RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	AAC1	P04710	309 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
GEM1	YAL048C	GCD2	P12754	651 aa	Predicted RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	CDC43	P18898	376 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	MEI5	P32489	222 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	COT1	P32798	439 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
GEM1	YAL048C	CUE2	P36075	443 aa	Known RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	GDT1	P38301	280 aa	Predicted RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	RRT2	P38332	387 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	SIP3	P38717	1229 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	WSS1	P38838	269 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	YHB1	P39676	399 aa	Known RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	ELP2	P42935	788 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	EFM3	P47163	339 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	VPS4	P52917	437 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	YGL117W	P53133	265 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	PIB2	P53191	635 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	YNL144C	P53907	740 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	AQR1	P53943	586 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	RTN1	Q04947	295 aa	Known RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	BCP1	Q06338	283 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	GSH2	Q08220	491 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	UAF30	Q08747	228 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	YJR112W-A	Q3E743	109 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	Q0010	Q9ZZX9	128 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	MSS116	P15424	664 aa	Known RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	URK1	P27515	501 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	ITR1	P30605	584 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	GDA1	P32621	518 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	STV1	P37296	890 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	THI2	P38141	450 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	LNP1	P38878	278 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	MNN9	P39107	395 aa	Known RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	SLZ1	P40167	298 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	ULP2	P40537	1034 aa	Predicted RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	APT1	P49435	187 aa	Known RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	VPS73	P53142	486 aa	Known RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	MPP6	P53725	186 aa	Predicted RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	CPR8	P53728	308 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	RTC4	P53850	401 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	KAP120	Q02932	1032 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	URC2	Q04411	772 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	RQC1	Q05468	723 aa	Known RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	DCI1	Q08558	271 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	SPE4	Q12455	300 aa		3.93	□□□□□ -1.78
GEM1	YAL048C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.93	□□□□□ -1.78
GEM1	YAL048C	WHI2	P12611	486 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	SYN8	P31377	255 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	ALY1	P36117	915 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	BZZ1	P38822	633 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	MSS2	P40990	351 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	YGR066C	P53242	292 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	RHO5	P53879	331 aa	Known RBP	3.92	□□□□□ -1.78
GEM1	YAL048C	INN1	P53901	409 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	YNL143C	P53908	130 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	KTR6	P54070	446 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	UBP16	Q02863	499 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	CUR1	Q06469	252 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	YEH1	Q07804	573 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	ETT1	Q08421	412 aa	Known RBP	3.92	□□□□□ -1.78
GEM1	YAL048C	ATG29	Q12092	213 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.92	□□□□□ -1.78	not detected
GEM1	YAL048C	NBL1	Q3E7Y6	73 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	VCX1	Q99385	411 aa		3.92	□□□□□ -1.78
GEM1	YAL048C	SSK22	P25390	1331 aa	Predicted RBP	3.91	□□□□□ -1.78
GEM1	YAL048C	RTC1	Q08281	1341 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	LPD1	P09624	499 aa	Known RBP	3.91	□□□□□ -1.78
GEM1	YAL048C	CLN1	P20437	546 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	ERG8	P24521	451 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	BMH2	P34730	273 aa	Known RBP	3.91	□□□□□ -1.78
GEM1	YAL048C	MRPL37	P36532	105 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	TDP1	P38319	544 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	SSO2	P39926	295 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	ASG1	P40467	964 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	IMO32	P53219	342 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	MUB1	Q03162	620 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	PPM1	Q04081	328 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	YLR297W	Q05899	129 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	YDL242W	Q07746	117 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	IRC10	Q08118	586 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	CRT10	Q08226	957 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	SUT2	Q12286	268 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	YBR255C-A	Q3E776	120 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	YPT6	Q99260	215 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	RAD61	Q99359	647 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	YML133C	Q03099	1374 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	YLL066C	Q99208	1374 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	ATP2	P00830	511 aa	Known RBP	3.91	□□□□□ -1.78
GEM1	YAL048C	HXK2	P04807	486 aa	Known RBP	3.91	□□□□□ -1.78
GEM1	YAL048C	PRP2	P20095	876 aa	Predicted RBP	3.91	□□□□□ -1.78
GEM1	YAL048C	PDE1	P22434	369 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	BOS1	P25385	244 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	ERG1	P32476	496 aa	Known RBP	3.91	□□□□□ -1.78
GEM1	YAL048C	GCD7	P32502	381 aa	Predicted RBP	3.91	□□□□□ -1.78
GEM1	YAL048C	YKR015C	P36111	568 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	ATP3	P38077	311 aa	Known RBP	3.91	□□□□□ -1.78
GEM1	YAL048C	MSR1	P38714	643 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	TCD1	P38756	429 aa		3.91	□□□□□ -1.78
GEM1	YAL048C	CCT6	P39079	546 aa		3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms