RNA–Protein interactions for RNA: YAL003W

EFB1, Transcript of Translation elongation factor 1 beta, yeast

Gene EFB1, Length 621 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EFB1	YAL003W	RRP3	P38712	501 aa	Known RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	BAT1	P38891	393 aa	Known RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	PCF11	P39081	626 aa	Predicted RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	YEL073C	P39974	107 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	SPF1	P39986	1215 aa	Known RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	GIM4	P40005	111 aa	Known RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	YEN1	P40028	759 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	LSM5	P40089	93 aa	Known RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	YJL070C	P40361	888 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	UTP18	P40362	594 aa	Predicted RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	RLP7	P40693	322 aa	Known RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	GCD10	P41814	478 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	YRB1	P41920	201 aa	Known RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	CCT7	P42943	550 aa	Known RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	TMA22	P47089	198 aa	Predicted RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	TIS11	P47977	285 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	NAS6	P50086	228 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	MDM34	P53083	459 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	YGR015C	P53208	328 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	CWC24	P53769	259 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	YNL010W	P53981	241 aa	Known RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	GTR1	Q00582	310 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	YMR034C	Q05131	434 aa	Predicted RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	RIF2	Q06208	395 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	PLB3	Q08108	686 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	ESA1	Q08649	445 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	GPB1	Q08886	897 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	YIG1	Q08956	461 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	YLR049C	Q12110	428 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	RRP42	Q12277	265 aa	Predicted RBP	4.08	□□□□□ -1.76
EFB1	YAL003W	NAG1	Q8TGN9	163 aa		4.08	□□□□□ -1.76
EFB1	YAL003W	MDM35	O60200	86 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	COX3	P00420	269 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	FUM1	P08417	488 aa	Known RBP	4.07	□□□□□ -1.76
EFB1	YAL003W	CLN2	P20438	545 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	PHO91	P27514	894 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	CIN8	P27895	1000 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	RAD14	P28519	371 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	PDB1	P32473	366 aa	Known RBP	4.07	□□□□□ -1.76
EFB1	YAL003W	SDH3	P33421	198 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	CUE2	P36075	443 aa	Known RBP	4.07	□□□□□ -1.76
EFB1	YAL003W	SRX1	P36077	127 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	MET18	P40469	1032 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	IAH1	P41734	238 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	VMA13	P41807	478 aa	Known RBP	4.07	□□□□□ -1.76
EFB1	YAL003W	FKH2	P41813	862 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	STB2	P46679	850 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	YJR149W	P47177	404 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	YJR154W	P47181	346 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	MIG2	P53035	382 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	NNF2	P53253	936 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	SSY1	Q03770	852 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	GTB1	Q04924	702 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	YML053C	Q04978	212 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	YDR338C	Q05497	695 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	GLO2	Q05584	274 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	RAD34	Q06665	692 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	YLR413W	Q06689	675 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	UAF30	Q08747	228 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	PST1	Q12355	444 aa		4.07	□□□□□ -1.76
EFB1	YAL003W	BRR1	Q99177	341 aa	Predicted RBP	4.07	□□□□□ -1.76
EFB1	YAL003W	HSH49	Q99181	213 aa	Predicted RBP	4.07	□□□□□ -1.76
EFB1	YAL003W	MSB2	P32334	1306 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	COS2	P0CX12	379 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	COS3	P0CX13	379 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	RPS4A	P0CX35	261 aa	Known RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	RPS4B	P0CX36	261 aa	Known RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	SCL1	P21243	252 aa	Known RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	ATP11	P32453	318 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
EFB1	YAL003W	RMA1	P36001	430 aa	Known RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	CAF4	P36130	643 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	MRPL37	P36532	105 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	SOL2	P37262	315 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	MUM2	P38236	366 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	YBR071W	P38243	211 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	BMT2	P38278	337 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	FZO1	P38297	855 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	FTH1	P38310	465 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	DED81	P38707	554 aa	Known RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	WSC4	P38739	605 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	YPT35	P38815	214 aa	Known RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	YHR127W	P38833	243 aa	Known RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	PFS1	P38872	237 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	PFA3	P42836	336 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	COS4	P43542	379 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	MET12	P46151	657 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	YJR030C	P47101	745 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	MTR3	P48240	250 aa	Predicted RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	IMA1	P53051	589 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	USE1	P53146	245 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	YGR053C	P53234	283 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	SNO2	P53823	222 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	YNL260C	P53846	198 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	REX2	P54964	269 aa	Known RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	YMR111C	Q04461	462 aa	Predicted RBP	4.06	□□□□□ -1.76
EFB1	YAL003W	CDA1	Q06702	301 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	YEH2	Q07950	538 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	MCH5	Q08777	521 aa		4.06	□□□□□ -1.76
EFB1	YAL003W	RTT10	Q08924	1013 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms