RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B RKM5Q12367 367 aa1.52□□□□□ -2.17
HTL1YCR020W-B PAH1P32567 862 aa1.51□□□□□ -2.17
HTL1YCR020W-B TCM62P38228 572 aaKnown RBP1.51□□□□□ -2.17
HTL1YCR020W-B AXL2P38928 823 aa1.51□□□□□ -2.17
HTL1YCR020W-B APT1P49435 187 aaKnown RBP1.51□□□□□ -2.17
HTL1YCR020W-B POP6P53218 158 aa1.51□□□□□ -2.17
HTL1YCR020W-B ART5P53244 586 aaKnown RBP1.51□□□□□ -2.17
HTL1YCR020W-B IPI3P53877 555 aa1.51□□□□□ -2.17
HTL1YCR020W-B GTR1Q00582 310 aa1.51□□□□□ -2.17
HTL1YCR020W-B YPL199CQ08954 240 aa1.51□□□□□ -2.17
HTL1YCR020W-B SGS1P35187 1447 aa1.5□□□□□ -2.17
HTL1YCR020W-B SAM1P10659 382 aaKnown RBP1.5□□□□□ -2.17
HTL1YCR020W-B MRP13P12686 339 aa1.5□□□□□ -2.17
HTL1YCR020W-B ART10P18634 518 aaKnown RBP1.5□□□□□ -2.17
HTL1YCR020W-B SAM2P19358 384 aaKnown RBP1.5□□□□□ -2.17
HTL1YCR020W-B MID2P36027 376 aa1.5□□□□□ -2.17
HTL1YCR020W-B MRPL10P36520 322 aa1.5□□□□□ -2.17
HTL1YCR020W-B SAP185P40856 1058 aa1.5□□□□□ -2.17
HTL1YCR020W-B OST1P41543 476 aaKnown RBP1.5□□□□□ -2.17
HTL1YCR020W-B RRT5P43607 289 aa1.5□□□□□ -2.17
HTL1YCR020W-B IBD2P53892 351 aa1.5□□□□□ -2.17
HTL1YCR020W-B CBK1P53894 756 aa1.5□□□□□ -2.17
HTL1YCR020W-B TOF2Q02208 771 aa1.5□□□□□ -2.17
HTL1YCR020W-B YML037CQ03703 340 aa1.5□□□□□ -2.17
HTL1YCR020W-B TSA2Q04120 196 aa1.5□□□□□ -2.17
HTL1YCR020W-B COQ9Q05779 260 aa1.5□□□□□ -2.17
HTL1YCR020W-B CDC24P11433 854 aaPredicted RBP1.49□□□□□ -2.17
HTL1YCR020W-B POL4P25615 582 aa1.49□□□□□ -2.17
HTL1YCR020W-B YIH1P25637 258 aa1.49□□□□□ -2.17
HTL1YCR020W-B BUB3P26449 341 aa1.49□□□□□ -2.17
HTL1YCR020W-B CRM1P30822 1084 aaKnown RBP1.49□□□□□ -2.17
HTL1YCR020W-B PTH2P34222 208 aa1.49□□□□□ -2.17
HTL1YCR020W-B ISC1P40015 477 aaKnown RBP1.49□□□□□ -2.17
HTL1YCR020W-B KAP123P40069 1113 aaKnown RBP1.49□□□□□ -2.17
HTL1YCR020W-B PRM5P40476 318 aa1.49□□□□□ -2.17
HTL1YCR020W-B ALK1P43633 760 aaKnown RBP1.49□□□□□ -2.17
HTL1YCR020W-B FMP40Q08968 688 aaPredicted RBP1.49□□□□□ -2.17
HTL1YCR020W-B SKM1Q12469 655 aa1.49□□□□□ -2.17
HTL1YCR020W-B EST1P17214 699 aaPredicted RBP1.48□□□□□ -2.17
HTL1YCR020W-B YCR100CP25606 316 aa1.48□□□□□ -2.17
HTL1YCR020W-B MNS1P32906 549 aa1.48□□□□□ -2.17
HTL1YCR020W-B STB6P36085 766 aa1.48□□□□□ -2.17
HTL1YCR020W-B POP1P41812 875 aa1.48□□□□□ -2.17
HTL1YCR020W-B SIP4P46954 829 aa1.48□□□□□ -2.17
HTL1YCR020W-B HSP26P15992 214 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
HTL1YCR020W-B MIX23P38162 196 aa1.47□□□□□ -2.17
HTL1YCR020W-B VID24P38263 362 aa1.47□□□□□ -2.17
HTL1YCR020W-B YHR131CP38835 850 aa1.47□□□□□ -2.17
HTL1YCR020W-B ARC1P46672 376 aaKnown RBP1.47□□□□□ -2.17
HTL1YCR020W-B YGR021WP53212 290 aa1.47□□□□□ -2.17
HTL1YCR020W-B BSC5P53755 489 aa1.47□□□□□ -2.17
HTL1YCR020W-B HEF3P53978 1044 aaKnown RBP1.47□□□□□ -2.17
HTL1YCR020W-B RSN1Q03516 953 aa1.47□□□□□ -2.17
HTL1YCR020W-B KEL3Q08979 651 aaPredicted RBP1.47□□□□□ -2.17
HTL1YCR020W-B YPL272CQ08984 517 aa1.47□□□□□ -2.17
HTL1YCR020W-B CCH1P50077 2039 aa1.46□□□□□ -2.18
HTL1YCR020W-B YAR066WP0CX18 203 aa1.46□□□□□ -2.18
HTL1YCR020W-B YHR214WP0CX19 203 aa1.46□□□□□ -2.18
HTL1YCR020W-B RPS8AP0CX39 200 aaKnown RBP1.46□□□□□ -2.18
HTL1YCR020W-B RPS8BP0CX40 200 aaKnown RBP1.46□□□□□ -2.18
HTL1YCR020W-B PAP1P29468 568 aaKnown RBP1.46□□□□□ -2.18
HTL1YCR020W-B MFT1P33441 392 aaKnown RBP1.46□□□□□ -2.18
HTL1YCR020W-B SEF1P34228 1148 aa1.46□□□□□ -2.18
HTL1YCR020W-B RIB5P38145 238 aa1.46□□□□□ -2.18
HTL1YCR020W-B YBL029WP38201 376 aa1.46□□□□□ -2.18
HTL1YCR020W-B MSG5P38590 489 aa1.46□□□□□ -2.18
HTL1YCR020W-B ALG5P40350 334 aa1.46□□□□□ -2.18
HTL1YCR020W-B AIM22P47051 409 aa1.46□□□□□ -2.18
HTL1YCR020W-B OGG1P53397 376 aaPredicted RBP1.46□□□□□ -2.18
HTL1YCR020W-B YSA1Q01976 231 aa1.46□□□□□ -2.18
HTL1YCR020W-B HER2Q03557 464 aa1.46□□□□□ -2.18
HTL1YCR020W-B SPE4Q12455 300 aa1.46□□□□□ -2.18
HTL1YCR020W-B FUM1P08417 488 aaKnown RBP1.45□□□□□ -2.18
HTL1YCR020W-B YCK1P23291 538 aa1.45□□□□□ -2.18
HTL1YCR020W-B ELO2P25358 347 aa1.45□□□□□ -2.18
HTL1YCR020W-B SPS22P25380 463 aa1.45□□□□□ -2.18
HTL1YCR020W-B MSR1P38714 643 aa1.45□□□□□ -2.18
HTL1YCR020W-B MBB1P39534 108 aa1.45□□□□□ -2.18
HTL1YCR020W-B CWC25P53854 179 aaKnown RBP1.45□□□□□ -2.18
HTL1YCR020W-B ODC1Q03028 310 aa1.45□□□□□ -2.18
HTL1YCR020W-B MUM3Q08750 479 aa1.45□□□□□ -2.18
HTL1YCR020W-B COR1P07256 457 aa1.44□□□□□ -2.18
HTL1YCR020W-B KAR3P17119 729 aa1.44□□□□□ -2.18
HTL1YCR020W-B ATP11P32453 318 aa1.44□□□□□ -2.18
HTL1YCR020W-B MRS6P32864 603 aaKnown RBP1.44□□□□□ -2.18
HTL1YCR020W-B MDG1P53885 366 aa1.44□□□□□ -2.18
HTL1YCR020W-B IGO1P53897 168 aa1.44□□□□□ -2.18
HTL1YCR020W-B LEU4P06208 619 aaKnown RBP1.43□□□□□ -2.18
HTL1YCR020W-B PRP2P20095 876 aaPredicted RBP1.43□□□□□ -2.18
HTL1YCR020W-B DPH1P40487 425 aaKnown RBP1.43□□□□□ -2.18
HTL1YCR020W-B SYG1P40528 902 aa1.43□□□□□ -2.18
HTL1YCR020W-B LYS14P40971 790 aa1.43□□□□□ -2.18
HTL1YCR020W-B LAM5P43560 674 aa1.43□□□□□ -2.18
HTL1YCR020W-B BRO1P48582 844 aa1.43□□□□□ -2.18
HTL1YCR020W-B IMD4P50094 524 aaKnown RBP1.43□□□□□ -2.18
HTL1YCR020W-B HXT11P54862 567 aa1.43□□□□□ -2.18
HTL1YCR020W-B PNG1Q02890 363 aa1.43□□□□□ -2.18
HTL1YCR020W-B RPC11Q04307 110 aaPredicted RBP1.43□□□□□ -2.18
HTL1YCR020W-B BRR1Q99177 341 aaPredicted RBP1.43□□□□□ -2.18
HTL1YCR020W-B NFT1P0CE68 1218 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms