RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 UBE2SQ16763 222 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 LRRC26Q2I0M4 334 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 ARHGEF16Q5VV41 709 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 TYW1BQ6NUM6 668 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 C7orf61Q8IZ16 206 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 ARRDC4Q8NCT1 418 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 DNERQ8NFT8 737 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 NSUN6Q8TEA1 469 aaKnown RBP14.45□□□□□ -0.1
CLN6-225ENST00000638144 COPS5Q92905 334 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 PHKBQ93100 1093 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 HTATIP2Q9BUP3 242 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 TM6SF1Q9BZW5 370 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 VTA1Q9NP79 307 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 PXMP2Q9NR77 195 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 GTF3C3Q9Y5Q9 886 aa14.45□□□□□ -0.1
CLN6-225ENST00000638144 V9GY48 417 aaPredicted RBP14.45□□□□□ -0.1
CLN6-225ENST00000638144 DUSP11O75319 330 aaKnown RBP14.44□□□□□ -0.1
CLN6-225ENST00000638144 ARIH2O95376 493 aa14.44□□□□□ -0.1
CLN6-225ENST00000638144 MYCLP12524 364 aaPredicted RBP14.44□□□□□ -0.1
CLN6-225ENST00000638144 PDIA3P30101 505 aaKnown RBP14.44□□□□□ -0.1
CLN6-225ENST00000638144 SEPT14Q6ZU15 432 aa14.44□□□□□ -0.1
CLN6-225ENST00000638144 TLK2Q86UE8 772 aa14.44□□□□□ -0.1
CLN6-225ENST00000638144 NID2Q14112 1375 aa14.44□□□□□ -0.1
CLN6-225ENST00000638144 H0YGN5 161 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 CTAGE5O15320 804 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 DYNC1LI2O43237 492 aaPredicted RBP14.43□□□□□ -0.1
CLN6-225ENST00000638144 EVI5O60447 810 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 NR3C2P08235 984 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 RCAN1P53805 252 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 GHRHRQ02643 423 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 TRAF1Q13077 416 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 RNF180Q86T96 592 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 FBXL16Q8N461 479 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 SMARCC2Q8TAQ2 1214 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 MPHOSPH6Q99547 160 aaKnown RBP14.43□□□□□ -0.1
CLN6-225ENST00000638144 PDCD2LQ9BRP1 358 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 WDR11Q9BZH6 1224 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 GNEQ9Y223 722 aaKnown RBP14.43□□□□□ -0.1
CLN6-225ENST00000638144 DOCK5Q9H7D0 1870 aa14.43□□□□□ -0.1
CLN6-225ENST00000638144 A0A1W2PQ45 241 aaPredicted RBP14.42□□□□□ -0.1
CLN6-225ENST00000638144 A0A1W2PQY0 241 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 MEIS2O14770 477 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 SORBS3O60504 671 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 CAPN2P17655 700 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 AK2P54819 239 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 NAPAP54920 295 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 GJA9P57773 515 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 ANAPC15P60006 121 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 PGM5Q15124 567 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 PPP2R5BQ15173 497 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 KCNA10Q16322 511 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 GNASQ5JWF2 1037 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 PGBD1Q96JS3 809 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 UPF3AQ9H1J1 476 aaKnown RBP14.42□□□□□ -0.1
CLN6-225ENST00000638144 ZMYND8Q9ULU4 1186 aaPredicted RBP14.42□□□□□ -0.1
CLN6-225ENST00000638144 PHF24Q9UPV7 400 aa14.42□□□□□ -0.1
CLN6-225ENST00000638144 TRIOBPQ9H2D6 2365 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 MYH7BA7E2Y1 1941 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 LOC102724159A0A0B4J2E5 919 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 STXBP3O00186 592 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 ADAMTS3O15072 1205 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 SYN1P17600 705 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 ACLYP53396 1101 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 EVCP57679 992 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 PWP2Q15269 919 aaKnown RBP14.41□□□□□ -0.1
CLN6-225ENST00000638144 STXBP2Q15833 593 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 NTRK3Q16288 839 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 FSCN1Q16658 493 aaKnown RBP14.41□□□□□ -0.1
CLN6-225ENST00000638144 DUSP28Q4G0W2 176 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 IQSEC1Q6DN90 963 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 KLHDC9Q8NEP7 349 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 SCFD2Q8WU76 684 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 CUL5Q93034 780 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 SLC26A6Q9BXS9 759 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 PSTPIP2Q9H939 334 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 SPC25Q9HBM1 224 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 TPCN1Q9ULQ1 816 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 ATP11BQ9Y2G3 1177 aa14.41□□□□□ -0.1
CLN6-225ENST00000638144 RANBP2P49792 3224 aaKnown RBP14.41□□□□□ -0.1
CLN6-225ENST00000638144 CCDC196A0A1B0GTZ2 297 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 RBM47A0AV96 593 aaKnown RBP14.4□□□□□ -0.1
CLN6-225ENST00000638144 B4DLN1 442 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 RGS20O76081 388 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 LARGE1O95461 756 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 ASGR1P07306 291 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 TXNP10599 105 aaKnown RBP14.4□□□□□ -0.1
CLN6-225ENST00000638144 MRPL12P52815 198 aaKnown RBP14.4□□□□□ -0.1
CLN6-225ENST00000638144 RTP1P59025 263 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 PKN1Q16512 942 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 LY6KQ17RY6 165 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 TRIM60Q495X7 471 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 PRPF38BQ5VTL8 546 aaKnown RBP14.4□□□□□ -0.1
CLN6-225ENST00000638144 CCSAPQ6IQ19 270 aaPredicted RBP14.4□□□□□ -0.1
CLN6-225ENST00000638144 OR6J1Q8NGC5 347 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 PPP1R13LQ8WUF5 828 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 IWS1Q96ST2 819 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 AP5M1Q9H0R1 490 aa14.4□□□□□ -0.1
CLN6-225ENST00000638144 SCG2P13521 617 aa14.39□□□□□ -0.11
CLN6-225ENST00000638144 CST5P28325 142 aaPredicted RBP14.39□□□□□ -0.11
CLN6-225ENST00000638144 CCND2P30279 289 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms