RNA–Protein interactions for RNA: ENST00000613864.4

TARDBP-215, Transcript of TAR DNA binding protein, humanhuman

TSL 4

Gene TARDBP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-215ENST00000613864 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
TARDBP-215ENST00000613864 OR6J1Q8NGC5 347 aa16.92■□□□□ 0.3
TARDBP-215ENST00000613864 SNHG28P0DPA3 235 aa16.91■□□□□ 0.3
TARDBP-215ENST00000613864 NFRKBQ6P4R8 1299 aa16.91■□□□□ 0.3
TARDBP-215ENST00000613864 CCDC62Q6P9F0 684 aa16.91■□□□□ 0.3
TARDBP-215ENST00000613864 RNF207Q6ZRF8 634 aa16.91■□□□□ 0.3
TARDBP-215ENST00000613864 MICALL1Q8N3F8 863 aa16.91■□□□□ 0.3
TARDBP-215ENST00000613864 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
TARDBP-215ENST00000613864 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
TARDBP-215ENST00000613864 KIAA1217Q5T5P2 1943 aa16.91■□□□□ 0.3
TARDBP-215ENST00000613864 A0A0D9SFI3 127 aa16.9■□□□□ 0.3
TARDBP-215ENST00000613864 PITPNM1O00562 1244 aa16.9■□□□□ 0.3
TARDBP-215ENST00000613864 LPXNO60711 386 aa16.9■□□□□ 0.3
TARDBP-215ENST00000613864 ZNF543Q08ER8 600 aa16.9■□□□□ 0.3
TARDBP-215ENST00000613864 PHOSPHO2Q8TCD6 241 aa16.9■□□□□ 0.3
TARDBP-215ENST00000613864 HELLSQ9NRZ9 838 aa16.9■□□□□ 0.3
TARDBP-215ENST00000613864 NKRFO15226 690 aaKnown RBP eCLIP16.89■□□□□ 0.29
TARDBP-215ENST00000613864 TLL1O43897 1013 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 RFC2P35250 354 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 TCTN1Q2MV58 587 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 ZNF589Q86UQ0 364 aaPredicted RBP16.89■□□□□ 0.29
TARDBP-215ENST00000613864 HERC6Q8IVU3 1022 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 DNERQ8NFT8 737 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 SCFD2Q8WU76 684 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 KAT2BQ92831 832 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 EVI5LQ96CN4 794 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 SLC9A7Q96T83 725 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 CPVLQ9H3G5 476 aa16.89■□□□□ 0.29
TARDBP-215ENST00000613864 TXNP10599 105 aaKnown RBP16.88■□□□□ 0.29
TARDBP-215ENST00000613864 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
TARDBP-215ENST00000613864 PTPN11Q06124 597 aaPredicted RBP16.88■□□□□ 0.29
TARDBP-215ENST00000613864 PDE4DQ08499 809 aa16.88■□□□□ 0.29
TARDBP-215ENST00000613864 PPP2R5BQ15173 497 aa16.88■□□□□ 0.29
TARDBP-215ENST00000613864 FAM47CQ5HY64 1035 aa16.88■□□□□ 0.29
TARDBP-215ENST00000613864 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
TARDBP-215ENST00000613864 RGS22Q8NE09 1264 aa16.88■□□□□ 0.29
TARDBP-215ENST00000613864 DHX38Q92620 1227 aaKnown RBP16.88■□□□□ 0.29
TARDBP-215ENST00000613864 TTC14Q96N46 770 aa16.88■□□□□ 0.29
TARDBP-215ENST00000613864 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
TARDBP-215ENST00000613864 COL20A1Q9P218 1284 aa16.88■□□□□ 0.29
TARDBP-215ENST00000613864 WDR19Q8NEZ3 1342 aa16.88■□□□□ 0.29
TARDBP-215ENST00000613864 MYH7BA7E2Y1 1941 aa16.88■□□□□ 0.29
TARDBP-215ENST00000613864 COL4A4P53420 1690 aaPredicted RBP16.88■□□□□ 0.29
TARDBP-215ENST00000613864 KPNA6O60684 536 aa16.87■□□□□ 0.29
TARDBP-215ENST00000613864 PDE1AP54750 535 aa16.87■□□□□ 0.29
TARDBP-215ENST00000613864 HAND2P61296 217 aa16.87■□□□□ 0.29
TARDBP-215ENST00000613864 MCMDC2Q4G0Z9 681 aa16.87■□□□□ 0.29
TARDBP-215ENST00000613864 GDF6Q6KF10 455 aaPredicted RBP16.87■□□□□ 0.29
TARDBP-215ENST00000613864 TMCO2Q7Z6W1 182 aaPredicted RBP16.87■□□□□ 0.29
TARDBP-215ENST00000613864 TBC1D10CQ8IV04 446 aa16.87■□□□□ 0.29
TARDBP-215ENST00000613864 TSPYL2Q9H2G4 693 aaPredicted RBP16.87■□□□□ 0.29
TARDBP-215ENST00000613864 LCHNA4D1U4 455 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 GOLGA8HP0CJ92 632 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 ACTN1P12814 892 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 ARHGAP1Q07960 439 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 GRB10Q13322 594 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 RETREG2Q8NC44 543 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 AFG1LQ8WV93 481 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 ARNTL2Q8WYA1 636 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 KHSRPQ92945 711 aaKnown RBP eCLIP16.86■□□□□ 0.29
TARDBP-215ENST00000613864 TAAR1Q96RJ0 339 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 UBA5Q9GZZ9 404 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 EPHX3Q9H6B9 360 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 TOMM22Q9NS69 142 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 ZMYM6O95789 1325 aa16.86■□□□□ 0.29
TARDBP-215ENST00000613864 NMIQ13287 307 aaPredicted RBP16.85■□□□□ 0.29
TARDBP-215ENST00000613864 BFSP2Q13515 415 aa16.85■□□□□ 0.29
TARDBP-215ENST00000613864 PTGISQ16647 500 aa16.85■□□□□ 0.29
TARDBP-215ENST00000613864 LY6KQ17RY6 165 aa16.85■□□□□ 0.29
TARDBP-215ENST00000613864 ANKRD45Q5TZF3 282 aa16.85■□□□□ 0.29
TARDBP-215ENST00000613864 TRAF7Q6Q0C0 670 aa16.85■□□□□ 0.29
TARDBP-215ENST00000613864 SESTD1Q86VW0 696 aa16.85■□□□□ 0.29
TARDBP-215ENST00000613864 SYTL5Q8TDW5 730 aaPredicted RBP16.85■□□□□ 0.29
TARDBP-215ENST00000613864 FTOQ9C0B1 505 aaKnown RBP eCLIP16.85■□□□□ 0.29
TARDBP-215ENST00000613864 MYH6P13533 1939 aa16.85■□□□□ 0.29
TARDBP-215ENST00000613864 NBNO60934 754 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 MMP3P08254 477 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 PLA2G5P39877 138 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 WDR5P61964 334 aaKnown RBP16.84■□□□□ 0.29
TARDBP-215ENST00000613864 DEFB103AP81534 67 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 RBL2Q08999 1139 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 SKIV2LQ15477 1246 aaKnown RBP16.84■□□□□ 0.29
TARDBP-215ENST00000613864 AAK1Q2M2I8 961 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 USH1GQ495M9 461 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 BRDTQ58F21 947 aaPredicted RBP16.84■□□□□ 0.29
TARDBP-215ENST00000613864 IL27Q8NEV9 243 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 PNMA2Q9UL42 364 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 COG5Q9UP83 839 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 RAD50Q92878 1312 aa16.84■□□□□ 0.29
TARDBP-215ENST00000613864 GTPBP6O43824 516 aaPredicted RBP16.83■□□□□ 0.28
TARDBP-215ENST00000613864 BAIAP3O94812 1187 aa16.83■□□□□ 0.28
TARDBP-215ENST00000613864 CXCL10P02778 98 aa16.83■□□□□ 0.28
TARDBP-215ENST00000613864 NEDD4P46934 1319 aa16.83■□□□□ 0.28
TARDBP-215ENST00000613864 TRIM71Q2Q1W2 868 aaKnown RBP16.83■□□□□ 0.28
TARDBP-215ENST00000613864 AFAP1L1Q8TED9 768 aa16.83■□□□□ 0.28
TARDBP-215ENST00000613864 WNT8BQ93098 351 aa16.83■□□□□ 0.28
TARDBP-215ENST00000613864 CD320Q9NPF0 282 aa16.83■□□□□ 0.28
TARDBP-215ENST00000613864 SELPP16109 830 aa16.82■□□□□ 0.28
TARDBP-215ENST00000613864 HIC1Q14526 733 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms