RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 CHST3Q7LGC8 479 aa15.65■□□□□ 0.1
HMGB1P24-201ENST00000611897 FTOQ9C0B1 505 aaKnown RBP eCLIP15.65■□□□□ 0.1
HMGB1P24-201ENST00000611897 CERS4Q9HA82 394 aa15.65■□□□□ 0.1
HMGB1P24-201ENST00000611897 DIAPH3Q9NSV4 1193 aa15.65■□□□□ 0.1
HMGB1P24-201ENST00000611897 PNMA2Q9UL42 364 aa15.65■□□□□ 0.1
HMGB1P24-201ENST00000611897 WDR19Q8NEZ3 1342 aa15.65■□□□□ 0.1
HMGB1P24-201ENST00000611897 PRRC2BQ5JSZ5 2229 aaKnown RBP15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 TET1Q8NFU7 2136 aa15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 B4DLN1 442 aa15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 ZNF213O14771 459 aa15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 KDM4AO75164 1064 aa15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 ARIH2O95376 493 aa15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 MRPL12P52815 198 aaKnown RBP15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 MFAP1P55081 439 aaKnown RBP15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 SKIV2LQ15477 1246 aaKnown RBP15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 CDC37Q16543 378 aaPredicted RBP15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 GPATCH4Q5T3I0 446 aaKnown RBP15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 CWC27Q6UX04 472 aaKnown RBP15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 SEPT14Q6ZU15 432 aa15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 PNMA1Q8ND90 353 aa15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 KAT14Q9H8E8 782 aa15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 TCF20Q9UGU0 1960 aaKnown RBP15.64■□□□□ 0.09
HMGB1P24-201ENST00000611897 LOC102724159A0A0B4J2E5 919 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 RBM47A0AV96 593 aaKnown RBP15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 B4E1Z4 1266 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 NKRFO15226 690 aaKnown RBP eCLIP15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 CA3P07451 260 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 PCP11498 1178 aaKnown RBP15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 ACTN1P12814 892 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 SDSP20132 328 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 PWP2Q15269 919 aaKnown RBP15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 IQCA1Q86XH1 822 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 RETREG2Q8NC44 543 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 DNERQ8NFT8 737 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 YTHDC1Q96MU7 727 aaKnown RBP15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 TTC14Q96N46 770 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 VAT1LQ9HCJ6 419 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 PCDHA11Q9Y5I1 949 aa15.63■□□□□ 0.09
HMGB1P24-201ENST00000611897 TNFRSF10AO00220 468 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 RFXAPO00287 272 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 PFKMP08237 780 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 SNHG28P0DPA3 235 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 EDNRBP24530 442 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 TMEM67Q5HYA8 995 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 ADAMTS19Q8TE59 1207 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 AFG1LQ8WV93 481 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 TBC1D5Q92609 795 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 KIAA1217Q5T5P2 1943 aa15.62■□□□□ 0.09
HMGB1P24-201ENST00000611897 REV3LO60673 3130 aa15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 EIF2AK2P19525 551 aaKnown RBP15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 MRPS5P82675 430 aaKnown RBP15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 BFSP2Q13515 415 aa15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 LY6KQ17RY6 165 aa15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 NFRKBQ6P4R8 1299 aa15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 ADGRF4Q8IZF3 695 aa15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 ATXN2LQ8WWM7 1075 aaKnown RBP15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 VWCEQ96DN2 955 aa15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 ASB2Q96Q27 587 aa15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 TAAR1Q96RJ0 339 aa15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 ABCB11O95342 1321 aa15.61■□□□□ 0.09
HMGB1P24-201ENST00000611897 A6NJR5 290 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 SORBS3O60504 671 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 KPNA6O60684 536 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 GH1P01241 217 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 MMP3P08254 477 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 PTGISQ16647 500 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 QRICH1Q2TAL8 776 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 CHD1LQ86WJ1 897 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 DGKHQ86XP1 1220 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 SYTL5Q8TDW5 730 aaPredicted RBP15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 ARNTL2Q8WYA1 636 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 UHRF1Q96T88 793 aaPredicted RBP15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 RMDN3Q96TC7 470 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 RWDD1Q9H446 243 aaPredicted RBP15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 COL20A1Q9P218 1284 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 MYH7BA7E2Y1 1941 aa15.6■□□□□ 0.09
HMGB1P24-201ENST00000611897 MUC3AQ02505 3323 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 RBAK-RBAKDNI3L0D1 243 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 GTPBP6O43824 516 aaPredicted RBP15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 CFBP00751 764 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 PARP1P09874 1014 aaKnown RBP15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 IQCF3P0C7M6 154 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 RFC2P35250 354 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 KCNJ6P48051 423 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 ASPRV1Q53RT3 343 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 ARHGEF16Q5VV41 709 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 FBXO11Q86XK2 927 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 PLEKHM2Q8IWE5 1019 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 ENAHQ8N8S7 591 aaPredicted RBP15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 NSUN6Q8TEA1 469 aaKnown RBP15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 NECAB3Q96P71 396 aaPredicted RBP15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 ZSCAN10Q96SZ4 725 aaPredicted RBP15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 SLC9A7Q96T83 725 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 UBAC1Q9BSL1 405 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 ALG1Q9BT22 464 aa15.59■□□□□ 0.09
HMGB1P24-201ENST00000611897 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
HMGB1P24-201ENST00000611897 TFF2Q03403 129 aa15.58■□□□□ 0.08
HMGB1P24-201ENST00000611897 ARHGAP1Q07960 439 aa15.58■□□□□ 0.08
HMGB1P24-201ENST00000611897 STXBP2Q15833 593 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms