RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 SNAI1O95863 264 aaPredicted RBP19.76■□□□□ 0.75
CLN6-218ENST00000637223 FDPSP14324 419 aaKnown RBP19.76■□□□□ 0.75
CLN6-218ENST00000637223 ADCY7P51828 1080 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 MAP3K21Q5TCX8 1036 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 MAMDC4Q6UXC1 1216 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 MSL3Q8N5Y2 521 aaKnown RBP19.76■□□□□ 0.75
CLN6-218ENST00000637223 SAMD3Q8N6K7 520 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 DNERQ8NFT8 737 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 CCDC12Q8WUD4 166 aaPredicted RBP19.76■□□□□ 0.75
CLN6-218ENST00000637223 RMDN3Q96TC7 470 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 UNC93B1Q9H1C4 597 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 RIC8AQ9NPQ8 531 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.76■□□□□ 0.75
CLN6-218ENST00000637223 SYNGAP1Q96PV0 1343 aa19.76■□□□□ 0.75
CLN6-218ENST00000637223 PIK3CDO00329 1044 aa19.75■□□□□ 0.75
CLN6-218ENST00000637223 CCL5P13501 91 aa19.75■□□□□ 0.75
CLN6-218ENST00000637223 EIF2AK2P19525 551 aaKnown RBP19.75■□□□□ 0.75
CLN6-218ENST00000637223 CCND3P30281 292 aaPredicted RBP19.75■□□□□ 0.75
CLN6-218ENST00000637223 MRPL12P52815 198 aaKnown RBP19.75■□□□□ 0.75
CLN6-218ENST00000637223 ARHGEF16Q5VV41 709 aa19.75■□□□□ 0.75
CLN6-218ENST00000637223 TRPV1Q8NER1 839 aa19.75■□□□□ 0.75
CLN6-218ENST00000637223 CCDC148Q8NFR7 591 aa19.75■□□□□ 0.75
CLN6-218ENST00000637223 NSUN6Q8TEA1 469 aaKnown RBP19.75■□□□□ 0.75
CLN6-218ENST00000637223 LLPHQ9BRT6 129 aaKnown RBP19.75■□□□□ 0.75
CLN6-218ENST00000637223 CNPY2Q9Y2B0 182 aa19.75■□□□□ 0.75
CLN6-218ENST00000637223 MYH6P13533 1939 aa19.74■□□□□ 0.75
CLN6-218ENST00000637223 FOSBP53539 338 aa19.74■□□□□ 0.75
CLN6-218ENST00000637223 ALG1Q9BT22 464 aa19.74■□□□□ 0.75
CLN6-218ENST00000637223 C6orf50Q9HD87 102 aa19.74■□□□□ 0.75
CLN6-218ENST00000637223 PXMP2Q9NR77 195 aa19.74■□□□□ 0.75
CLN6-218ENST00000637223 TSHZ2Q9NRE2 1034 aa19.74■□□□□ 0.75
CLN6-218ENST00000637223 ZHX1Q9UKY1 873 aaPredicted RBP19.74■□□□□ 0.75
CLN6-218ENST00000637223 ESYT2A0FGR8 921 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 ADAMTS3O15072 1205 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 CYBAP13498 195 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 CNGA1P29973 690 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 NLRP5P59047 1200 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 PDE4DQ08499 809 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 EEPD1Q7L9B9 569 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 WASF1Q92558 559 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 MPHOSPH6Q99547 160 aaKnown RBP19.73■□□□□ 0.75
CLN6-218ENST00000637223 ZMYND12Q9H0C1 365 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.73■□□□□ 0.754e-8■■■■□ 25.2
CLN6-218ENST00000637223 RNF208Q9H0X6 261 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 HMX1Q9NP08 348 aaPredicted RBP19.73■□□□□ 0.75
CLN6-218ENST00000637223 SH3GLB2Q9NR46 395 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 GJB4Q9NTQ9 266 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 TMEM260Q9NX78 707 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 RPTORQ8N122 1335 aa19.73■□□□□ 0.75
CLN6-218ENST00000637223 EDNRBP24530 442 aa19.72■□□□□ 0.75
CLN6-218ENST00000637223 ACVR2BQ13705 512 aa19.72■□□□□ 0.75
CLN6-218ENST00000637223 FBXO16Q8IX29 292 aaPredicted RBP19.72■□□□□ 0.75
CLN6-218ENST00000637223 MORC4Q8TE76 937 aa19.72■□□□□ 0.75
CLN6-218ENST00000637223 PGBD1Q96JS3 809 aa19.72■□□□□ 0.75
CLN6-218ENST00000637223 PDCD2LQ9BRP1 358 aa19.72■□□□□ 0.75
CLN6-218ENST00000637223 GLT8D2Q9H1C3 349 aa19.72■□□□□ 0.75
CLN6-218ENST00000637223 KCNJ14Q9UNX9 436 aa19.72■□□□□ 0.75
CLN6-218ENST00000637223 LCTP09848 1927 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 ZNFX1Q9P2E3 1918 aaKnown RBP19.71■□□□□ 0.75
CLN6-218ENST00000637223 LOC102724159A0A0B4J2E5 919 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 SPDYE3A6NKU9 549 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 B4DLN1 442 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 ZNF865P0CJ78 1059 aaPredicted RBP19.71■□□□□ 0.75
CLN6-218ENST00000637223 MYCLP12524 364 aaPredicted RBP19.71■□□□□ 0.75
CLN6-218ENST00000637223 GNA11P29992 359 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 PGM5Q15124 567 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 PWP2Q15269 919 aaKnown RBP19.71■□□□□ 0.75
CLN6-218ENST00000637223 JAKMIP3Q5VZ66 844 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 IL31RAQ8NI17 732 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 RASGRP4Q8TDF6 673 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 KATNBL1Q9H079 304 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 ABHD16BQ9H3Z7 469 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 NRBP1Q9UHY1 535 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 PCDHA6Q9UN73 950 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 PCDHA8Q9Y5H6 950 aa19.71■□□□□ 0.75
CLN6-218ENST00000637223 NR3C2P08235 984 aa19.7■□□□□ 0.74
CLN6-218ENST00000637223 XBP1P17861 261 aa19.7■□□□□ 0.74
CLN6-218ENST00000637223 CLK2P49760 499 aaKnown RBP19.7■□□□□ 0.74
CLN6-218ENST00000637223 HMGN5P82970 282 aaKnown RBP19.7■□□□□ 0.74
CLN6-218ENST00000637223 REXO1Q8N1G1 1221 aaKnown RBP19.7■□□□□ 0.74
CLN6-218ENST00000637223 SNX21Q969T3 373 aa19.7■□□□□ 0.74
CLN6-218ENST00000637223 ZFP91Q96JP5 570 aaPredicted RBP19.7■□□□□ 0.74
CLN6-218ENST00000637223 IWS1Q96ST2 819 aa19.7■□□□□ 0.74
CLN6-218ENST00000637223 PLXNA1Q9UIW2 1896 aa19.7■□□□□ 0.74
CLN6-218ENST00000637223 K7ELQ4 463 aaPredicted RBP19.69■□□□□ 0.74
CLN6-218ENST00000637223 STXBP2Q15833 593 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 ANO1Q5XXA6 986 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 FAM184AQ8NB25 1140 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 BICD2Q8TD16 824 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 DEFB118Q96PH6 123 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 ANO3Q9BYT9 981 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 PRO3102Q9H379 93 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 VTA1Q9NP79 307 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 PAK6Q9NQU5 681 aaPredicted RBP19.69■□□□□ 0.74
CLN6-218ENST00000637223 PDGFCQ9NRA1 345 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 PCDHA4Q9UN74 947 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 FRMPD4Q14CM0 1322 aa19.69■□□□□ 0.74
CLN6-218ENST00000637223 SEPT4O43236 478 aa19.68■□□□□ 0.74
CLN6-218ENST00000637223 CCND2P30279 289 aa19.68■□□□□ 0.74
CLN6-218ENST00000637223 AP3B2Q13367 1082 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms