RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FCGRTP55899 365 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 GHRHRQ02643 423 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 AP3B2Q13367 1082 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 KIF22Q14807 665 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 KRT25Q7Z3Z0 450 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 NOSTRINQ8IVI9 506 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 TEX2Q8IWB9 1127 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 PURBQ96QR8 312 aaKnown RBP16.49■□□□□ 0.23
LINC00339-208ENST00000634934 COL20A1Q9P218 1284 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 ZDHHC9Q9Y397 364 aa16.49■□□□□ 0.23
LINC00339-208ENST00000634934 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
LINC00339-208ENST00000634934 F13A1P00488 732 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 PTPREP23469 700 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 U2AF2P26368 475 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00339-208ENST00000634934 ADORA2AP29274 412 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 CNTN2Q02246 1040 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 NONOQ15233 471 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00339-208ENST00000634934 MCTP2Q6DN12 878 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00339-208ENST00000634934 OTOP1Q7RTM1 612 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 CTU1Q7Z7A3 348 aaKnown RBP16.48■□□□□ 0.23
LINC00339-208ENST00000634934 ABRAQ8N0Z2 381 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 TNFRSF25Q93038 417 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 TRIM47Q96LD4 638 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 ANO3Q9BYT9 981 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 MAF1Q9H063 256 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 TRIM17Q9Y577 477 aa16.48■□□□□ 0.23
LINC00339-208ENST00000634934 FAM205CA6NFA0 338 aa16.47■□□□□ 0.23
LINC00339-208ENST00000634934 SLC15A5A6NIM6 579 aa16.47■□□□□ 0.23
LINC00339-208ENST00000634934 RESTQ13127 1097 aa16.47■□□□□ 0.23
LINC00339-208ENST00000634934 EARS2Q5JPH6 523 aaKnown RBP16.47■□□□□ 0.23
LINC00339-208ENST00000634934 RMDN3Q96TC7 470 aa16.47■□□□□ 0.23
LINC00339-208ENST00000634934 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
LINC00339-208ENST00000634934 EHMT1Q9H9B1 1298 aa16.47■□□□□ 0.23
LINC00339-208ENST00000634934 EIF2AK2P19525 551 aaKnown RBP16.46■□□□□ 0.23
LINC00339-208ENST00000634934 CLCN1P35523 988 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 ZNF445P59923 1031 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 UBXN2AP68543 259 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 GRB14Q14449 540 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 INF2Q27J81 1249 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 ARHGEF16Q5VV41 709 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 DPP9Q86TI2 863 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 TBCKQ8TEA7 893 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 MCOLN1Q9GZU1 580 aa16.46■□□□□ 0.23
LINC00339-208ENST00000634934 ATP2B1P20020 1258 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 FOXD4L6Q3SYB3 417 aaPredicted RBP16.45■□□□□ 0.22
LINC00339-208ENST00000634934 FOXD4L3Q6VB84 417 aaPredicted RBP16.45■□□□□ 0.22
LINC00339-208ENST00000634934 FAM133AQ8N9E0 248 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 DNAJC25-GNG10A0A024R161 153 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 COBLO75128 1261 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 MORN1Q5T089 497 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 FAM173BQ6P4H8 233 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 NSUN6Q8TEA1 469 aaKnown RBP16.45■□□□□ 0.22
LINC00339-208ENST00000634934 NUDT12Q9BQG2 462 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 PXMP2Q9NR77 195 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 SLC5A4Q9NY91 659 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 ADD3Q9UEY8 706 aaKnown RBP16.45■□□□□ 0.22
LINC00339-208ENST00000634934 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
LINC00339-208ENST00000634934 DOCK3Q8IZD9 2030 aa16.45■□□□□ 0.22
LINC00339-208ENST00000634934 BRCA2P51587 3418 aa16.44■□□□□ 0.22
LINC00339-208ENST00000634934 PLXNB2O15031 1838 aa16.44■□□□□ 0.22
LINC00339-208ENST00000634934 RBBP6Q7Z6E9 1792 aaKnown RBP16.44■□□□□ 0.22
LINC00339-208ENST00000634934 SOWAHBA6NEL2 793 aa16.44■□□□□ 0.22
LINC00339-208ENST00000634934 ARHGAP4P98171 946 aa16.44■□□□□ 0.22
LINC00339-208ENST00000634934 MAP2K5Q13163 448 aa16.44■□□□□ 0.22
LINC00339-208ENST00000634934 TNS4Q8IZW8 715 aa16.44■□□□□ 0.22
LINC00339-208ENST00000634934 DNERQ8NFT8 737 aa16.44■□□□□ 0.22
LINC00339-208ENST00000634934 SOCS4Q8WXH5 440 aa16.44■□□□□ 0.22
LINC00339-208ENST00000634934 MYCLP12524 364 aaPredicted RBP16.43■□□□□ 0.22
LINC00339-208ENST00000634934 CYP2B6P20813 491 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 SREBF1P36956 1147 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 RGS2P41220 211 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 ALDH5A1P51649 535 aaPredicted RBP16.43■□□□□ 0.22
LINC00339-208ENST00000634934 PRKCZQ05513 592 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 ZNF792Q3KQV3 632 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 MYSM1Q5VVJ2 828 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 NEK8Q86SG6 692 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 IL31RAQ8NI17 732 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 PPP1R9BQ96SB3 815 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 GJD2Q9UKL4 321 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 GABRQQ9UN88 632 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 RPTORQ8N122 1335 aa16.43■□□□□ 0.22
LINC00339-208ENST00000634934 NR3C2P08235 984 aa16.42■□□□□ 0.22
LINC00339-208ENST00000634934 ZNF76P36508 570 aa16.42■□□□□ 0.22
LINC00339-208ENST00000634934 ARHGEF6Q15052 776 aa16.42■□□□□ 0.22
LINC00339-208ENST00000634934 PGM5Q15124 567 aa16.42■□□□□ 0.22
LINC00339-208ENST00000634934 ZFP91Q96JP5 570 aaPredicted RBP16.42■□□□□ 0.22
LINC00339-208ENST00000634934 FGD4Q96M96 766 aa16.42■□□□□ 0.22
LINC00339-208ENST00000634934 PTPN22Q9Y2R2 807 aa16.42■□□□□ 0.22
LINC00339-208ENST00000634934 ATP6V1DQ9Y5K8 247 aa16.42■□□□□ 0.22
LINC00339-208ENST00000634934 DDX49Q9Y6V7 483 aaKnown RBP16.42■□□□□ 0.22
LINC00339-208ENST00000634934 ASTN1O14525 1302 aa16.42■□□□□ 0.22
LINC00339-208ENST00000634934 FRMPD4Q14CM0 1322 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 B4DLN1 442 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 HOXD10P28358 340 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 CCND2P30279 289 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms