RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 RRAGBQ5VZM2 374 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PLA2G4DQ86XP0 818 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 MED15Q96RN5 788 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 NUDT12Q9BQG2 462 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 TANGO6Q9C0B7 1094 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 TTC12Q9H892 705 aaPredicted RBP23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 ZHX2Q9Y6X8 837 aa23.25■■□□□ 1.31
CNTNAP3B-212ENST00000617422 USP2O75604 605 aaPredicted RBP23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 GCFC2P16383 781 aaKnown RBP23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 FCHSD1Q86WN1 690 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PRPF38AQ8NAV1 312 aaKnown RBP23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 ZNF280CQ8ND82 737 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 LENG9Q96B70 501 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 HOOK2Q96ED9 719 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 ZNF830Q96NB3 372 aaPredicted RBP23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 RPAP3Q9H6T3 665 aaPredicted RBP23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PICK1Q9NRD5 415 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 RLFQ13129 1914 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 SPDYE3A6NKU9 549 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 FAM86B1E9PN63 330 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 FAM86B2P0C5J1 330 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 ZNF75DP51815 510 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 WNK4Q96J92 1243 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PYM1Q9BRP8 204 aaKnown RBP23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 KCNMB3Q9NPA1 279 aa23.24■■□□□ 1.31
CNTNAP3B-212ENST00000617422 FMR1Q06787 632 aaKnown RBP eCLIP23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 CYP2W1Q8TAV3 490 aa23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 LRWD1Q9UFC0 647 aa23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PAPPA2Q9BXP8 1791 aa23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 SMC2O95347 1197 aa23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 FOSP01100 380 aaPredicted RBP23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 ICAM1P05362 532 aa23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 SARM1Q6SZW1 724 aa23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 SMYD4Q8IYR2 804 aaPredicted RBP23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 TRIML1Q8N9V2 468 aa23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 RASSF8Q8NHQ8 419 aa23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 TRIM5Q9C035 493 aa23.23■■□□□ 1.31
CNTNAP3B-212ENST00000617422 GTPBP6O43824 516 aaPredicted RBP23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 FLOT1O75955 427 aa23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 CD44P16070 742 aaKnown RBP23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 HMGCS2P54868 508 aa23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 GRB10Q13322 594 aa23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 SUPT20HL1Q3ZLR7 823 aa23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PNMA5Q96PV4 448 aa23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 SLC38A10Q9HBR0 1119 aa23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 KBTBD4Q9NVX7 518 aa23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 OTOFQ9HC10 1997 aa23.22■■□□□ 1.31
CNTNAP3B-212ENST00000617422 GTF2F1P35269 517 aaKnown RBP eCLIP23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 GSDMAQ96QA5 445 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 CCPG1Q9ULG6 757 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PPP1R9AQ9ULJ8 1098 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 MRPL11Q9Y3B7 192 aaKnown RBP23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 IKBKBO14920 756 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PDIA5Q14554 519 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 PRR16Q569H4 304 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 MOXD1Q6UVY6 613 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 SPC24Q8NBT2 197 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 ETNPPLQ8TBG4 499 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 CCDC34Q96HJ3 373 aa23.21■■□□□ 1.31
CNTNAP3B-212ENST00000617422 GCOM1H8Y6P7 765 aaPredicted RBP23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 NFIBO00712 420 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 POLR2MP0CAP2 368 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 USP14P54578 494 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 ECM1Q16610 540 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 NOL9Q5SY16 702 aaKnown RBP23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 MCTP2Q6DN12 878 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 CPXCR1Q8N123 301 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 MLKLQ8NB16 471 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 CLEC4DQ8WXI8 215 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 AS3MTQ9HBK9 375 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 RAVER2Q9HCJ3 691 aaKnown RBP23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 ABCB11O95342 1321 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 UBXN2AP68543 259 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 TRAF1Q13077 416 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 TMEM266Q2M3C6 531 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 L3MBTL3Q96JM7 780 aaPredicted RBP23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 SNCAIPQ9Y6H5 919 aa23.2■■□□□ 1.3
CNTNAP3B-212ENST00000617422 ATP1A3P13637 1013 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 CIITAP33076 1130 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 MYL5Q02045 173 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 VGLL4Q14135 290 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 Q4G0T1 1027 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 TRMT44Q8IYL2 757 aaKnown RBP23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 CNKSR2Q8WXI2 1034 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 NAP1L4Q99733 375 aaKnown RBP23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 BLOC1S4Q9NUP1 217 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 PCDHA12Q9UN75 941 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 AFG3L2Q9Y4W6 797 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 WDR90Q96KV7 1748 aa23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 COL11A1P12107 1806 aaPredicted RBP23.19■■□□□ 1.3
CNTNAP3B-212ENST00000617422 CYP3A4P08684 503 aa23.18■■□□□ 1.3
CNTNAP3B-212ENST00000617422 KCNK18Q7Z418 384 aa23.18■■□□□ 1.3
CNTNAP3B-212ENST00000617422 SULF1Q8IWU6 871 aa23.18■■□□□ 1.3
CNTNAP3B-212ENST00000617422 ATG4CQ96DT6 458 aa23.18■■□□□ 1.3
CNTNAP3B-212ENST00000617422 COL20A1Q9P218 1284 aa23.18■■□□□ 1.3
CNTNAP3B-212ENST00000617422 IGLV3-22A0A075B6J6 115 aa23.18■■□□□ 1.3
CNTNAP3B-212ENST00000617422 KLRC4O43908 158 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms