RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 PAFAH1B1P43034 410 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 POLE2P56282 527 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 GTF2IP78347 998 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 PDE4BQ07343 736 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 ENAHQ8N8S7 591 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 DYNLL2Q96FJ2 89 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 MASTLQ96GX5 879 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 CRNKL1Q9BZJ0 848 aaKnown RBP13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 MROH7-TTC4A0A0A0MT08 1334 aa13.13□□□□□ -0.31
RBFOX1-224ENST00000641259 KIF28PB7ZC32 967 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 ZBTB43O43298 467 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 FGRP09769 529 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 PCK1P35558 622 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 CYP27A1Q02318 531 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 IFFO1Q0D2I5 559 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 FAM47AQ5JRC9 791 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 NSMCE1Q8WV22 266 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 SH3GL3Q99963 347 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 SELENOSQ9BQE4 189 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 GUCY1A2P33402 732 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 UBXN1Q04323 297 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 C2CD5Q86YS7 1000 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 MCM9Q9NXL9 1143 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 hCG_2014768A0A024R1R8 64 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 ATP1A1P05023 1023 aaKnown RBP13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 PDHA1P08559 390 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 MYBL2P10244 700 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 SAFBQ15424 915 aaKnown RBP eCLIP13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 TGFBRAP1Q8WUH2 860 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 PAIP2Q9BPZ3 127 aaKnown RBP13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 SLC12A7Q9Y666 1083 aa13.12□□□□□ -0.31
RBFOX1-224ENST00000641259 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 CNGA1P29973 690 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 BTDP43251 543 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 PLCD1P51178 756 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 NCAPHQ15003 741 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 WTAPQ15007 396 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 DPP8Q6V1X1 898 aaPredicted RBP13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 ATP8A2Q9NTI2 1148 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 DDX20Q9UHI6 824 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 SAP30BPQ9UHR5 308 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 SERTAD1Q9UHV2 236 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 SCN9AQ15858 1988 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 VAV2P52735 878 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 IQCEQ6IPM2 695 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 UBXN6Q9BZV1 441 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 TRIM21P19474 475 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 CKAP4Q07065 602 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 ACCSLQ4AC99 568 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 PROCA1Q8NCQ7 364 aaPredicted RBP13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 ENGASEQ8NFI3 743 aa13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 TTF2Q9UNY4 1162 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-224ENST00000641259 RHBDL3P58872 404 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 C8orf74Q6P047 294 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 ESR2Q92731 530 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 STAMBPL1Q96FJ0 436 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 ZSCAN10Q96SZ4 725 aaPredicted RBP13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 SH3BP1Q9Y3L3 701 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 NID2Q14112 1375 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 DIAPH2O60879 1101 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 FMR1Q06787 632 aaKnown RBP eCLIP13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 CYB5D1Q6P9G0 228 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 SHISA4Q96DD7 197 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 DBNDD1Q9H9R9 158 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 FOCADQ5VW36 1801 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 MXRA7P84157 204 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 SPA17Q15506 151 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 RRAGBQ5VZM2 374 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 FCHSD1Q86WN1 690 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 ZNF654Q8IZM8 581 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 UHMK1Q8TAS1 419 aaKnown RBP13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 UBLCP1Q8WVY7 318 aaPredicted RBP13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 TRIM31Q9BZY9 425 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 STK32BQ9NY57 414 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 CTNND2Q9UQB3 1225 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 SNED1Q8TER0 1413 aa13.1□□□□□ -0.31
RBFOX1-224ENST00000641259 VIMP08670 466 aaKnown RBP13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 C12orf60Q5U649 245 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 NAA35Q5VZE5 725 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 FAM205AQ6ZU69 1335 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 RNPC3Q96LT9 517 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms