RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YGR127WP53275 312 aa2.22□□□□□ -2.05
NUP170YBL079W ACS1Q01574 713 aa2.22□□□□□ -2.05
NUP170YBL079W UTP6Q02354 440 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W SHR3Q02774 210 aa2.22□□□□□ -2.05
NUP170YBL079W SVL3Q03088 825 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W SSY1Q03770 852 aa2.22□□□□□ -2.05
NUP170YBL079W YOR365CQ08844 703 aa2.22□□□□□ -2.05
NUP170YBL079W WTM2Q12206 467 aa2.22□□□□□ -2.05
NUP170YBL079W NTO1Q12311 748 aa2.22□□□□□ -2.05
NUP170YBL079W YBL111CQ3E7Y5 667 aa2.22□□□□□ -2.05
NUP170YBL079W STE3P06783 470 aa2.22□□□□□ -2.05
NUP170YBL079W YAR066WP0CX18 203 aa2.22□□□□□ -2.05
NUP170YBL079W YHR214WP0CX19 203 aa2.22□□□□□ -2.05
NUP170YBL079W CBS1P14066 229 aa2.22□□□□□ -2.05
NUP170YBL079W RPO26P20435 155 aa2.22□□□□□ -2.05
NUP170YBL079W YET1P35723 206 aa2.22□□□□□ -2.05
NUP170YBL079W CTP1P38152 299 aa2.22□□□□□ -2.05
NUP170YBL079W PSY4P38193 441 aa2.22□□□□□ -2.05
NUP170YBL079W HRB1P38922 454 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
NUP170YBL079W MBP1P39678 833 aa2.22□□□□□ -2.05
NUP170YBL079W SOK1P40317 901 aa2.22□□□□□ -2.05
NUP170YBL079W YTA6P40328 754 aa2.22□□□□□ -2.05
NUP170YBL079W CAB2P40506 365 aa2.22□□□□□ -2.05
NUP170YBL079W PKP1P40530 394 aa2.22□□□□□ -2.05
NUP170YBL079W PFA3P42836 336 aa2.22□□□□□ -2.05
NUP170YBL079W SLS1P42900 643 aa2.22□□□□□ -2.05
NUP170YBL079W GUS1P46655 708 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
NUP170YBL079W BTN2P53286 410 aa2.22□□□□□ -2.05
NUP170YBL079W CDC123Q05791 360 aa2.22□□□□□ -2.05
NUP170YBL079W HRI1Q05905 244 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W YPS7Q06325 596 aa2.22□□□□□ -2.05
NUP170YBL079W SMF3Q12078 473 aaPredicted RBP2.22□□□□□ -2.05
NUP170YBL079W SFM1Q12314 213 aa2.22□□□□□ -2.05
NUP170YBL079W FRE7Q12333 620 aa2.22□□□□□ -2.05
NUP170YBL079W FLP1P03870 423 aa2.21□□□□□ -2.05
NUP170YBL079W BI2P03873 423 aa2.21□□□□□ -2.05
NUP170YBL079W ERR1P0CX10 437 aa2.21□□□□□ -2.05
NUP170YBL079W ERR2P0CX11 437 aa2.21□□□□□ -2.05
NUP170YBL079W GUK1P15454 187 aaKnown RBP2.21□□□□□ -2.05
NUP170YBL079W PDX1P16451 410 aa2.21□□□□□ -2.05
NUP170YBL079W ILV6P25605 309 aaKnown RBP2.21□□□□□ -2.05
NUP170YBL079W CPR3P25719 182 aa2.21□□□□□ -2.05
NUP170YBL079W IME2P32581 645 aa2.21□□□□□ -2.05
NUP170YBL079W RRN10P38204 145 aa2.21□□□□□ -2.05
NUP170YBL079W MNN1P39106 762 aa2.21□□□□□ -2.05
NUP170YBL079W YPS6P40583 537 aa2.21□□□□□ -2.05
NUP170YBL079W ERR3P42222 437 aa2.21□□□□□ -2.05
NUP170YBL079W CCT7P42943 550 aaKnown RBP2.21□□□□□ -2.05
NUP170YBL079W ABM1P47146 123 aa2.21□□□□□ -2.05
NUP170YBL079W BRO1P48582 844 aa2.21□□□□□ -2.05
NUP170YBL079W BOL2P53082 120 aa2.21□□□□□ -2.05
NUP170YBL079W YNL140CP53910 189 aa2.21□□□□□ -2.05
NUP170YBL079W YLR460CP54007 376 aa2.21□□□□□ -2.05
NUP170YBL079W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.21□□□□□ -2.05not detected
NUP170YBL079W PFK27Q12471 397 aaPredicted RBP2.21□□□□□ -2.05
NUP170YBL079W AVL9Q12500 764 aa2.21□□□□□ -2.05
NUP170YBL079W BI3Q9ZZW7 517 aa2.21□□□□□ -2.05
NUP170YBL079W GCD1P09032 578 aaPredicted RBP2.21□□□□□ -2.06
NUP170YBL079W SPS4P09937 338 aa2.21□□□□□ -2.06
NUP170YBL079W YFR010W-AP0C5N0 62 aa2.21□□□□□ -2.06
NUP170YBL079W RPP1BP10622 106 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W YCK1P23291 538 aa2.21□□□□□ -2.06
NUP170YBL079W YSR3P23501 404 aa2.21□□□□□ -2.06
NUP170YBL079W CDC12P32468 407 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W ARC19P33204 171 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W RPS1AP33442 255 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W MSN2P33748 704 aa2.21□□□□□ -2.06
NUP170YBL079W NCL1P38205 684 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W YHL012WP38709 493 aa2.21□□□□□ -2.06
NUP170YBL079W GGC1P38988 300 aa2.21□□□□□ -2.06
NUP170YBL079W PAN6P40459 309 aa2.21□□□□□ -2.06
NUP170YBL079W PAC11P40960 533 aa2.21□□□□□ -2.06
NUP170YBL079W PSA1P41940 361 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W HXT16P47185 567 aa2.21□□□□□ -2.06
NUP170YBL079W RIM21P48565 533 aa2.21□□□□□ -2.06
NUP170YBL079W COG1P53079 417 aa2.21□□□□□ -2.06
NUP170YBL079W YGR015CP53208 328 aa2.21□□□□□ -2.06
NUP170YBL079W YNL092WP53934 400 aa2.21□□□□□ -2.06
NUP170YBL079W HXT15P54854 567 aa2.21□□□□□ -2.06
NUP170YBL079W NBA1Q08229 501 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W RDR1Q08904 546 aa2.21□□□□□ -2.06
NUP170YBL079W AFT2Q08957 416 aa2.21□□□□□ -2.06
NUP170YBL079W COX5AP00424 153 aa2.21□□□□□ -2.06
NUP170YBL079W HXK2P04807 486 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W AMS1P22855 1083 aa2.21□□□□□ -2.06
NUP170YBL079W SIS1P25294 352 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W RRN6P32786 894 aa2.21□□□□□ -2.06
NUP170YBL079W RPT5P33297 434 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W MPE1P35728 441 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W MRPL10P36520 322 aa2.21□□□□□ -2.06
NUP170YBL079W TCD1P38756 429 aa2.21□□□□□ -2.06
NUP170YBL079W FLC2P39719 783 aa2.21□□□□□ -2.06
NUP170YBL079W LAS21P40367 830 aa2.21□□□□□ -2.06
NUP170YBL079W NEO1P40527 1151 aa2.21□□□□□ -2.06
NUP170YBL079W TRM9P49957 279 aa2.21□□□□□ -2.06
NUP170YBL079W NAS6P50086 228 aa2.21□□□□□ -2.06
NUP170YBL079W CLD1P53264 445 aa2.21□□□□□ -2.06
NUP170YBL079W CWC22P53333 577 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W ERG5P54781 538 aa2.21□□□□□ -2.06
NUP170YBL079W MMT1Q03218 510 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms