RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 COG5Q9UP83 839 aa12.4□□□□□ -0.42
HNRNPU-227ENST00000640264 MTCH2Q9Y6C9 303 aa12.4□□□□□ -0.42
HNRNPU-227ENST00000640264 PLIN4Q96Q06 1357 aa12.4□□□□□ -0.42
HNRNPU-227ENST00000640264 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.43
HNRNPU-227ENST00000640264 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 TNKSO95271 1327 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 M0R2C6 588 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 RFXAPO00287 272 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 PLA2G6O60733 806 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 CA3P07451 260 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 CYP2C9P11712 490 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 PTGS1P23219 599 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 RFC2P35250 354 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 NEK4P51957 841 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 ZNF445P59923 1031 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 DUSP28Q4G0W2 176 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 DEFB128Q7Z7B8 93 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 KCNB2Q92953 911 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 CHMP4CQ96CF2 233 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 SLC9A7Q96T83 725 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 FSD1Q9BTV5 496 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 ANO2Q9NQ90 1003 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 GPHNQ9NQX3 736 aaPredicted RBP12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 LMBRD1Q9NUN5 540 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 TRMT13Q9NUP7 481 aaKnown RBP12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 CYP39A1Q9NYL5 469 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 HCN4Q9Y3Q4 1203 aa12.39□□□□□ -0.43
HNRNPU-227ENST00000640264 KIF28PB7ZC32 967 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 BRD1O95696 1058 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 CPT1AP50416 773 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 BRDTQ58F21 947 aaPredicted RBP12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 MUM1L1Q5H9M0 696 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 TMEM63BQ5T3F8 832 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 RCSD1Q6JBY9 416 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 IFNL3Q8IZI9 196 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 RETREG2Q8NC44 543 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 PHOSPHO2Q8TCD6 241 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 MORC4Q8TE76 937 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 VWCEQ96DN2 955 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 LSG1Q9H089 658 aaKnown RBP12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 CERS4Q9HA82 394 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 ADD3Q9UEY8 706 aaKnown RBP12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 CCPG1Q9ULG6 757 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 ZDHHC9Q9Y397 364 aa12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 ARIH1Q9Y4X5 557 aaPredicted RBP12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 DDX49Q9Y6V7 483 aaKnown RBP12.38□□□□□ -0.43
HNRNPU-227ENST00000640264 SCN5AQ14524 2016 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 MYL3P08590 195 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 SNAP25P60880 206 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 PURAQ00577 322 aaKnown RBP12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 FAM47CQ5HY64 1035 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 KCTD1Q719H9 257 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 RUFY2Q8WXA3 655 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 ARNTL2Q8WYA1 636 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 HLA-CQ95604 372 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 MTG1Q9BT17 334 aaPredicted RBP12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 FTOQ9C0B1 505 aaKnown RBP eCLIP12.37□□□□□ -0.436e-6■□□□□ 9
HNRNPU-227ENST00000640264 NAPBQ9H115 298 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 EPHX3Q9H6B9 360 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 PRR12Q9ULL5 1215 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 STX8Q9UNK0 236 aa12.37□□□□□ -0.43
HNRNPU-227ENST00000640264 LOC102724159A0A0B4J2E5 919 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 HIP1O00291 1037 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 KPNA6O60684 536 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 ICAM1P05362 532 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 HOXD11P31277 338 aaPredicted RBP12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 TAP1Q03518 808 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 PPARAQ07869 468 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 PWP2Q15269 919 aaKnown RBP12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 TMEM31Q5JXX7 168 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 HERC6Q8IVU3 1022 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 OR6J1Q8NGC5 347 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 TTC14Q96N46 770 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 PURBQ96QR8 312 aaKnown RBP12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 SEC62Q99442 399 aaKnown RBP12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 LRFN3Q9BTN0 628 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
HNRNPU-227ENST00000640264 LCTP09848 1927 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 EPOPA6NHQ4 379 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 TSPY2A6NKD2 308 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 TLL1O43897 1013 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 IQCF3P0C7M6 154 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 ALDH5A1P51649 535 aaPredicted RBP12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 BFSP2Q13515 415 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 BAATQ14032 418 aaPredicted RBP12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 ZMYM1Q5SVZ6 1142 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 KRT40Q6A162 431 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 NFRKBQ6P4R8 1299 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 MPHOSPH6Q99547 160 aaKnown RBP12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 NOD1Q9Y239 953 aa12.35□□□□□ -0.43
HNRNPU-227ENST00000640264 RBM47A0AV96 593 aaKnown RBP12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 PTPDC1A2A3K4 754 aa12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 NKRFO15226 690 aaKnown RBP eCLIP12.34□□□□□ -0.43
HNRNPU-227ENST00000640264 BAIAP3O94812 1187 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms