RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 LOC102724159A0A0B4J2E5 919 aa27.63■■■□□ 2.01
MMP28-203ENST00000612672 LPXNO60711 386 aa27.63■■■□□ 2.01
MMP28-203ENST00000612672 PDHBP11177 359 aa27.63■■■□□ 2.01
MMP28-203ENST00000612672 PPP2R5BQ15173 497 aa27.63■■■□□ 2.01
MMP28-203ENST00000612672 PWP2Q15269 919 aaKnown RBP27.63■■■□□ 2.01
MMP28-203ENST00000612672 NFRKBQ6P4R8 1299 aa27.63■■■□□ 2.01
MMP28-203ENST00000612672 RNF207Q6ZRF8 634 aa27.63■■■□□ 2.01
MMP28-203ENST00000612672 LCHNA4D1U4 455 aa27.62■■■□□ 2.01
MMP28-203ENST00000612672 PITPNM1O00562 1244 aa27.62■■■□□ 2.01
MMP28-203ENST00000612672 TOP1P11387 765 aaKnown RBP27.62■■■□□ 2.01
MMP28-203ENST00000612672 RFC2P35250 354 aa27.62■■■□□ 2.01
MMP28-203ENST00000612672 TCTN1Q2MV58 587 aa27.62■■■□□ 2.01
MMP28-203ENST00000612672 RRP12Q5JTH9 1297 aaKnown RBP27.62■■■□□ 2.01
MMP28-203ENST00000612672 PDE4DQ08499 809 aa27.61■■■□□ 2.01
MMP28-203ENST00000612672 GRB10Q13322 594 aa27.61■■■□□ 2.01
MMP28-203ENST00000612672 ALX1Q15699 326 aa27.61■■■□□ 2.01
MMP28-203ENST00000612672 KHSRPQ92945 711 aaKnown RBP eCLIP27.61■■■□□ 2.01
MMP28-203ENST00000612672 FAM227BQ96M60 508 aa27.61■■■□□ 2.01
MMP28-203ENST00000612672 CPVLQ9H3G5 476 aa27.61■■■□□ 2.01
MMP28-203ENST00000612672 EPHX3Q9H6B9 360 aa27.61■■■□□ 2.01
MMP28-203ENST00000612672 GPHNQ9NQX3 736 aaPredicted RBP27.61■■■□□ 2.01
MMP28-203ENST00000612672 A0A0D9SFI3 127 aa27.6■■■□□ 2.01
MMP28-203ENST00000612672 ACTN1P12814 892 aa27.6■■■□□ 2.01
MMP28-203ENST00000612672 ZNF543Q08ER8 600 aa27.6■■■□□ 2.01
MMP28-203ENST00000612672 PHOSPHO2Q8TCD6 241 aa27.6■■■□□ 2.01
MMP28-203ENST00000612672 SCFD2Q8WU76 684 aa27.6■■■□□ 2.01
MMP28-203ENST00000612672 DHX38Q92620 1227 aaKnown RBP27.6■■■□□ 2.01
MMP28-203ENST00000612672 FTOQ9C0B1 505 aaKnown RBP eCLIP27.6■■■□□ 2.01
MMP28-203ENST00000612672 TOMM22Q9NS69 142 aa27.6■■■□□ 2.01
MMP28-203ENST00000612672 GTPBP6O43824 516 aaPredicted RBP27.59■■■□□ 2.01
MMP28-203ENST00000612672 TLL1O43897 1013 aa27.59■■■□□ 2.01
MMP28-203ENST00000612672 FGAP02671 866 aa27.59■■■□□ 2.01
MMP28-203ENST00000612672 TCP11L1Q9NUJ3 509 aa27.59■■■□□ 2.01
MMP28-203ENST00000612672 NKRFO15226 690 aaKnown RBP eCLIP27.58■■■□□ 2.01
MMP28-203ENST00000612672 SNHG28P0DPA3 235 aa27.58■■■□□ 2.01
MMP28-203ENST00000612672 TXNP10599 105 aaKnown RBP27.58■■■□□ 2.01
MMP28-203ENST00000612672 CHMP4BP1P59074 171 aa27.58■■■□□ 2.01
MMP28-203ENST00000612672 HAND2P61296 217 aa27.58■■■□□ 2.01
MMP28-203ENST00000612672 GDF6Q6KF10 455 aaPredicted RBP27.58■■■□□ 2.01
MMP28-203ENST00000612672 CCDC62Q6P9F0 684 aa27.58■■■□□ 2.01
MMP28-203ENST00000612672 ZNF589Q86UQ0 364 aaPredicted RBP27.58■■■□□ 2.01
MMP28-203ENST00000612672 TBC1D5Q92609 795 aa27.58■■■□□ 2.01
MMP28-203ENST00000612672 MYH6P13533 1939 aa27.58■■■□□ 2.01
MMP28-203ENST00000612672 WDR19Q8NEZ3 1342 aa27.58■■■□□ 2.01
MMP28-203ENST00000612672 SIP14410 1827 aa27.57■■■□□ 2
MMP28-203ENST00000612672 LAMA4Q16363 1823 aa27.57■■■□□ 2
MMP28-203ENST00000612672 WDR5P61964 334 aaKnown RBP27.57■■■□□ 2
MMP28-203ENST00000612672 DEFB103AP81534 67 aa27.57■■■□□ 2
MMP28-203ENST00000612672 PTPN11Q06124 597 aaPredicted RBP27.57■■■□□ 2
MMP28-203ENST00000612672 AAK1Q2M2I8 961 aa27.57■■■□□ 2
MMP28-203ENST00000612672 TBC1D10CQ8IV04 446 aa27.57■■■□□ 2
MMP28-203ENST00000612672 RETREG2Q8NC44 543 aa27.57■■■□□ 2
MMP28-203ENST00000612672 KAT2BQ92831 832 aa27.57■■■□□ 2
MMP28-203ENST00000612672 COL20A1Q9P218 1284 aa27.57■■■□□ 2
MMP28-203ENST00000612672 USH1GQ495M9 461 aa27.56■■■□□ 2
MMP28-203ENST00000612672 DNERQ8NFT8 737 aa27.56■■■□□ 2
MMP28-203ENST00000612672 GDPD5Q8WTR4 605 aa27.56■■■□□ 2
MMP28-203ENST00000612672 AFG1LQ8WV93 481 aa27.56■■■□□ 2
MMP28-203ENST00000612672 FAM122AQ96E09 287 aa27.56■■■□□ 2
MMP28-203ENST00000612672 RAD50Q92878 1312 aa27.56■■■□□ 2
MMP28-203ENST00000612672 MYH7BA7E2Y1 1941 aa27.55■■■□□ 2
MMP28-203ENST00000612672 MMP3P08254 477 aa27.55■■■□□ 2
MMP28-203ENST00000612672 GOLGA8HP0CJ92 632 aa27.55■■■□□ 2
MMP28-203ENST00000612672 ARHGAP1Q07960 439 aa27.55■■■□□ 2
MMP28-203ENST00000612672 BFSP2Q13515 415 aa27.55■■■□□ 2
MMP28-203ENST00000612672 PTGISQ16647 500 aa27.55■■■□□ 2
MMP28-203ENST00000612672 LY6KQ17RY6 165 aa27.55■■■□□ 2
MMP28-203ENST00000612672 LRFN3Q9BTN0 628 aa27.55■■■□□ 2
MMP28-203ENST00000612672 C1QTNF1Q9BXJ1 281 aa27.55■■■□□ 2
MMP28-203ENST00000612672 HELLSQ9NRZ9 838 aa27.55■■■□□ 2
MMP28-203ENST00000612672 KPNA6O60684 536 aa27.54■■■□□ 2
MMP28-203ENST00000612672 BRDTQ58F21 947 aaPredicted RBP27.54■■■□□ 2
MMP28-203ENST00000612672 C11orf16Q9NQ32 467 aa27.54■■■□□ 2
MMP28-203ENST00000612672 COG5Q9UP83 839 aa27.54■■■□□ 2
MMP28-203ENST00000612672 NEDD4P46934 1319 aa27.53■■■□□ 2
MMP28-203ENST00000612672 NBNO60934 754 aa27.53■■■□□ 2
MMP28-203ENST00000612672 BAIAP3O94812 1187 aa27.53■■■□□ 2
MMP28-203ENST00000612672 HSPD1P10809 573 aaKnown RBP27.53■■■□□ 2
MMP28-203ENST00000612672 EVI5LQ96CN4 794 aa27.53■■■□□ 2
MMP28-203ENST00000612672 UBA5Q9GZZ9 404 aa27.53■■■□□ 2
MMP28-203ENST00000612672 CD320Q9NPF0 282 aa27.53■■■□□ 2
MMP28-203ENST00000612672 NOD1Q9Y239 953 aa27.53■■■□□ 2
MMP28-203ENST00000612672 ZMYM6O95789 1325 aa27.52■■■□□ 2
MMP28-203ENST00000612672 AFAP1L1Q8TED9 768 aa27.52■■■□□ 2
MMP28-203ENST00000612672 WNT8BQ93098 351 aa27.52■■■□□ 2
MMP28-203ENST00000612672 HLA-CQ95604 372 aa27.52■■■□□ 2
MMP28-203ENST00000612672 TAAR1Q96RJ0 339 aa27.52■■■□□ 2
MMP28-203ENST00000612672 ZKSCAN3Q9BRR0 538 aa27.52■■■□□ 2
MMP28-203ENST00000612672 NMIQ13287 307 aaPredicted RBP27.51■■□□□ 1.99
MMP28-203ENST00000612672 TRAF7Q6Q0C0 670 aa27.51■■□□□ 1.99
MMP28-203ENST00000612672 SEPT14Q6ZU15 432 aa27.51■■□□□ 1.99
MMP28-203ENST00000612672 SESTD1Q86VW0 696 aa27.51■■□□□ 1.99
MMP28-203ENST00000612672 MICAL3Q7RTP6 2002 aa27.5■■□□□ 1.99
MMP28-203ENST00000612672 KIF28PB7ZC32 967 aa27.5■■□□□ 1.99
MMP28-203ENST00000612672 KCNJ6P48051 423 aa27.5■■□□□ 1.99
MMP28-203ENST00000612672 LRRC8DQ7L1W4 858 aa27.5■■□□□ 1.99
MMP28-203ENST00000612672 CHST3Q7LGC8 479 aa27.5■■□□□ 1.99
MMP28-203ENST00000612672 CAGE1Q8TC20 777 aa27.5■■□□□ 1.99
MMP28-203ENST00000612672 SYTL5Q8TDW5 730 aaPredicted RBP27.5■■□□□ 1.99
MMP28-203ENST00000612672 MTUS1Q9ULD2 1270 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms