RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 SYTL5Q8TDW5 730 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-221ENST00000618363 SEC63Q9UGP8 760 aaKnown RBP13.57□□□□□ -0.24
SHANK2-221ENST00000618363 PNMA6FA0A0J9YX94 578 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 TRIM43BA6NCK2 446 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 KIAA0355O15063 1070 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 DDAH1O94760 285 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 MYL3P08590 195 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
SHANK2-221ENST00000618363 ITGA7Q13683 1181 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 SEPT14Q6ZU15 432 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 SH3RF1Q7Z6J0 888 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 IGDCC4Q8TDY8 1250 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 TRIM43Q96BQ3 446 aaPredicted RBP13.56□□□□□ -0.24
SHANK2-221ENST00000618363 RRP36Q96EU6 259 aaKnown RBP13.56□□□□□ -0.24
SHANK2-221ENST00000618363 TAAR1Q96RJ0 339 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 PIGSQ96S52 555 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 MAP3K14Q99558 947 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 LZTS2Q9BRK4 669 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
SHANK2-221ENST00000618363 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
SHANK2-221ENST00000618363 RBM47A0AV96 593 aaKnown RBP13.55□□□□□ -0.24
SHANK2-221ENST00000618363 GCOM1H8Y6P7 765 aaPredicted RBP13.55□□□□□ -0.24
SHANK2-221ENST00000618363 KPNA6O60684 536 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 POLR2MP0CAP2 368 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 EIF2AK2P19525 551 aaKnown RBP13.55□□□□□ -0.24
SHANK2-221ENST00000618363 EDNRBP24530 442 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 FPGSQ05932 587 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 FAAP100Q0VG06 881 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 TROAPQ12815 778 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 GPR153Q6NV75 609 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 PIBF1Q8WXW3 757 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 TBC1D5Q92609 795 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 LRCH3Q96II8 777 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 RIOX1Q9H6W3 641 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 LY9Q9HBG7 655 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 TAF6LQ9Y6J9 622 aa13.55□□□□□ -0.24
SHANK2-221ENST00000618363 EIF3JO75822 258 aaKnown RBP13.54□□□□□ -0.24
SHANK2-221ENST00000618363 TIMP1P01033 207 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 CDK7P50613 346 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 ANTXR2P58335 489 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 FGD1P98174 961 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 KRT32Q14532 448 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 NECTIN1Q15223 517 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 SKAP1Q86WV1 359 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 TMEM199Q8N511 208 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 CUL5Q93034 780 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 MTMR8Q96EF0 704 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 NEK1Q96PY6 1258 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 MTG1Q9BT17 334 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-221ENST00000618363 SENP2Q9HC62 589 aa13.54□□□□□ -0.24
SHANK2-221ENST00000618363 SOX1O00570 391 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-221ENST00000618363 SH2B2O14492 632 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-221ENST00000618363 CTAGE5O15320 804 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 GH1P01241 217 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 NR3C2P08235 984 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 SUPT20HL2P0C7V6 817 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 MYCLP12524 364 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-221ENST00000618363 SMARCA1P28370 1054 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 LIFRP42702 1097 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 HSD17B4P51659 736 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 PPIGQ13427 754 aaKnown RBP eCLIP13.53□□□□□ -0.247e-7■■■□□ 15.6
SHANK2-221ENST00000618363 FAM47CQ5HY64 1035 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 KCNV1Q6PIU1 500 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 FCHSD1Q86WN1 690 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 MYL10Q9BUA6 226 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 MRVI1Q9Y6F6 885 aa13.53□□□□□ -0.24
SHANK2-221ENST00000618363 LCTP09848 1927 aa13.52□□□□□ -0.24
SHANK2-221ENST00000618363 HMGB1P09429 215 aaKnown RBP13.52□□□□□ -0.25
SHANK2-221ENST00000618363 CCND2P30279 289 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 HOXA13P31271 388 aaPredicted RBP13.52□□□□□ -0.25
SHANK2-221ENST00000618363 CHMP4BP1P59074 171 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 PSMC6P62333 389 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 SHHQ15465 462 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 TMEM63BQ5T3F8 832 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 MFSD5Q6N075 450 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 FAM126BQ8IXS8 530 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 RNPC3Q96LT9 517 aaKnown RBP13.52□□□□□ -0.25
SHANK2-221ENST00000618363 SPZ1Q9BXG8 430 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 PPP1R12CQ9BZL4 782 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 COL20A1Q9P218 1284 aa13.52□□□□□ -0.25
SHANK2-221ENST00000618363 BAZ2BQ9UIF8 2168 aaKnown RBP13.51□□□□□ -0.25
SHANK2-221ENST00000618363 LRRC37A2A6NM11 1700 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 CYTH3O43739 400 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 PPP1R11O60927 126 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-221ENST00000618363 CASTP20810 708 aaKnown RBP13.51□□□□□ -0.25
SHANK2-221ENST00000618363 PTGS1P23219 599 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 PURAQ00577 322 aaKnown RBP13.51□□□□□ -0.25
SHANK2-221ENST00000618363 LY6KQ17RY6 165 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 DHX32Q7L7V1 743 aaKnown RBP13.51□□□□□ -0.25
SHANK2-221ENST00000618363 DEFB123Q8N688 67 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 COPS5Q92905 334 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 HIPK3Q9H422 1215 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 TBX21Q9UL17 535 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 NOD1Q9Y239 953 aa13.51□□□□□ -0.25
SHANK2-221ENST00000618363 A6NJR5 290 aa13.5□□□□□ -0.25
SHANK2-221ENST00000618363 REC8O95072 547 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms