RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GTF3C2Q8WUA4 911 aaPredicted RBP14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 BARHL2Q9NY43 387 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 COL4A5P29400 1685 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 SARM1Q6SZW1 724 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 NEK8Q86SG6 692 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 MAP3K14Q99558 947 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 BTBD19C9JJ37 291 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 AOC2O75106 756 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 ERCC3P19447 782 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 ZNF165P49910 485 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 MYSM1Q5VVJ2 828 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 DTHD1Q6ZMT9 781 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 SAPCD2Q86UD0 394 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 TBCKQ8TEA7 893 aa14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 NAP1L4Q99733 375 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.04□□□□□ -0.16
SYNGAP1-207ENST00000628646 VWA3AA6NCI4 1184 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 BRDTQ58F21 947 aaPredicted RBP14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 ERMNQ8TAM6 284 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 RAET1EQ8TD07 263 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 ANKS1AQ92625 1134 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 MLXIPQ9HAP2 919 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 CNTNAP5Q8WYK1 1306 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 KIF3CO14782 793 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 MMP1P03956 469 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 NDUFA8P51970 172 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 MCTP2Q6DN12 878 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 CALML4Q96GE6 196 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 SCLT1Q96NL6 688 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 ANO3Q9BYT9 981 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 BMP2KQ9NSY1 1161 aaPredicted RBP14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 VWA5AO00534 786 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 SPTLC2O15270 562 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 IBSPP21815 317 aaPredicted RBP14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 COPB2P35606 906 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 CCDC144BQ3MJ40 725 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 CATSPERGQ6ZRH7 1159 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 TMEM260Q9NX78 707 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 TSKSQ9UJT2 592 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 RABGAP1Q9Y3P9 1069 aa14.03□□□□□ -0.16
SYNGAP1-207ENST00000628646 SLC25A27O95847 323 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 NOL9Q5SY16 702 aaKnown RBP14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 MRPS27Q92552 414 aaKnown RBP14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 SPATC1LQ9H0A9 340 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 SMTNL1A8MU46 457 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 YEATS4O95619 227 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 PTGS1P23219 599 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 PTPAQ15257 358 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 CALCRLQ16602 461 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 SPC24Q8NBT2 197 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 SPC25Q9HBM1 224 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 DACH1Q9UI36 760 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 PCDHA6Q9UN73 950 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 PCDHA8Q9Y5H6 950 aa14.02□□□□□ -0.16
SYNGAP1-207ENST00000628646 ERCC4Q92889 916 aaPredicted RBP14.02□□□□□ -0.17
SYNGAP1-207ENST00000628646 NEMFO60524 1076 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 ICAM1P05362 532 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 CDC25BP30305 580 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 NSUN6Q8TEA1 469 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 PLIN2Q99541 437 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 ZNF112Q9UJU3 913 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 STK36Q9NRP7 1315 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 GAS7O60861 476 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 GTF2F1P35269 517 aaKnown RBP eCLIP14.01□□□□□ -0.172e-6■■■■■ 29.6
SYNGAP1-207ENST00000628646 STX1AQ16623 288 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 ANO1Q5XXA6 986 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 EFCC1Q9HA90 598 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 FAM237AA0A1B0GTK4 181 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 TBC1D8O95759 1140 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 KRT79Q5XKE5 535 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 NCAPH2Q6IBW4 605 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 OXER1Q8TDS5 423 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 DDX25Q9UHL0 483 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 KIAA1551Q9HCM1 1747 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 A0A1B0GVL5 298 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 NOC3LQ8WTT2 800 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 BRI3BPQ8WY22 251 aa14.01□□□□□ -0.17
SYNGAP1-207ENST00000628646 UQCRHLA0A096LP55 91 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 PEX10O60683 326 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 UQCRHP07919 91 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 CCND2P30279 289 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 FCGRTP55899 365 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 LRMPQ12912 555 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 CST9Q5W186 159 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 SHISA4Q96DD7 197 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 NUDT12Q9BQG2 462 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 SH3GLB2Q9NR46 395 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 HPSEQ9Y251 543 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 ITGBL1O95965 494 aaPredicted RBP14□□□□□ -0.17
SYNGAP1-207ENST00000628646 PGK2P07205 417 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 U2AF2P26368 475 aaKnown RBP eCLIP14□□□□□ -0.17
SYNGAP1-207ENST00000628646 LAMB1P07942 1786 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 RPS6P62753 249 aaKnown RBP14□□□□□ -0.17
SYNGAP1-207ENST00000628646 ERVK-9P63128 1117 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 ERVK-24P63145 666 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 TPD52L1Q16890 204 aaPredicted RBP14□□□□□ -0.17
SYNGAP1-207ENST00000628646 CHST13Q8NET6 341 aa14□□□□□ -0.17
SYNGAP1-207ENST00000628646 FOXP1Q9H334 677 aaPredicted RBP14□□□□□ -0.17
SYNGAP1-207ENST00000628646 MYH6P13533 1939 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms