RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 PSMD2Q13200 908 aa18.35■□□□□ 0.53
LDB3-208ENST00000623007 FAM83BQ5T0W9 1011 aa18.35■□□□□ 0.53
LDB3-208ENST00000623007 MIGA2Q7L4E1 593 aa18.35■□□□□ 0.53
LDB3-208ENST00000623007 PRPF38AQ8NAV1 312 aaKnown RBP18.35■□□□□ 0.53
LDB3-208ENST00000623007 ACER1Q8TDN7 264 aa18.35■□□□□ 0.53
LDB3-208ENST00000623007 NUP88Q99567 741 aaPredicted RBP18.35■□□□□ 0.53
LDB3-208ENST00000623007 MTRQ99707 1265 aa18.35■□□□□ 0.53
LDB3-208ENST00000623007 TRIM9Q9C026 710 aa18.35■□□□□ 0.53
LDB3-208ENST00000623007 MYH7BA7E2Y1 1941 aa18.35■□□□□ 0.53
LDB3-208ENST00000623007 DICER1Q9UPY3 1922 aaKnown RBP18.35■□□□□ 0.53
LDB3-208ENST00000623007 USP17L15C9J2P7 530 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 USP17L13C9JLJ4 530 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 USP17L11C9JVI0 530 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 USP17L18D6R9N7 530 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 USP17L22D6RA61 530 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 USP17L17D6RBQ6 530 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 USP17L19D6RCP7 530 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 USP17L20D6RJB6 530 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 GCOM1H8Y6P7 765 aaPredicted RBP18.34■□□□□ 0.53
LDB3-208ENST00000623007 POLR2MP0CAP2 368 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 LMNB1P20700 586 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 SFPQP23246 707 aaKnown RBP eCLIP18.34■□□□□ 0.53
LDB3-208ENST00000623007 USP17L24Q0WX57 530 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 USP17L6PQ6QN14 398 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 MCF2L2Q86YR7 1114 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 GIMAP8Q8ND71 665 aaPredicted RBP18.34■□□□□ 0.53
LDB3-208ENST00000623007 SNX29Q8TEQ0 813 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 LARP4BQ92615 738 aaKnown RBP18.34■□□□□ 0.53
LDB3-208ENST00000623007 SPON1Q9HCB6 807 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 EXOC1Q9NV70 894 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 GJA3Q9Y6H8 435 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 CCP110O43303 1012 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 CDC25AP30304 524 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 FMR1Q06787 632 aaKnown RBP eCLIP18.34■□□□□ 0.53
LDB3-208ENST00000623007 FOXR2Q6PJQ5 311 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 FILIP1Q7Z7B0 1213 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 SPICE1Q8N0Z3 855 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 BLZF1Q9H2G9 400 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 KCNF1Q9H3M0 494 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 HACL1Q9UJ83 578 aa18.34■□□□□ 0.53
LDB3-208ENST00000623007 USH1GQ495M9 461 aa18.33■□□□□ 0.52
LDB3-208ENST00000623007 TMEM119Q4V9L6 283 aa18.33■□□□□ 0.52
LDB3-208ENST00000623007 CDKAL1Q5VV42 579 aa18.33■□□□□ 0.52
LDB3-208ENST00000623007 TMC6Q7Z403 805 aa18.33■□□□□ 0.52
LDB3-208ENST00000623007 VSTM4Q8IW00 320 aa18.33■□□□□ 0.52
LDB3-208ENST00000623007 HAS1Q92839 578 aa18.33■□□□□ 0.52
LDB3-208ENST00000623007 MMTAG2Q9BU76 263 aaKnown RBP18.33■□□□□ 0.52
LDB3-208ENST00000623007 WDR18Q9BV38 432 aa18.33■□□□□ 0.52
LDB3-208ENST00000623007 KCND1Q9NSA2 647 aa18.33■□□□□ 0.52
LDB3-208ENST00000623007 PITPNM2Q9BZ72 1349 aa18.33■□□□□ 0.52
LDB3-208ENST00000623007 PP2D1A8MPX8 630 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 ICAM1P05362 532 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 ATP1A3P13637 1013 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 KMT5BQ4FZB7 885 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 UNC13DQ70J99 1090 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 FAM114A1Q8IWE2 563 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 ADSSL1Q8N142 457 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 RAD54LQ92698 747 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 ZNF830Q96NB3 372 aaPredicted RBP18.32■□□□□ 0.52
LDB3-208ENST00000623007 SLF1Q9BQI6 1058 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 ZNF112Q9UJU3 913 aa18.32■□□□□ 0.52
LDB3-208ENST00000623007 LRRC10BA6NIK2 292 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 EDIL3O43854 480 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 KIF20AO95235 890 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 FGFR1OPO95684 399 aaKnown RBP18.31■□□□□ 0.52
LDB3-208ENST00000623007 TUBB4AP04350 444 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 MUTP22033 750 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 ZNF76P36508 570 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 ASIC1P78348 528 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 SETQ01105 290 aaPredicted RBP18.31■□□□□ 0.52
LDB3-208ENST00000623007 RASSF7Q02833 373 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 GRB10Q13322 594 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 CACTINQ8WUQ7 758 aaKnown RBP18.31■□□□□ 0.52
LDB3-208ENST00000623007 KIFC2Q96AC6 838 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 GPRC5DQ9NZD1 345 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 DOCK1Q14185 1865 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 A0A1B0GTH6 734 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 KLRC4O43908 158 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 TPM2P07951 284 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 EEF1GP26641 437 aaKnown RBP18.31■□□□□ 0.52
LDB3-208ENST00000623007 GHRHRQ02643 423 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 CCDC144BQ3MJ40 725 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 SUPT20HL1Q3ZLR7 823 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 SPECC1LQ69YQ0 1117 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 KLHL10Q6JEL2 608 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 KRT26Q7Z3Y9 468 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 SCYL3Q8IZE3 742 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 NELFBQ8WX92 580 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 STAMQ92783 540 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 THAP9Q9H5L6 903 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 PICK1Q9NRD5 415 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 CTNND2Q9UQB3 1225 aa18.31■□□□□ 0.52
LDB3-208ENST00000623007 C19orf81C9J6K1 198 aa18.3■□□□□ 0.52
LDB3-208ENST00000623007 TPM1P09493 284 aa18.3■□□□□ 0.52
LDB3-208ENST00000623007 SKILP12757 684 aa18.3■□□□□ 0.52
LDB3-208ENST00000623007 CD44P16070 742 aaKnown RBP18.3■□□□□ 0.52
LDB3-208ENST00000623007 PDE4DQ08499 809 aa18.3■□□□□ 0.52
LDB3-208ENST00000623007 TBC1D10BQ4KMP7 808 aaPredicted RBP18.3■□□□□ 0.52
LDB3-208ENST00000623007 PSDA5PKW4 1024 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms