RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 RNF207Q6ZRF8 634 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 TBC1D10CQ8IV04 446 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 RPUSD2Q8IZ73 545 aaKnown RBP12.9□□□□□ -0.34
LINC00963-214ENST00000622680 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-214ENST00000622680 SEZ6LQ9BYH1 1024 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 NEDD4P46934 1319 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 ARIH2O95376 493 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 NMIQ13287 307 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-214ENST00000622680 ALX1Q15699 326 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 USH1GQ495M9 461 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 ANKRD45Q5TZF3 282 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 KRT40Q6A162 431 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 SPRED2Q7Z698 418 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 MTG1Q9BT17 334 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-214ENST00000622680 GPHNQ9NQX3 736 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-214ENST00000622680 HELLSQ9NRZ9 838 aa12.89□□□□□ -0.35
LINC00963-214ENST00000622680 ZMYM6O95789 1325 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 RAD50Q92878 1312 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 PFKMP08237 780 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 SUPT20HL2P0C7V6 817 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 GOLGA8HP0CJ92 632 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 HSPD1P10809 573 aaKnown RBP12.88□□□□□ -0.35
LINC00963-214ENST00000622680 EDNRBP24530 442 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 KCNQ1P51787 676 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 PDE1AP54750 535 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 TMEM67Q5HYA8 995 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 IL27Q8NEV9 243 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 ZKSCAN3Q9BRR0 538 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 TRIOO75962 3097 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 CCDC171Q6TFL3 1326 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
LINC00963-214ENST00000622680 LOC102724159A0A0B4J2E5 919 aa12.87□□□□□ -0.35
LINC00963-214ENST00000622680 SNHG28P0DPA3 235 aa12.87□□□□□ -0.35
LINC00963-214ENST00000622680 TXNP10599 105 aaKnown RBP12.87□□□□□ -0.35
LINC00963-214ENST00000622680 PWP2Q15269 919 aaKnown RBP12.87□□□□□ -0.35
LINC00963-214ENST00000622680 SKIV2LQ15477 1246 aaKnown RBP12.87□□□□□ -0.35
LINC00963-214ENST00000622680 MCMDC2Q4G0Z9 681 aa12.87□□□□□ -0.35
LINC00963-214ENST00000622680 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
LINC00963-214ENST00000622680 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-214ENST00000622680 WDR81Q562E7 1941 aa12.87□□□□□ -0.35
LINC00963-214ENST00000622680 A6NJR5 290 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 PITPNM1O00562 1244 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 NKRFO15226 690 aaKnown RBP eCLIP12.86□□□□□ -0.353e-7■■■□□ 16.5
LINC00963-214ENST00000622680 IQCF3P0C7M6 154 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 ACTN1P12814 892 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 BRDTQ58F21 947 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-214ENST00000622680 NFRKBQ6P4R8 1299 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 MFSD6Q6ZSS7 791 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-214ENST00000622680 DNERQ8NFT8 737 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 SLC9A7Q96T83 725 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00963-214ENST00000622680 UBA5Q9GZZ9 404 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 COL20A1Q9P218 1284 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 MTCH2Q9Y6C9 303 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 MUC6Q6W4X9 2439 aa12.86□□□□□ -0.35
LINC00963-214ENST00000622680 RFC2P35250 354 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
LINC00963-214ENST00000622680 TAP1Q03518 808 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 CDC37Q16543 378 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-214ENST00000622680 LY6KQ17RY6 165 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 SEPT14Q6ZU15 432 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 CHST3Q7LGC8 479 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 HERC6Q8IVU3 1022 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 AFG1LQ8WV93 481 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 ARNTL2Q8WYA1 636 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 CTAGE1Q96RT6 745 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 MPHOSPH6Q99547 160 aaKnown RBP12.85□□□□□ -0.35
LINC00963-214ENST00000622680 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-214ENST00000622680 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
LINC00963-214ENST00000622680 LCHNA4D1U4 455 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 TRIM6-TRIM34B2RNG4 842 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 GTPBP6O43824 516 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-214ENST00000622680 MMP3P08254 477 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 BMP1P13497 986 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 ARHGAP1Q07960 439 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 BFSP2Q13515 415 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 PTGISQ16647 500 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 GDF6Q6KF10 455 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-214ENST00000622680 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 DHX38Q92620 1227 aaKnown RBP12.84□□□□□ -0.35
LINC00963-214ENST00000622680 RILPL2Q969X0 211 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 LNPKQ9C0E8 428 aa12.84□□□□□ -0.35
LINC00963-214ENST00000622680 EVPLQ92817 2033 aa12.83□□□□□ -0.36
LINC00963-214ENST00000622680 WDFY4Q6ZS81 3184 aa12.83□□□□□ -0.36
LINC00963-214ENST00000622680 WDR5P61964 334 aaKnown RBP12.83□□□□□ -0.36
LINC00963-214ENST00000622680 DEFB103AP81534 67 aa12.83□□□□□ -0.36
LINC00963-214ENST00000622680 PTPN11Q06124 597 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-214ENST00000622680 TCTN1Q2MV58 587 aa12.83□□□□□ -0.36
LINC00963-214ENST00000622680 GPATCH4Q5T3I0 446 aaKnown RBP12.83□□□□□ -0.36
LINC00963-214ENST00000622680 CCDC62Q6P9F0 684 aa12.83□□□□□ -0.36
LINC00963-214ENST00000622680 PNMA1Q8ND90 353 aa12.83□□□□□ -0.36
LINC00963-214ENST00000622680 GDPD5Q8WTR4 605 aa12.83□□□□□ -0.36
LINC00963-214ENST00000622680 KAT2BQ92831 832 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms