RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED4	YCR067C	SSO1	P32867	290 aa		4.89	□□□□□ -1.63
SED4	YCR067C	TSL1	P38427	1098 aa	Known RBP	4.89	□□□□□ -1.63
SED4	YCR067C	LSM12	P38828	187 aa	Known RBP	4.89	□□□□□ -1.63
SED4	YCR067C	ATM1	P40416	690 aa		4.89	□□□□□ -1.63
SED4	YCR067C	FKH2	P41813	862 aa		4.89	□□□□□ -1.63
SED4	YCR067C	AAD10	P47182	288 aa		4.89	□□□□□ -1.63
SED4	YCR067C	CEG1	Q01159	459 aa	Predicted RBP	4.89	□□□□□ -1.63
SED4	YCR067C	NUP116	Q02630	1113 aa		4.89	□□□□□ -1.63
SED4	YCR067C	CRF1	Q04930	467 aa		4.89	□□□□□ -1.63
SED4	YCR067C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SED4	YCR067C	RPN6	Q12377	434 aa		4.89	□□□□□ -1.63
SED4	YCR067C	MHF2	Q3E829	80 aa		4.89	□□□□□ -1.63
SED4	YCR067C	ALG7	P07286	448 aa		4.88	□□□□□ -1.63
SED4	YCR067C	PET494	P07390	489 aa	Predicted RBP	4.88	□□□□□ -1.63
SED4	YCR067C	NDI1	P32340	513 aa		4.88	□□□□□ -1.63
SED4	YCR067C	IXR1	P33417	597 aa		4.88	□□□□□ -1.63
SED4	YCR067C	PIM1	P36775	1133 aa		4.88	□□□□□ -1.63
SED4	YCR067C	ACA1	P39970	489 aa		4.88	□□□□□ -1.63
SED4	YCR067C	EAF5	P39995	279 aa		4.88	□□□□□ -1.63
SED4	YCR067C	ZRG8	P40021	1076 aa		4.88	□□□□□ -1.63
SED4	YCR067C	TED1	P40533	473 aa		4.88	□□□□□ -1.63
SED4	YCR067C	GAB1	P41733	394 aa		4.88	□□□□□ -1.63
SED4	YCR067C	SNG1	P46950	547 aa		4.88	□□□□□ -1.63
SED4	YCR067C	MDE1	P47095	244 aa		4.88	□□□□□ -1.63
SED4	YCR067C	MRX6	P48564	524 aa		4.88	□□□□□ -1.63
SED4	YCR067C	CWC25	P53854	179 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	GRX5	Q02784	150 aa		4.88	□□□□□ -1.63
SED4	YCR067C	NOG1	Q02892	647 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	COS7	Q07788	383 aa		4.88	□□□□□ -1.63
SED4	YCR067C	RRT8	Q08219	342 aa		4.88	□□□□□ -1.63
SED4	YCR067C	RBD2	Q12270	262 aa		4.88	□□□□□ -1.63
SED4	YCR067C	APC2	Q12440	853 aa		4.88	□□□□□ -1.63
SED4	YCR067C	ARG3	P05150	338 aa		4.88	□□□□□ -1.63
SED4	YCR067C	ADE5,7	P07244	802 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	ARG80	P07249	177 aa		4.88	□□□□□ -1.63
SED4	YCR067C	RED1	P14291	827 aa		4.88	□□□□□ -1.63
SED4	YCR067C	TKL1	P23254	680 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	YCK2	P23292	546 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	SHP1	P34223	423 aa		4.88	□□□□□ -1.63
SED4	YCR067C	LST4	P34239	828 aa		4.88	□□□□□ -1.63
SED4	YCR067C	ARA1	P38115	344 aa		4.88	□□□□□ -1.63
SED4	YCR067C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	RIP-Chip
SED4	YCR067C	FSH1	P38777	243 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	PHM8	P40025	321 aa		4.88	□□□□□ -1.63
SED4	YCR067C	PRM2	P40534	656 aa		4.88	□□□□□ -1.63
SED4	YCR067C	STR3	P53101	465 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	RRN5	Q02983	363 aa		4.88	□□□□□ -1.63
SED4	YCR067C	NSE5	Q03718	556 aa		4.88	□□□□□ -1.63
SED4	YCR067C	HPT1	Q04178	221 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	THP1	Q08231	455 aa		4.88	□□□□□ -1.63
SED4	YCR067C	COX6	P00427	148 aa		4.88	□□□□□ -1.63
SED4	YCR067C	HXK2	P04807	486 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	RPL4A	P10664	362 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	GLN3	P18494	730 aa		4.88	□□□□□ -1.63
SED4	YCR067C	YCK1	P23291	538 aa		4.88	□□□□□ -1.63
SED4	YCR067C	SGV1	P23293	657 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	GCD11	P32481	527 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	MSS1	P32559	526 aa	Predicted RBP	4.88	□□□□□ -1.63
SED4	YCR067C	GEP4	P38812	185 aa		4.88	□□□□□ -1.63
SED4	YCR067C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
SED4	YCR067C	RPL34B	P40525	121 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	IRC7	P43623	340 aa		4.88	□□□□□ -1.63
SED4	YCR067C	MDV1	P47025	714 aa		4.88	□□□□□ -1.63
SED4	YCR067C	ARH1	P48360	493 aa		4.88	□□□□□ -1.63
SED4	YCR067C	RPL4B	P49626	362 aa	Known RBP	4.88	□□□□□ -1.63
SED4	YCR067C	STB4	P50104	949 aa		4.88	□□□□□ -1.63
SED4	YCR067C	MON1	P53129	644 aa		4.88	□□□□□ -1.63
SED4	YCR067C	YPL071C	Q02864	156 aa		4.88	□□□□□ -1.63
SED4	YCR067C	RKM2	Q03942	479 aa		4.88	□□□□□ -1.63
SED4	YCR067C	YMR321C	Q04898	105 aa		4.88	□□□□□ -1.63
SED4	YCR067C	HUA2	Q12134	243 aa		4.88	□□□□□ -1.63
SED4	YCR067C	DSF1	P0CX08	502 aa		4.87	□□□□□ -1.63
SED4	YCR067C	YNR073C	P0CX09	502 aa		4.87	□□□□□ -1.63
SED4	YCR067C	MRP2	P10663	115 aa	Predicted RBP	4.87	□□□□□ -1.63
SED4	YCR067C	BAR1	P12630	587 aa		4.87	□□□□□ -1.63
SED4	YCR067C	NSP1	P14907	823 aa	Known RBP	4.87	□□□□□ -1.63
SED4	YCR067C	COQ8	P27697	501 aa		4.87	□□□□□ -1.63
SED4	YCR067C	ASK1	P35734	292 aa		4.87	□□□□□ -1.63
SED4	YCR067C	MRP21	P38175	177 aa		4.87	□□□□□ -1.63
SED4	YCR067C	YHR078W	P38799	552 aa		4.87	□□□□□ -1.63
SED4	YCR067C	PRM9	P39551	298 aa		4.87	□□□□□ -1.63
SED4	YCR067C	VRG4	P40107	337 aa		4.87	□□□□□ -1.63
SED4	YCR067C	ISM1	P48526	1002 aa		4.87	□□□□□ -1.63
SED4	YCR067C	YNL018C	P53976	612 aa		4.87	□□□□□ -1.63
SED4	YCR067C	HEH2	Q03281	663 aa		4.87	□□□□□ -1.63
SED4	YCR067C	CEF1	Q03654	590 aa	Predicted RBP	4.87	□□□□□ -1.63
SED4	YCR067C	TRM82	Q03774	444 aa		4.87	□□□□□ -1.63
SED4	YCR067C	SHS1	Q07657	551 aa		4.87	□□□□□ -1.63
SED4	YCR067C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SED4	YCR067C	SNU23	Q12368	194 aa	Predicted RBP	4.87	□□□□□ -1.63
SED4	YCR067C	LSO2	Q3E772	92 aa	Known RBP	4.87	□□□□□ -1.63
SED4	YCR067C	SYN8	P31377	255 aa		4.87	□□□□□ -1.63
SED4	YCR067C	PTM1	P32857	523 aa		4.87	□□□□□ -1.63
SED4	YCR067C	MRPL3	P36516	390 aa		4.87	□□□□□ -1.63
SED4	YCR067C	TAT1	P38085	619 aa		4.87	□□□□□ -1.63
SED4	YCR067C	SDH8	P38345	138 aa		4.87	□□□□□ -1.63
SED4	YCR067C	STE24	P47154	453 aa		4.87	□□□□□ -1.63
SED4	YCR067C	TRS31	Q03337	283 aa		4.87	□□□□□ -1.63
SED4	YCR067C	YDR109C	Q04585	715 aa		4.87	□□□□□ -1.63
SED4	YCR067C	BSC2	Q05611	235 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms