RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 CST5P28325 142 aaPredicted RBP20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 CDC27P30260 824 aa20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 GJA9P57773 515 aa20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 FUT2Q10981 343 aa20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 LRRC26Q2I0M4 334 aa20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 ARHGEF16Q5VV41 709 aa20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 NOL8Q76FK4 1167 aaKnown RBP20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 KLHDC9Q8NEP7 349 aa20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 SPC25Q9HBM1 224 aa20.87■□□□□ 0.93
SEMA3B-211ENST00000612509 RBM47A0AV96 593 aaKnown RBP20.86■□□□□ 0.93
SEMA3B-211ENST00000612509 PTGS1P23219 599 aa20.86■□□□□ 0.93
SEMA3B-211ENST00000612509 ANAPC15P60006 121 aa20.86■□□□□ 0.93
SEMA3B-211ENST00000612509 IRX5P78411 483 aaPredicted RBP20.86■□□□□ 0.93
SEMA3B-211ENST00000612509 TOB2Q14106 344 aaPredicted RBP20.86■□□□□ 0.93
SEMA3B-211ENST00000612509 IQSEC1Q6DN90 963 aa20.86■□□□□ 0.93
SEMA3B-211ENST00000612509 C7orf61Q8IZ16 206 aa20.86■□□□□ 0.93
SEMA3B-211ENST00000612509 IWS1Q96ST2 819 aa20.86■□□□□ 0.93
SEMA3B-211ENST00000612509 ATN1P54259 1190 aaPredicted RBP20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 NKX3-2P78367 333 aa20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 PPP2R5BQ15173 497 aa20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 DUSP28Q4G0W2 176 aa20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 TMEM63BQ5T3F8 832 aa20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 CCSAPQ6IQ19 270 aaPredicted RBP20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 HEATR3Q7Z4Q2 680 aa20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 GPKOWQ92917 476 aaPredicted RBP eCLIP20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 FERMT2Q96AC1 680 aa20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 PDCD2LQ9BRP1 358 aa20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 TSEN34Q9BSV6 310 aaKnown RBP20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 NR2E3Q9Y5X4 410 aa20.85■□□□□ 0.93
SEMA3B-211ENST00000612509 FRMPD4Q14CM0 1322 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 CCDC196A0A1B0GTZ2 297 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 A0A1W2PQ45 241 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 A0A1W2PQY0 241 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 MOXD2PA6NHM9 499 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 H0YGN5 161 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 CTAGE5O15320 804 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 EVCP57679 992 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 C8orf34Q49A92 452 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 WWC2Q6AWC2 1192 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 FCHSD1Q86WN1 690 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 SCFD2Q8WU76 684 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 WDR11Q9BZH6 1224 aa20.84■□□□□ 0.93
SEMA3B-211ENST00000612509 SEC24BO95487 1268 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 NR3C2P08235 984 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 ADD1P35611 737 aaKnown RBP20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 ACLYP53396 1101 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 SNX17Q15036 470 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 PGM5Q15124 567 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 STXBP2Q15833 593 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 KCNA10Q16322 511 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 PCSK9Q8NBP7 692 aaKnown RBP20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 IL31RAQ8NI17 732 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 CUL5Q93034 780 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 IL17RAQ96F46 866 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 AP5M1Q9H0R1 490 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 PDRG1Q9NUG6 133 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 Q9Y3F1 56 aa20.83■□□□□ 0.93
SEMA3B-211ENST00000612509 PIK3CDO00329 1044 aa20.82■□□□□ 0.92
SEMA3B-211ENST00000612509 RTP1P59025 263 aa20.82■□□□□ 0.92
SEMA3B-211ENST00000612509 BEX3Q00994 111 aa20.82■□□□□ 0.92
SEMA3B-211ENST00000612509 FSCN1Q16658 493 aaKnown RBP20.82■□□□□ 0.92
SEMA3B-211ENST00000612509 PPP1R18Q6NYC8 613 aa20.82■□□□□ 0.92
SEMA3B-211ENST00000612509 USP17L6PQ6QN14 398 aa20.82■□□□□ 0.92
SEMA3B-211ENST00000612509 SLC39A5Q6ZMH5 540 aa20.82■□□□□ 0.92
SEMA3B-211ENST00000612509 SMARCC2Q8TAQ2 1214 aa20.82■□□□□ 0.92
SEMA3B-211ENST00000612509 hCG_1984214I3L0E3 225 aa20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 MEIS2O14770 477 aa20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 NKRFO15226 690 aaKnown RBP eCLIP20.81■□□□□ 0.929e-6■□□□□ 8.3
SEMA3B-211ENST00000612509 DYNC1LI2O43237 492 aaPredicted RBP20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 ARIH2O95376 493 aa20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 ASGR1P07306 291 aa20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 PDIA3P30101 505 aaKnown RBP20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 TTLL4Q14679 1199 aa20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 GNASQ5JWF2 1037 aa20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 TYW1BQ6NUM6 668 aa20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 SEPT14Q6ZU15 432 aa20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 ZNF713Q8N859 430 aaPredicted RBP20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 STARD7Q9NQZ5 370 aa20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 V9GY48 417 aaPredicted RBP20.81■□□□□ 0.92
SEMA3B-211ENST00000612509 EIF3JO75822 258 aaKnown RBP20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 TXNP10599 105 aaKnown RBP20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 MYCLP12524 364 aaPredicted RBP20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 CCND2P30279 289 aa20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 NAPAP54920 295 aa20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 CCT2P78371 535 aaKnown RBP20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 TRIM60Q495X7 471 aa20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 C1orf53Q5VUE5 145 aa20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 OR6J1Q8NGC5 347 aa20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 PSTPIP2Q9H939 334 aa20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 NCOA5Q9HCD5 579 aaKnown RBP20.8■□□□□ 0.92
SEMA3B-211ENST00000612509 CEP290O15078 2479 aa20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 STXBP3O00186 592 aa20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 NTRK3Q16288 839 aa20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 UBE2SQ16763 222 aa20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 PFKFB3Q16875 520 aaPredicted RBP20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 CCDC62Q6P9F0 684 aa20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 COPS5Q92905 334 aa20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 GLT1D1Q96MS3 346 aa20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 LARP6Q9BRS8 491 aaKnown RBP20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 RBM27Q9P2N5 1060 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms