RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 LZTS2Q9BRK4 669 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 LAMA2P24043 3122 aaKnown RBP21.2■□□□□ 0.98
CLN6-210ENST00000635747 SZT2Q5T011 3432 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 CCDC69A6NI79 296 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 TLR3O15455 904 aaKnown RBP21.19■□□□□ 0.98
CLN6-210ENST00000635747 CALM1P0DP23 149 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 CALM2P0DP24 149 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 CALM3P0DP25 149 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 RAG1P15918 1043 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 SMARCA1P28370 1054 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 HSD17B4P51659 736 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 TTLL4Q14679 1199 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 STXBP2Q15833 593 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 ARHGEF16Q5VV41 709 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 GPR153Q6NV75 609 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 HOMER1Q86YM7 354 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 BADQ92934 168 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 PIGSQ96S52 555 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 POLR3EQ9NVU0 708 aa21.19■□□□□ 0.98
CLN6-210ENST00000635747 LCTP09848 1927 aa21.18■□□□□ 0.98
CLN6-210ENST00000635747 CXCL17Q6UXB2 119 aa21.18■□□□□ 0.98
CLN6-210ENST00000635747 OR6J1Q8NGC5 347 aa21.18■□□□□ 0.98
CLN6-210ENST00000635747 SH2B2O14492 632 aaPredicted RBP21.17■□□□□ 0.98
CLN6-210ENST00000635747 CYTH3O43739 400 aa21.17■□□□□ 0.98
CLN6-210ENST00000635747 KPNA6O60684 536 aa21.17■□□□□ 0.98
CLN6-210ENST00000635747 PPP1R11O60927 126 aaPredicted RBP21.17■□□□□ 0.98
CLN6-210ENST00000635747 TXNP10599 105 aaKnown RBP21.17■□□□□ 0.98
CLN6-210ENST00000635747 ITGA7Q13683 1181 aa21.17■□□□□ 0.98
CLN6-210ENST00000635747 SLC43A3Q8NBI5 491 aa21.17■□□□□ 0.98
CLN6-210ENST00000635747 SPZ1Q9BXG8 430 aa21.17■□□□□ 0.98
CLN6-210ENST00000635747 GPHNQ9NQX3 736 aaPredicted RBP21.17■□□□□ 0.98
CLN6-210ENST00000635747 COL20A1Q9P218 1284 aa21.17■□□□□ 0.98
CLN6-210ENST00000635747 LRRC37A2A6NM11 1700 aa21.17■□□□□ 0.98
CLN6-210ENST00000635747 EIF3JO75822 258 aaKnown RBP21.16■□□□□ 0.98
CLN6-210ENST00000635747 KRT32Q14532 448 aa21.16■□□□□ 0.98
CLN6-210ENST00000635747 TSGA10IPQ3SY00 556 aa21.16■□□□□ 0.98
CLN6-210ENST00000635747 TMEM63BQ5T3F8 832 aa21.16■□□□□ 0.98
CLN6-210ENST00000635747 RRP36Q96EU6 259 aaKnown RBP21.16■□□□□ 0.98
CLN6-210ENST00000635747 NEK1Q96PY6 1258 aa21.16■□□□□ 0.98
CLN6-210ENST00000635747 PXMP2Q9NR77 195 aa21.16■□□□□ 0.98
CLN6-210ENST00000635747 SLC12A7Q9Y666 1083 aa21.16■□□□□ 0.98
CLN6-210ENST00000635747 GCOM1H8Y6P7 765 aaPredicted RBP21.15■□□□□ 0.98
CLN6-210ENST00000635747 SOX1O00570 391 aaPredicted RBP21.15■□□□□ 0.98
CLN6-210ENST00000635747 OPLAHO14841 1288 aa21.15■□□□□ 0.98
CLN6-210ENST00000635747 TIMP1P01033 207 aa21.15■□□□□ 0.98
CLN6-210ENST00000635747 NR3C2P08235 984 aa21.15■□□□□ 0.98
CLN6-210ENST00000635747 POLR2MP0CAP2 368 aa21.15■□□□□ 0.98
CLN6-210ENST00000635747 SLC35G1Q2M3R5 365 aa21.15■□□□□ 0.98
CLN6-210ENST00000635747 SYNE3Q6ZMZ3 975 aa21.15■□□□□ 0.98
CLN6-210ENST00000635747 FAM126BQ8IXS8 530 aa21.15■□□□□ 0.98
CLN6-210ENST00000635747 SEC63Q9UGP8 760 aaKnown RBP21.15■□□□□ 0.98
CLN6-210ENST00000635747 TBX21Q9UL17 535 aa21.15■□□□□ 0.98
CLN6-210ENST00000635747 A6NJR5 290 aa21.14■□□□□ 0.97
CLN6-210ENST00000635747 EIF2AK2P19525 551 aaKnown RBP21.14■□□□□ 0.97
CLN6-210ENST00000635747 CCDC62Q6P9F0 684 aa21.14■□□□□ 0.97
CLN6-210ENST00000635747 SEPT14Q6ZU15 432 aa21.14■□□□□ 0.97
CLN6-210ENST00000635747 SGMS1Q86VZ5 419 aa21.14■□□□□ 0.97
CLN6-210ENST00000635747 LRCH3Q96II8 777 aa21.14■□□□□ 0.97
CLN6-210ENST00000635747 MYL10Q9BUA6 226 aa21.14■□□□□ 0.97
CLN6-210ENST00000635747 MYH6P13533 1939 aa21.14■□□□□ 0.97
CLN6-210ENST00000635747 CD4P01730 458 aa21.13■□□□□ 0.97
CLN6-210ENST00000635747 HMGB1P09429 215 aaKnown RBP21.13■□□□□ 0.97
CLN6-210ENST00000635747 PTGS1P23219 599 aa21.13■□□□□ 0.97
CLN6-210ENST00000635747 ITGB8P26012 769 aa21.13■□□□□ 0.97
CLN6-210ENST00000635747 FPGSQ05932 587 aa21.13■□□□□ 0.97
CLN6-210ENST00000635747 KCNV1Q6PIU1 500 aa21.13■□□□□ 0.97
CLN6-210ENST00000635747 PDCD2LQ9BRP1 358 aa21.13■□□□□ 0.97
CLN6-210ENST00000635747 MTG1Q9BT17 334 aaPredicted RBP21.13■□□□□ 0.97
CLN6-210ENST00000635747 GH1P01241 217 aa21.12■□□□□ 0.97
CLN6-210ENST00000635747 MYL3P08590 195 aa21.12■□□□□ 0.97
CLN6-210ENST00000635747 PURAQ00577 322 aaKnown RBP21.12■□□□□ 0.97
CLN6-210ENST00000635747 MFSD5Q6N075 450 aa21.12■□□□□ 0.97
CLN6-210ENST00000635747 DHX32Q7L7V1 743 aaKnown RBP21.12■□□□□ 0.97
CLN6-210ENST00000635747 LTBP2Q14767 1821 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 GRIN2DO15399 1336 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 ARIH2O95376 493 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 HOXA13P31271 388 aaPredicted RBP21.11■□□□□ 0.97
CLN6-210ENST00000635747 SHHQ15465 462 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 VSIG10LQ86VR7 867 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 TMEM199Q8N511 208 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 FANCBQ8NB91 859 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 PIBF1Q8WXW3 757 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 COPS5Q92905 334 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 CUL5Q93034 780 aa21.11■□□□□ 0.97
CLN6-210ENST00000635747 SUPT20HL2P0C7V6 817 aa21.1■□□□□ 0.97
CLN6-210ENST00000635747 CCND2P30279 289 aa21.1■□□□□ 0.97
CLN6-210ENST00000635747 EXOSC10Q01780 885 aaKnown RBP21.1■□□□□ 0.97
CLN6-210ENST00000635747 PPIGQ13427 754 aaKnown RBP eCLIP21.1■□□□□ 0.977e-7■□□□□ 9.4
CLN6-210ENST00000635747 LY6KQ17RY6 165 aa21.1■□□□□ 0.97
CLN6-210ENST00000635747 ERICH6BQ5W0A0 696 aa21.1■□□□□ 0.97
CLN6-210ENST00000635747 SRBD1Q8N5C6 995 aaKnown RBP21.1■□□□□ 0.97
CLN6-210ENST00000635747 LRRC2Q9BYS8 371 aa21.1■□□□□ 0.97
CLN6-210ENST00000635747 MRVI1Q9Y6F6 885 aa21.1■□□□□ 0.97
CLN6-210ENST00000635747 STAM2O75886 525 aa21.09■□□□□ 0.97
CLN6-210ENST00000635747 REC8O95072 547 aa21.09■□□□□ 0.97
CLN6-210ENST00000635747 TGFB3P10600 412 aa21.09■□□□□ 0.97
CLN6-210ENST00000635747 MYCLP12524 364 aaPredicted RBP21.09■□□□□ 0.97
CLN6-210ENST00000635747 PSMC6P62333 389 aa21.09■□□□□ 0.97
CLN6-210ENST00000635747 LAMC2Q13753 1193 aa21.09■□□□□ 0.97
CLN6-210ENST00000635747 PGM5Q15124 567 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms