RNA–Protein interactions for RNA: ENST00000629252.2

UBE3A-218, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 1,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-218ENST00000629252 RETREG2Q8NC44 543 aa23.91■■□□□ 1.42
UBE3A-218ENST00000629252 VWCEQ96DN2 955 aa23.91■■□□□ 1.42
UBE3A-218ENST00000629252 UBA5Q9GZZ9 404 aa23.91■■□□□ 1.42
UBE3A-218ENST00000629252 ZMYM6O95789 1325 aa23.9■■□□□ 1.42
UBE3A-218ENST00000629252 NEDD4P46934 1319 aa23.9■■□□□ 1.42
UBE3A-218ENST00000629252 WDR19Q8NEZ3 1342 aa23.9■■□□□ 1.42
UBE3A-218ENST00000629252 B4DLN1 442 aa23.9■■□□□ 1.42
UBE3A-218ENST00000629252 NKRFO15226 690 aaKnown RBP eCLIP23.9■■□□□ 1.422e-13■■□□□ 11.6
UBE3A-218ENST00000629252 CA3P07451 260 aa23.9■■□□□ 1.42
UBE3A-218ENST00000629252 MRPL12P52815 198 aaKnown RBP23.9■■□□□ 1.42
UBE3A-218ENST00000629252 TMEM67Q5HYA8 995 aa23.9■■□□□ 1.42
UBE3A-218ENST00000629252 ESR2Q92731 530 aa23.9■■□□□ 1.42
UBE3A-218ENST00000629252 TTC14Q96N46 770 aa23.9■■□□□ 1.42
UBE3A-218ENST00000629252 TSPYL2Q9H2G4 693 aaPredicted RBP23.9■■□□□ 1.42
UBE3A-218ENST00000629252 CHD7Q9P2D1 2997 aa23.89■■□□□ 1.42
UBE3A-218ENST00000629252 SCN10AQ9Y5Y9 1956 aa23.89■■□□□ 1.42
UBE3A-218ENST00000629252 DNERQ8NFT8 737 aa23.89■■□□□ 1.41
UBE3A-218ENST00000629252 RNF41Q9H4P4 317 aaPredicted RBP23.89■■□□□ 1.41
UBE3A-218ENST00000629252 TANC1Q9C0D5 1861 aa23.88■■□□□ 1.41
UBE3A-218ENST00000629252 RFXAPO00287 272 aa23.88■■□□□ 1.41
UBE3A-218ENST00000629252 DHX16O60231 1041 aaKnown RBP23.88■■□□□ 1.41
UBE3A-218ENST00000629252 ARIH2O95376 493 aa23.88■■□□□ 1.41
UBE3A-218ENST00000629252 EDNRBP24530 442 aa23.88■■□□□ 1.41
UBE3A-218ENST00000629252 CDC37Q16543 378 aaPredicted RBP23.88■■□□□ 1.41
UBE3A-218ENST00000629252 GPATCH4Q5T3I0 446 aaKnown RBP23.88■■□□□ 1.41
UBE3A-218ENST00000629252 B4GALNT3Q6L9W6 998 aa23.88■■□□□ 1.41
UBE3A-218ENST00000629252 NFRKBQ6P4R8 1299 aa23.88■■□□□ 1.41
UBE3A-218ENST00000629252 SEPT14Q6ZU15 432 aa23.88■■□□□ 1.41
UBE3A-218ENST00000629252 CHST3Q7LGC8 479 aa23.88■■□□□ 1.41
UBE3A-218ENST00000629252 UHRF1Q96T88 793 aaPredicted RBP23.88■■□□□ 1.41
UBE3A-218ENST00000629252 A6NJR5 290 aa23.87■■□□□ 1.41
UBE3A-218ENST00000629252 KPNA6O60684 536 aa23.87■■□□□ 1.41
UBE3A-218ENST00000629252 SNHG28P0DPA3 235 aa23.87■■□□□ 1.41
UBE3A-218ENST00000629252 PCP11498 1178 aaKnown RBP23.87■■□□□ 1.41
UBE3A-218ENST00000629252 MFAP1P55081 439 aaKnown RBP23.87■■□□□ 1.41
UBE3A-218ENST00000629252 ZNF213O14771 459 aa23.86■■□□□ 1.41
UBE3A-218ENST00000629252 IQCF3P0C7M6 154 aa23.86■■□□□ 1.41
UBE3A-218ENST00000629252 RFC2P35250 354 aa23.86■■□□□ 1.41
UBE3A-218ENST00000629252 BFSP2Q13515 415 aa23.86■■□□□ 1.41
UBE3A-218ENST00000629252 HDAC1Q13547 482 aaPredicted RBP23.86■■□□□ 1.41
UBE3A-218ENST00000629252 PNMA1Q8ND90 353 aa23.86■■□□□ 1.41
UBE3A-218ENST00000629252 AFG1LQ8WV93 481 aa23.86■■□□□ 1.41
UBE3A-218ENST00000629252 SLC9A7Q96T83 725 aa23.86■■□□□ 1.41
UBE3A-218ENST00000629252 KAT14Q9H8E8 782 aa23.86■■□□□ 1.41
UBE3A-218ENST00000629252 GTPBP6O43824 516 aaPredicted RBP23.85■■□□□ 1.41
UBE3A-218ENST00000629252 KDM4AO75164 1064 aa23.85■■□□□ 1.41
UBE3A-218ENST00000629252 TFF2Q03403 129 aa23.85■■□□□ 1.41
UBE3A-218ENST00000629252 PTGISQ16647 500 aa23.85■■□□□ 1.41
UBE3A-218ENST00000629252 LY6KQ17RY6 165 aa23.85■■□□□ 1.41
UBE3A-218ENST00000629252 IQCA1Q86XH1 822 aa23.85■■□□□ 1.41
UBE3A-218ENST00000629252 ARNTL2Q8WYA1 636 aa23.85■■□□□ 1.41
UBE3A-218ENST00000629252 TBC1D5Q92609 795 aa23.85■■□□□ 1.41
UBE3A-218ENST00000629252 TCF20Q9UGU0 1960 aaKnown RBP23.84■■□□□ 1.41
UBE3A-218ENST00000629252 PITPNM1O00562 1244 aa23.84■■□□□ 1.41
UBE3A-218ENST00000629252 SDSP20132 328 aa23.84■■□□□ 1.41
UBE3A-218ENST00000629252 COL9A1P20849 921 aa23.84■■□□□ 1.41
UBE3A-218ENST00000629252 CWC27Q6UX04 472 aaKnown RBP23.84■■□□□ 1.41
UBE3A-218ENST00000629252 NECAB3Q96P71 396 aaPredicted RBP23.84■■□□□ 1.41
UBE3A-218ENST00000629252 TAAR1Q96RJ0 339 aa23.84■■□□□ 1.41
UBE3A-218ENST00000629252 VAT1LQ9HCJ6 419 aa23.84■■□□□ 1.41
UBE3A-218ENST00000629252 DIAPH3Q9NSV4 1193 aa23.84■■□□□ 1.41
UBE3A-218ENST00000629252 ABCB11O95342 1321 aa23.84■■□□□ 1.41
UBE3A-218ENST00000629252 LAMA4Q16363 1823 aa23.83■■□□□ 1.41
UBE3A-218ENST00000629252 B4E1Z4 1266 aa23.83■■□□□ 1.41
UBE3A-218ENST00000629252 MMP3P08254 477 aa23.83■■□□□ 1.41
UBE3A-218ENST00000629252 KCNJ6P48051 423 aa23.83■■□□□ 1.41
UBE3A-218ENST00000629252 PTPN11Q06124 597 aaPredicted RBP23.83■■□□□ 1.41
UBE3A-218ENST00000629252 KRT40Q6A162 431 aa23.83■■□□□ 1.41
UBE3A-218ENST00000629252 DGKHQ86XP1 1220 aa23.83■■□□□ 1.41
UBE3A-218ENST00000629252 ADGRF4Q8IZF3 695 aa23.83■■□□□ 1.41
UBE3A-218ENST00000629252 CCDC155Q8N6L0 562 aa23.83■■□□□ 1.41
UBE3A-218ENST00000629252 MYH6P13533 1939 aa23.82■■□□□ 1.4
UBE3A-218ENST00000629252 TRIP12Q14669 1992 aaPredicted RBP23.82■■□□□ 1.4
UBE3A-218ENST00000629252 EPOPA6NHQ4 379 aa23.82■■□□□ 1.4
UBE3A-218ENST00000629252 KIF28PB7ZC32 967 aa23.82■■□□□ 1.4
UBE3A-218ENST00000629252 GH1P01241 217 aa23.82■■□□□ 1.4
UBE3A-218ENST00000629252 EIF2AK2P19525 551 aaKnown RBP23.82■■□□□ 1.4
UBE3A-218ENST00000629252 HERC6Q8IVU3 1022 aa23.82■■□□□ 1.4
UBE3A-218ENST00000629252 SYTL5Q8TDW5 730 aaPredicted RBP23.82■■□□□ 1.4
UBE3A-218ENST00000629252 NSUN6Q8TEA1 469 aaKnown RBP23.82■■□□□ 1.4
UBE3A-218ENST00000629252 RMDN3Q96TC7 470 aa23.82■■□□□ 1.4
UBE3A-218ENST00000629252 COL20A1Q9P218 1284 aa23.82■■□□□ 1.4
UBE3A-218ENST00000629252 QRICH1Q2TAL8 776 aa23.81■■□□□ 1.4
UBE3A-218ENST00000629252 ARHGEF16Q5VV41 709 aa23.81■■□□□ 1.4
UBE3A-218ENST00000629252 GDF6Q6KF10 455 aaPredicted RBP23.81■■□□□ 1.4
UBE3A-218ENST00000629252 CCDC62Q6P9F0 684 aa23.81■■□□□ 1.4
UBE3A-218ENST00000629252 RGS22Q8NE09 1264 aa23.81■■□□□ 1.4
UBE3A-218ENST00000629252 ALG1Q9BT22 464 aa23.81■■□□□ 1.4
UBE3A-218ENST00000629252 PRRC2BQ5JSZ5 2229 aaKnown RBP23.81■■□□□ 1.4
UBE3A-218ENST00000629252 TET1Q8NFU7 2136 aa23.81■■□□□ 1.4
UBE3A-218ENST00000629252 ARHGEF15O94989 841 aa23.8■■□□□ 1.4
UBE3A-218ENST00000629252 KCNQ1P51787 676 aa23.8■■□□□ 1.4
UBE3A-218ENST00000629252 TAP1Q03518 808 aa23.8■■□□□ 1.4
UBE3A-218ENST00000629252 ARHGAP1Q07960 439 aa23.8■■□□□ 1.4
UBE3A-218ENST00000629252 STXBP2Q15833 593 aa23.8■■□□□ 1.4
UBE3A-218ENST00000629252 ASPRV1Q53RT3 343 aa23.8■■□□□ 1.4
UBE3A-218ENST00000629252 CCDC178Q5BJE1 867 aa23.8■■□□□ 1.4
UBE3A-218ENST00000629252 TMCO2Q7Z6W1 182 aaPredicted RBP23.8■■□□□ 1.4
UBE3A-218ENST00000629252 FBXO11Q86XK2 927 aa23.8■■□□□ 1.4
UBE3A-218ENST00000629252 TICAM2Q86XR7 235 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 278.4 ms