RNA–Protein interactions for RNA: YBR054W

YRO2, Transcript of Protein of unknown function with similarity to archaeal rhodopsins, yeast

Gene YRO2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRO2	YBR054W	GLK1	P17709	500 aa	Known RBP	3.03	□□□□□ -1.92
YRO2	YBR054W	PMU1	P36069	295 aa		3.03	□□□□□ -1.92
YRO2	YBR054W	YEL057C	P39983	233 aa		3.03	□□□□□ -1.92
YRO2	YBR054W	SHO1	P40073	367 aa		3.03	□□□□□ -1.92
YRO2	YBR054W	ALG8	P40351	577 aa		3.03	□□□□□ -1.92
YRO2	YBR054W	DOT5	P40553	215 aa		3.03	□□□□□ -1.92
YRO2	YBR054W	PET130	P47065	347 aa		3.03	□□□□□ -1.92
YRO2	YBR054W	RBS1	Q05672	457 aa	Known RBP	3.03	□□□□□ -1.92
YRO2	YBR054W	CFT2	Q12102	859 aa	Predicted RBP	3.03	□□□□□ -1.92
YRO2	YBR054W	YDL007C-A	Q2V2Q0	85 aa		3.03	□□□□□ -1.92
YRO2	YBR054W	HEM2	P05373	342 aa		3.02	□□□□□ -1.93
YRO2	YBR054W	AGA1	P32323	725 aa		3.02	□□□□□ -1.93
YRO2	YBR054W	MBB1	P39534	108 aa		3.02	□□□□□ -1.93
YRO2	YBR054W	HAT2	P39984	401 aa		3.02	□□□□□ -1.93
YRO2	YBR054W	NDE1	P40215	560 aa		3.02	□□□□□ -1.93
YRO2	YBR054W	SPO22	P40511	975 aa		3.02	□□□□□ -1.93
YRO2	YBR054W	TIM10	P87108	93 aa		3.02	□□□□□ -1.93
YRO2	YBR054W	RPT6	Q01939	405 aa	Known RBP	3.02	□□□□□ -1.93
YRO2	YBR054W	YDR239C	Q03780	787 aa		3.02	□□□□□ -1.93
YRO2	YBR054W	TSR2	Q06672	205 aa	Known RBP	3.02	□□□□□ -1.93
YRO2	YBR054W	KEL3	Q08979	651 aa	Predicted RBP	3.02	□□□□□ -1.93
YRO2	YBR054W	SEC39	Q12745	709 aa		3.02	□□□□□ -1.93
YRO2	YBR054W	RAV1	P47104	1357 aa		3.01	□□□□□ -1.93
YRO2	YBR054W	MES1	P00958	751 aa	Known RBP	3.01	□□□□□ -1.93
YRO2	YBR054W	TUL1	P36096	758 aa		3.01	□□□□□ -1.93
YRO2	YBR054W	CST26	P38226	397 aa		3.01	□□□□□ -1.93
YRO2	YBR054W	IDP2	P41939	412 aa		3.01	□□□□□ -1.93
YRO2	YBR054W	ELP2	P42935	788 aa		3.01	□□□□□ -1.93
YRO2	YBR054W	YJL132W	P47014	750 aa		3.01	□□□□□ -1.93
YRO2	YBR054W	TWF1	P53250	332 aa		3.01	□□□□□ -1.93
YRO2	YBR054W	CAF130	P53280	1122 aa	Predicted RBP	3.01	□□□□□ -1.93
YRO2	YBR054W	BOR1	P53838	576 aa		3.01	□□□□□ -1.93
YRO2	YBR054W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
YRO2	YBR054W	SLG1	P54867	378 aa		3.01	□□□□□ -1.93
YRO2	YBR054W	ARG3	P05150	338 aa		3	□□□□□ -1.93
YRO2	YBR054W	RPL31B	P0C2H9	113 aa	Known RBP	3	□□□□□ -1.93
YRO2	YBR054W	MRP7	P12687	371 aa		3	□□□□□ -1.93
YRO2	YBR054W	PUT3	P25502	979 aa	Predicted RBP	3	□□□□□ -1.93
YRO2	YBR054W	ATP11	P32453	318 aa		3	□□□□□ -1.93
YRO2	YBR054W	YBP1	P38315	674 aa		3	□□□□□ -1.93
YRO2	YBR054W	TIF5	P38431	405 aa	Known RBP	3	□□□□□ -1.93
YRO2	YBR054W	GWT1	P47026	490 aa		3	□□□□□ -1.93
YRO2	YBR054W	URB2	P47108	1174 aa		3	□□□□□ -1.93
YRO2	YBR054W	PDS5	Q04264	1277 aa		3	□□□□□ -1.93
YRO2	YBR054W	MRD1	Q06106	887 aa	Known RBP	3	□□□□□ -1.93
YRO2	YBR054W	TLG2	Q08144	397 aa		3	□□□□□ -1.93
YRO2	YBR054W	RKM5	Q12367	367 aa		3	□□□□□ -1.93
YRO2	YBR054W	CTF3	Q12748	733 aa		3	□□□□□ -1.93
YRO2	YBR054W	CBS2	P14905	389 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	RNA14	P25298	677 aa	Known RBP	2.99	□□□□□ -1.93
YRO2	YBR054W	BUB3	P26449	341 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	SEC66	P33754	206 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	VID24	P38263	362 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	KEL1	P38853	1164 aa	Known RBP	2.99	□□□□□ -1.93
YRO2	YBR054W	FAU1	P40099	211 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	MET18	P40469	1032 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	SYG1	P40528	902 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	ARF3	P40994	183 aa	RIP-Chip data	2.99	□□□□□ -1.93	not detected
YRO2	YBR054W	ATG29	Q12092	213 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	YLL056C	Q12177	298 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	RTP1	Q12751	981 aa		2.99	□□□□□ -1.93
YRO2	YBR054W	LPD1	P09624	499 aa	Known RBP	2.98	□□□□□ -1.93
YRO2	YBR054W	BLI1	P35727	113 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	CMC1	P36064	111 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	AVT5	P38176	459 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	PCA1	P38360	1216 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	UTP9	P38882	575 aa	Known RBP	2.98	□□□□□ -1.93
YRO2	YBR054W	YMR147W	P40218	223 aa	Known RBP	2.98	□□□□□ -1.93
YRO2	YBR054W	POP1	P41812	875 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	IRC6	P43615	237 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	OCA1	P50946	238 aa	Predicted RBP	2.98	□□□□□ -1.93
YRO2	YBR054W	MSO1	P53604	210 aa	Known RBP	2.98	□□□□□ -1.93
YRO2	YBR054W	WSC2	P53832	503 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	JJJ1	P53863	590 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	TAP42	Q04372	366 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	RIM20	Q12033	661 aa		2.98	□□□□□ -1.93
YRO2	YBR054W	PMR1	P13586	950 aa		2.97	□□□□□ -1.93
YRO2	YBR054W	FUN19	P28003	413 aa	Predicted RBP	2.97	□□□□□ -1.93
YRO2	YBR054W	NFU1	P32860	256 aa		2.97	□□□□□ -1.93
YRO2	YBR054W	PMT1	P33775	817 aa		2.97	□□□□□ -1.93
YRO2	YBR054W	HXT14	P42833	540 aa		2.97	□□□□□ -1.93
YRO2	YBR054W	YGL108C	P53139	140 aa		2.97	□□□□□ -1.93
YRO2	YBR054W	SPC19	Q03954	165 aa		2.97	□□□□□ -1.93
YRO2	YBR054W	HNT3	Q08702	217 aa		2.97	□□□□□ -1.93
YRO2	YBR054W	YCL021W-A	Q96VH3	125 aa		2.97	□□□□□ -1.93
YRO2	YBR054W	CDC31	P06704	161 aa	Known RBP	2.96	□□□□□ -1.94
YRO2	YBR054W	YOX1	P34161	385 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	FRE2	P36033	711 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	RSM22	P36056	628 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	YBR139W	P38109	508 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	ESL1	P40456	1118 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	VTC2	P43585	828 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	SRB7	P47822	140 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	OGG1	P53397	376 aa	Predicted RBP	2.96	□□□□□ -1.94
YRO2	YBR054W	ARK1	P53974	638 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	RQC1	Q05468	723 aa	Known RBP	2.96	□□□□□ -1.94
YRO2	YBR054W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
YRO2	YBR054W	RSA1	Q08932	381 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	GRX6	Q12438	231 aa		2.96	□□□□□ -1.94
YRO2	YBR054W	LEU4	P06208	619 aa	Known RBP	2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms