P23594 369 aa2.52□□□□□ -2.01
VPS41YDR080W CBF2P32504 956 aa2.52□□□□□ -2.01
VPS41YDR080W SRB2P34162 210 aa2.52□□□□□ -2.01
VPS41YDR080W PRX1P34227 261 aaKnown RBP2.52□□□□□ -2.01
VPS41YDR080W ARA1P38115 344 aa2.52□□□□□ -2.01
VPS41YDR080W YJL132WP47014 750 aa2.52□□□□□ -2.01
VPS41YDR080W SWC4P53201 476 aa2.52□□□□□ -2.01
VPS41YDR080W ACS1Q01574 713 aa2.52□□□□□ -2.01
VPS41YDR080W ENT2Q05785 613 aa2.52□□□□□ -2.01
VPS41YDR080W YDL242WQ07746 117 aa2.52□□□□□ -2.01
VPS41YDR080W THI20Q08224 551 aa2.52□□□□□ -2.01
VPS41YDR080W YOR097CQ12274 175 aaPredicted RBP2.52□□□□□ -2.01
VPS41YDR080W PNO1Q99216 274 aaKnown RBP2.52□□□□□ -2.01
VPS41YDR080W IML3P38265 245 aa2.52□□□□□ -2.01
VPS41YDR080W RPT2P40327 437 aaKnown RBP2.52□□□□□ -2.01
VPS41YDR080W DLD2P46681 530 aaKnown RBP2.52□□□□□ -2.01
VPS41YDR080W SIP4P46954 829 aa2.52□□□□□ -2.01
VPS41YDR080W YNL144CP53907 740 aa2.52□□□□□ -2.01
VPS41YDR080W STP3Q05937 343 aa2.52□□□□□ -2.01
VPS41YDR080W HOM3P10869 527 aa2.51□□□□□ -2.01
VPS41YDR080W YCR061WP25639 631 aa2.51□□□□□ -2.01
VPS41YDR080W MRPL9P31334 269 aa2.51□□□□□ -2.01
VPS41YDR080W SPR1P32603 445 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms