RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ERVK-24P63145 666 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 KRT85P78386 507 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 CCNA1P78396 465 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 GRM1Q13255 1194 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 NONOQ15233 471 aaKnown RBP eCLIP9.16□□□□□ -0.94
CPNE3-209ENST00000620393 RNF207Q6ZRF8 634 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 SHCBP1Q8NEM2 672 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 SYTL5Q8TDW5 730 aaPredicted RBP9.16□□□□□ -0.94
CPNE3-209ENST00000620393 CHAMP1Q96JM3 812 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 USP28Q96RU2 1077 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 SCAND2PQ9GZW5 306 aaPredicted RBP9.16□□□□□ -0.94
CPNE3-209ENST00000620393 MROH8Q9H579 483 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 ACAD9Q9H845 621 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 ZFYVE28Q9HCC9 887 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 HOMER2Q9NSB8 354 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 RTEL1Q9NZ71 1219 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 RCOR1Q9UKL0 485 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 NOL7Q9UMY1 257 aaKnown RBP9.16□□□□□ -0.94
CPNE3-209ENST00000620393 STK24Q9Y6E0 443 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 ATAD5Q96QE3 1844 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 SPDYE3A6NKU9 549 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 CA12O43570 354 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 AOC2O75106 756 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 BCRP11274 1271 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 ERCC3P19447 782 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 ATP2B1P20020 1258 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 USP11P51784 963 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 RPS6P62753 249 aaKnown RBP9.15□□□□□ -0.94
CPNE3-209ENST00000620393 BAATQ14032 418 aaPredicted RBP9.15□□□□□ -0.94
CPNE3-209ENST00000620393 TAF1CQ15572 869 aaPredicted RBP9.15□□□□□ -0.94
CPNE3-209ENST00000620393 INF2Q27J81 1249 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 ANO1Q5XXA6 986 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 C17orf99Q6UX52 265 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 NSMFQ6X4W1 530 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.15□□□□□ -0.94
CPNE3-209ENST00000620393 FCHSD1Q86WN1 690 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 NCAPG2Q86XI2 1143 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 ANKRD13CQ8N6S4 541 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 TBCKQ8TEA7 893 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 PGBD1Q96JS3 809 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 ANO3Q9BYT9 981 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 POLR3EQ9NVU0 708 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 CNPY2Q9Y2B0 182 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 CLIC4Q9Y696 253 aa9.15□□□□□ -0.94
CPNE3-209ENST00000620393 OTOFQ9HC10 1997 aa9.15□□□□□ -0.95
CPNE3-209ENST00000620393 STK25O00506 426 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 TLR2O60603 784 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 YEATS4O95619 227 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 CYP3A4P08684 503 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 NCLP19338 710 aaKnown RBP9.14□□□□□ -0.95
CPNE3-209ENST00000620393 MCM4P33991 863 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 SREBF1P36956 1147 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 NASPP49321 788 aaPredicted RBP9.14□□□□□ -0.95
CPNE3-209ENST00000620393 VEGFBP49765 207 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 CEBPZQ03701 1054 aaKnown RBP9.14□□□□□ -0.95
CPNE3-209ENST00000620393 SLC39A14Q15043 492 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 SF3A1Q15459 793 aaKnown RBP9.14□□□□□ -0.95
CPNE3-209ENST00000620393 ZNF174Q15697 407 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 CSPP1Q1MSJ5 1256 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 FAM110CQ1W6H9 321 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 TTC38Q5R3I4 469 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 NEK8Q86SG6 692 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 ANKRD35Q8N283 1001 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 LINC00301Q8NCQ3 95 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 LEO1Q8WVC0 666 aaPredicted RBP9.14□□□□□ -0.95
CPNE3-209ENST00000620393 CRYGNQ8WXF5 182 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 TAAR1Q96RJ0 339 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 R3HDMLQ9H3Y0 253 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 EHMT1Q9H9B1 1298 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 A1CFQ9NQ94 594 aaKnown RBP9.14□□□□□ -0.95
CPNE3-209ENST00000620393 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.14□□□□□ -0.95
CPNE3-209ENST00000620393 CYP39A1Q9NYL5 469 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 COL20A1Q9P218 1284 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 CPA4Q9UI42 421 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 PCDHB6Q9Y5E3 794 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 TRPM7Q96QT4 1865 aa9.14□□□□□ -0.95
CPNE3-209ENST00000620393 ADGRA2Q96PE1 1338 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 CYP3A7-CYP3A51PA0A087WV96 503 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 GOLGA6L22H0YM25 854 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 WNT7AO00755 349 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 STRNO43815 780 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 BMP15O95972 392 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 CYP3A7P24462 503 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 CIITAP33076 1130 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 HTRA3P83110 453 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 ARHGAP4P98171 946 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 ORC2Q13416 577 aaPredicted RBP9.13□□□□□ -0.95
CPNE3-209ENST00000620393 NBR1Q14596 966 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 STK38Q15208 465 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 PTPAQ15257 358 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 LETM2Q2VYF4 491 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 PPP4R3AQ6IN85 833 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 MOXD1Q6UVY6 613 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 CCAR1Q8IX12 1150 aaKnown RBP9.13□□□□□ -0.95
CPNE3-209ENST00000620393 C4orf32Q8N8J7 132 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 TMEM87AQ8NBN3 555 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 NSUN6Q8TEA1 469 aaKnown RBP9.13□□□□□ -0.95
CPNE3-209ENST00000620393 SPATA32Q96LK8 384 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 RMDN3Q96TC7 470 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 NAP1L4Q99733 375 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms