RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W YMR160WQ03823 816 aa2.21□□□□□ -2.06
CDC50YCR094W SOV1Q04748 898 aa2.21□□□□□ -2.06
CDC50YCR094W HCR1Q05775 265 aaKnown RBP2.21□□□□□ -2.06
CDC50YCR094W LEU9Q12166 604 aaKnown RBP2.21□□□□□ -2.06
CDC50YCR094W PDH1Q12428 516 aaKnown RBP2.21□□□□□ -2.06
CDC50YCR094W YDL007C-AQ2V2Q0 85 aa2.21□□□□□ -2.06
CDC50YCR094W RPL15AP05748 204 aaKnown RBP2.2□□□□□ -2.06
CDC50YCR094W MDH1P17505 334 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CDC50YCR094W ART10P18634 518 aaKnown RBP2.2□□□□□ -2.06
CDC50YCR094W TKL1P23254 680 aaKnown RBP2.2□□□□□ -2.06
CDC50YCR094W CPR2P23285 205 aa2.2□□□□□ -2.06
CDC50YCR094W BUD5P25300 642 aaPredicted RBP2.2□□□□□ -2.06
CDC50YCR094W IDH2P28241 369 aaKnown RBP2.2□□□□□ -2.06
CDC50YCR094W PUP2P32379 260 aa2.2□□□□□ -2.06
CDC50YCR094W ERG1P32476 496 aaKnown RBP2.2□□□□□ -2.06
CDC50YCR094W RML2P32611 393 aa2.2□□□□□ -2.06
CDC50YCR094W MTR2P34232 184 aaKnown RBP2.2□□□□□ -2.06
CDC50YCR094W AFG3P39925 761 aa2.2□□□□□ -2.06
CDC50YCR094W ZIM17P42844 174 aa2.2□□□□□ -2.06
CDC50YCR094W SMC3P47037 1230 aa2.2□□□□□ -2.06
CDC50YCR094W ART5P53244 586 aaKnown RBP2.2□□□□□ -2.06
CDC50YCR094W VPS9P54787 451 aa2.2□□□□□ -2.06
CDC50YCR094W SLG1P54867 378 aa2.2□□□□□ -2.06
CDC50YCR094W OAZ1Q02803 292 aa2.2□□□□□ -2.06
CDC50YCR094W YDR286CQ05530 114 aa2.2□□□□□ -2.06
CDC50YCR094W TEN1Q07921 160 aa2.2□□□□□ -2.06
CDC50YCR094W ETT1Q08421 412 aaKnown RBP2.2□□□□□ -2.06
CDC50YCR094W NCE102Q12207 173 aaRIP-Chip data2.2□□□□□ -2.06not detected
CDC50YCR094W RRD2Q12461 358 aa2.2□□□□□ -2.06
CDC50YCR094W AFI1Q99222 893 aa2.2□□□□□ -2.06
CDC50YCR094W PEP4P07267 405 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W RAP1P11938 827 aa2.19□□□□□ -2.06
CDC50YCR094W RPL3P14126 387 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W SGV1P23293 657 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W MNE1P24720 663 aa2.19□□□□□ -2.06
CDC50YCR094W BOS1P25385 244 aa2.19□□□□□ -2.06
CDC50YCR094W YIM1P28625 365 aa2.19□□□□□ -2.06
CDC50YCR094W PAP1P29468 568 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W ATS1P31386 333 aa2.19□□□□□ -2.06
CDC50YCR094W SAC1P32368 623 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W ANP1P32629 500 aa2.19□□□□□ -2.06
CDC50YCR094W MDL1P33310 695 aa2.19□□□□□ -2.06
CDC50YCR094W MIC60P36112 540 aa2.19□□□□□ -2.06
CDC50YCR094W ERG7P38604 731 aa2.19□□□□□ -2.06
CDC50YCR094W RFC1P38630 861 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W MSR1P38714 643 aa2.19□□□□□ -2.06
CDC50YCR094W OTU2P38747 307 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W ANS1P38832 159 aa2.19□□□□□ -2.06
CDC50YCR094W YMR147WP40218 223 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W SEC28P40509 296 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W EFM4P40516 257 aa2.19□□□□□ -2.06
CDC50YCR094W CAK1P43568 368 aaPredicted RBP2.19□□□□□ -2.06
CDC50YCR094W FMS1P50264 508 aa2.19□□□□□ -2.06
CDC50YCR094W PYK2P52489 506 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W ERG26P53199 349 aaKnown RBP2.19□□□□□ -2.06
CDC50YCR094W KAP120Q02932 1032 aa2.19□□□□□ -2.06
CDC50YCR094W PDS5Q04264 1277 aa2.19□□□□□ -2.06
CDC50YCR094W VTA1Q06263 330 aa2.19□□□□□ -2.06
CDC50YCR094W MMR1Q06324 491 aa2.19□□□□□ -2.06
CDC50YCR094W PGC1Q08959 321 aa2.19□□□□□ -2.06
CDC50YCR094W GPM3Q12326 303 aa2.19□□□□□ -2.06
CDC50YCR094W SPT7P35177 1332 aa2.18□□□□□ -2.06
CDC50YCR094W PUT2P07275 575 aa2.18□□□□□ -2.06
CDC50YCR094W RPL31BP0C2H9 113 aaKnown RBP2.18□□□□□ -2.06
CDC50YCR094W PRP2P20095 876 aaPredicted RBP2.18□□□□□ -2.06
CDC50YCR094W RPB8P20436 146 aa2.18□□□□□ -2.06
CDC50YCR094W MCK1P21965 375 aaKnown RBP2.18□□□□□ -2.06
CDC50YCR094W PPH22P23595 377 aa2.18□□□□□ -2.06
CDC50YCR094W KRR1P25586 316 aaPredicted RBP2.18□□□□□ -2.06
CDC50YCR094W GEX1P25596 615 aa2.18□□□□□ -2.06
CDC50YCR094W YEL045CP32616 141 aa2.18□□□□□ -2.06
CDC50YCR094W YME2P32843 850 aa2.18□□□□□ -2.06
CDC50YCR094W YKL100CP34248 587 aa2.18□□□□□ -2.06
CDC50YCR094W MIA40P36046 403 aa2.18□□□□□ -2.06
CDC50YCR094W TUL1P36096 758 aa2.18□□□□□ -2.06
CDC50YCR094W HEL1P36113 551 aa2.18□□□□□ -2.06
CDC50YCR094W PIM1P36775 1133 aa2.18□□□□□ -2.06
CDC50YCR094W STV1P37296 890 aa2.18□□□□□ -2.06
CDC50YCR094W APE3P37302 537 aaKnown RBP2.18□□□□□ -2.06
CDC50YCR094W RPL32P38061 130 aaKnown RBP2.18□□□□□ -2.06
CDC50YCR094W SLM4P38247 162 aa2.18□□□□□ -2.06
CDC50YCR094W TIF5P38431 405 aaKnown RBP2.18□□□□□ -2.06
CDC50YCR094W DBP8P38719 431 aa2.18□□□□□ -2.06
CDC50YCR094W UBA4P38820 440 aa2.18□□□□□ -2.06
CDC50YCR094W CIN4P39110 191 aa2.18□□□□□ -2.06
CDC50YCR094W BUD27P43573 796 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
CDC50YCR094W ECM27P47144 725 aa2.18□□□□□ -2.06
CDC50YCR094W COS10P52924 374 aa2.18□□□□□ -2.06
CDC50YCR094W YGR127WP53275 312 aa2.18□□□□□ -2.06
CDC50YCR094W CAF130P53280 1122 aaPredicted RBP2.18□□□□□ -2.06
CDC50YCR094W RSM23Q01163 450 aa2.18□□□□□ -2.06
CDC50YCR094W PEX25Q02969 394 aa2.18□□□□□ -2.06
CDC50YCR094W GYL1Q04322 720 aa2.18□□□□□ -2.06
CDC50YCR094W EMI2Q04409 500 aaKnown RBP2.18□□□□□ -2.06
CDC50YCR094W ATG26Q06321 1198 aa2.18□□□□□ -2.06
CDC50YCR094W SIL1Q08199 421 aa2.18□□□□□ -2.06
CDC50YCR094W UAF30Q08747 228 aa2.18□□□□□ -2.06
CDC50YCR094W APL4Q12028 832 aa2.18□□□□□ -2.06
CDC50YCR094W SPE3Q12074 293 aaKnown RBP2.18□□□□□ -2.06
CDC50YCR094W YML133CQ03099 1374 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms